gi|322679305|ref|AETC00000000.1| Salmonella enterica subsp. enterica serovar Montevideo str. 366867 .4660054, gc%: 52.18%
REGION1
REGION_LENGTH53.1Kb
COMPLETENESS(score)intact(150)
SPECIFIC_KEYWORDintegrase,tail,head,portal,terminase,lysis
REGION_POSITION662285-715482
TRNA_NUM0
TOTAL_PROTEIN_NUM84
PHAGE_HIT_PROTEIN_NUM78
HYPOTHETICAL_PROTEIN_NUM6
PHAGE+HYPO_PROTEIN_PERCENTAGE100%
BACTERIAL_PROTEIN_NUM0
ATT_SITE_SHOWUPyes
PHAGE_SPECIES_NUM27
MOST_COMMON_PHAGE_NAME(hit_genes_count)PHAGE_Salmon_vB_SosS_Oslo(35)
PHAGE_Entero_ES18(32)
PHAGE_Salmon_SPN3UB(26)
PHAGE_Salmon_vB_SemP_Emek(16)
PHAGE_Pseudo_phi297(13)
PHAGE_Entero_P22(12)
PHAGE_Salmon_c341(11)
PHAGE_Salmon_ST160(11)
PHAGE_Salmon_epsilon34(11)
PHAGE_Salmon_SPN9CC(10)
PHAGE_Entero_ST64T(10)
PHAGE_Salmon_SE1(8)
PHAGE_Entero_mEp235(7)
PHAGE_Cronob_ENT47670(7)
PHAGE_Entero_ST104(7)
PHAGE_Entero_mEpX1(5)
PHAGE_Escher_HK75(5)
PHAGE_Salmon_E1(5)
PHAGE_Entero_HK633(5)
PHAGE_Entero_HK629(4)
PHAGE_Entero_mEp234(4)
PHAGE_Entero_mEp213(4)
PHAGE_Erwini_phiEt88(4)
PHAGE_Gifsy_1(3)
PHAGE_Gifsy_2(3)
PHAGE_Stx2_c_II(3)
PHAGE_Entero_cdtI(3)
PHAGE_Stx1_converting(3)
PHAGE_Entero_HK022(3)
PHAGE_Entero_HK106(3)
PHAGE_Entero_c_1(3)
PHAGE_Yersin_PY54(3)
PHAGE_Salmon_ST64B(2)
PHAGE_Entero_IME10(2)
PHAGE_Entero_HK225(2)
PHAGE_Entero_2008(2)
PHAGE_Entero_HK446(2)
PHAGE_Xantho_Xp10(2)
PHAGE_Marino_P12026(2)
PHAGE_Salmon_1(2)
PHAGE_Acinet_AP22(2)
PHAGE_Xantho_Xop411(2)
PHAGE_Entero_mEpX2(2)
PHAGE_Brucel_Tb(1)
PHAGE_Entero_Sf6(1)
PHAGE_Cronob_vB_CsaM_GAP32(1)
PHAGE_Entero_T7(1)
PHAGE_Sodali_1(1)
PHAGE_Klebsi_KP15(1)
PHAGE_Escher_Cba120(1)
PHAGE_Entero_RB16(1)
PHAGE_Salmon_SSU5(1)
PHAGE_Entero_N15(1)
PHAGE_Entero_HK97(1)
PHAGE_Entero_JL1(1)
PHAGE_Entero_HK620(1)
PHAGE_Entero_13a(1)
PHAGE_Pseudo_D3(1)
PHAGE_Entero_Sakai(1)
PHAGE_Salmon_SPN1S(1)
PHAGE_Klebsi_JD001(1)
PHAGE_Klebsi_phiKO2(1)
PHAGE_Entero_mEp390(1)
PHAGE_Salmon_7_11(1)
PHAGE_Entero_4795(1)
PHAGE_Entero_HK544(1)
PHAGE_Lactob_LP65(1)
PHAGE_Yersin_phiA1122(1)
PHAGE_Entero_HK140(1)
PHAGE_Cronob_vB_CsaM_GAP161(1)
PHAGE_Escher_PhaxI(1)
PHAGE_Vibrio_ICP1(1)
PHAGE_Stx2_c_1717(1)
PHAGE_Entero_mEp237(1)
PHAGE_Salmon_SFP10(1)
PHAGE_Salmon_SKML_39(1)
PHAGE_Entero_phiEco32(1)
PHAGE_Entero_vB_EcoS_Rogue1(1)
PHAGE_Entero_phiV10(1)
PHAGE_Entero_N4(1)
PHAGE_Salmon_ViI(1)
PHAGE_Klebsi_KP27(1)
PHAGE_Entero_HK630(1)
PHAGE_Entero_epsilon15(1)
FIRST_MOST_COMMON_PHAGE_NUM35
FIRST_MOST_COMMON_PHAGE_PERCENTAGE41.66%
GC_PERCENTAGE47.77%
Legend:
REGION: the number assigned to the region
REGION_LENGTH: the length of the sequence of that region (in bp)
PREDICT_INTACT_OR_INCOMPLETE (score): a prediction of whether the region contains an intact or incomplete prophage based on the above criteria (with score in brackets)
SPECIFIC_KEYWORD: the specific phage-related keyword(s) found in protein name(s) in the region
REGION_POSITION: the start and end positions of the region on the bacterial chromosome
TRNA_NUM: the number of tRNA genes present in the region
TOTAL_PROTEIN_NUM: the number of ORFs present in the region
PHAGE_HIT_PROTEIN_NUM: the number of proteins in the region with matches in the phage protein database
HYPOTHETICAL_PROTEIN_NUM: the number of hypothetical proteins in the region without a match in the database
PHAGE+HYPO_PROTEIN_PERCENTAGE: the combined percentage of phage proteins and hypothetical proteins in the region
BACTERIAL_PROTEIN_NUM: the number of proteins in the region with matches in the nrfilt database
ATT_SITE_SHOWUP: the putative phage attachment site
PHAGE_SPECIES_NUM: the number of different phages that have similar proteins to those in the region
MOST_COMMON_PHAGE_NAME: the phage with the highest number of proteins most similar to those in the region
MOST_COMMON_PHAGE_NUM: the number of phages with the highest number of proteins most similar to those in the region
MOST_COMMON_PHAGE_PERCENTAGE: the percentage of proteins in PHAGE_HIT_PROTEIN_NUM that are most similar to MOST_COMMON_PHAGE_NAME proteins
GC_PERCENTAGE: the percentage of gc nucleotides of the region