gi|325688684|ref|AEXV00000000.1| Streptococcus sanguinis SK72 , whole genome shotgun .2364553, gc%: 43.31%
REGION2
REGION_LENGTH35.5Kb
COMPLETENESS(score)questionable(90)
SPECIFIC_KEYWORDrecombinase,lysin,head,capsid,portal,terminase
REGION_POSITION1275920-1311517
TRNA_NUM0
TOTAL_PROTEIN_NUM28
PHAGE_HIT_PROTEIN_NUM22
HYPOTHETICAL_PROTEIN_NUM4
PHAGE+HYPO_PROTEIN_PERCENTAGE92.8%
BACTERIAL_PROTEIN_NUM2
ATT_SITE_SHOWUPyes
PHAGE_SPECIES_NUM14
MOST_COMMON_PHAGE_NAME(hit_genes_count)PHAGE_Strept_PH10(8)
PHAGE_Geobac_virus_E2(6)
PHAGE_Geobac_GBSV1(6)
PHAGE_Lactoc_bIL285(5)
PHAGE_Bacill_virus_1(5)
PHAGE_Strept_SMP(3)
PHAGE_Bacill_phIS3501(2)
PHAGE_Burkho_KS9(2)
PHAGE_Entero_phiFL3A(2)
PHAGE_Burkho_phiE125(2)
PHAGE_Psychr_pOW20_A(1)
PHAGE_Bacill_WBeta(1)
PHAGE_Lactob_JCL1032(1)
PHAGE_Bacill_Fah(1)
PHAGE_Pseudo_vB_PaeS_PMG1(1)
PHAGE_Entero_mEp235(1)
PHAGE_Klebsi_phiKO2(1)
PHAGE_Azospi_Cd(1)
PHAGE_Strept_SM1(1)
PHAGE_Xantho_Xp10(1)
PHAGE_Nocard_NBR1(1)
PHAGE_Bacill_phBC6A51(1)
PHAGE_Parame_bursaria_Chlorella_virus_FR483(1)
PHAGE_Strept_EJ_1(1)
PHAGE_Lactob_LF1(1)
PHAGE_Entero_phiP27(1)
PHAGE_Strept_phiNJ2(1)
PHAGE_Bacill_BtCS33(1)
PHAGE_Strept_DT1(1)
PHAGE_Bacill_Gamma(1)
PHAGE_Burkho_phi644_2(1)
PHAGE_Amsact_moorei_entomopoxvirus__L_(1)
PHAGE_Strept_PH15(1)
PHAGE_Bacill_phi105(1)
PHAGE_Acanth_turfacea_Chlorella_virus_1(1)
PHAGE_Rhizob_16_3(1)
PHAGE_Bacill_Cherry(1)
PHAGE_Pseudo_D3(1)
PHAGE_Clostr_phiCTP1(1)
PHAGE_Plankt_PaV_LD(1)
PHAGE_Entero_phiEf11(1)
PHAGE_Lister_B025(1)
PHAGE_Clostr_phiCD27(1)
PHAGE_Lister_2389(1)
PHAGE_Yersin_PY54(1)
PHAGE_Shigel_SfII(1)
PHAGE_Entero_phiFL4A(1)
PHAGE_Burkho_phi1026b(1)
PHAGE_Lactob_johnsonii_prophage_Lj771(1)
PHAGE_Lister_LP_030_2(1)
PHAGE_Clostr_vB_CpeS_CP51(1)
FIRST_MOST_COMMON_PHAGE_NUM8
FIRST_MOST_COMMON_PHAGE_PERCENTAGE28.57%
GC_PERCENTAGE39.79%
Legend:
REGION: the number assigned to the region
REGION_LENGTH: the length of the sequence of that region (in bp)
PREDICT_INTACT_OR_INCOMPLETE (score): a prediction of whether the region contains an intact or incomplete prophage based on the above criteria (with score in brackets)
SPECIFIC_KEYWORD: the specific phage-related keyword(s) found in protein name(s) in the region
REGION_POSITION: the start and end positions of the region on the bacterial chromosome
TRNA_NUM: the number of tRNA genes present in the region
TOTAL_PROTEIN_NUM: the number of ORFs present in the region
PHAGE_HIT_PROTEIN_NUM: the number of proteins in the region with matches in the phage protein database
HYPOTHETICAL_PROTEIN_NUM: the number of hypothetical proteins in the region without a match in the database
PHAGE+HYPO_PROTEIN_PERCENTAGE: the combined percentage of phage proteins and hypothetical proteins in the region
BACTERIAL_PROTEIN_NUM: the number of proteins in the region with matches in the nrfilt database
ATT_SITE_SHOWUP: the putative phage attachment site
PHAGE_SPECIES_NUM: the number of different phages that have similar proteins to those in the region
MOST_COMMON_PHAGE_NAME: the phage with the highest number of proteins most similar to those in the region
MOST_COMMON_PHAGE_NUM: the number of phages with the highest number of proteins most similar to those in the region
MOST_COMMON_PHAGE_PERCENTAGE: the percentage of proteins in PHAGE_HIT_PROTEIN_NUM that are most similar to MOST_COMMON_PHAGE_NAME proteins
GC_PERCENTAGE: the percentage of gc nucleotides of the region