gi|322657162|ref|AESQ00000000.1| Salmonella enterica subsp. enterica serovar Montevideo str. .4742895, gc%: 52.07%
REGION3
REGION_LENGTH43.1Kb
COMPLETENESS(score)intact(150)
SPECIFIC_KEYWORDintegrase,capsid,tail,lysis,lysin,plate
REGION_POSITION1194174-1237355
TRNA_NUM0
TOTAL_PROTEIN_NUM50
PHAGE_HIT_PROTEIN_NUM49
HYPOTHETICAL_PROTEIN_NUM1
PHAGE+HYPO_PROTEIN_PERCENTAGE100%
BACTERIAL_PROTEIN_NUM0
ATT_SITE_SHOWUPyes
PHAGE_SPECIES_NUM6
MOST_COMMON_PHAGE_NAME(hit_genes_count)PHAGE_Entero_2(42)
PHAGE_Salmon_RE_2010(39)
PHAGE_Erwini_ENT90(27)
PHAGE_Entero_PsP3(18)
PHAGE_Yersin_413C(12)
PHAGE_Entero_P2(8)
PHAGE_Ralsto_phiRSA1(5)
PHAGE_Burkho_KS5(4)
PHAGE_Escher_D108(3)
PHAGE_Entero_P1(3)
PHAGE_Burkho_KS14(3)
PHAGE_Entero_Mu(3)
PHAGE_Salmon_ST64B(2)
PHAGE_Aeromo_phiO18P(2)
PHAGE_Pseudo_phiCTX(2)
PHAGE_Salmon_SPN3UB(2)
PHAGE_Entero_P4(1)
PHAGE_Cyanop_KBS_M_1A(1)
PHAGE_Pseudo_PAJU2(1)
PHAGE_Erwini_phiEaH2(1)
PHAGE_Entero_mEpX1(1)
PHAGE_Entero_HK106(1)
PHAGE_Pasteu_F108(1)
PHAGE_Salmon_7_11(1)
PHAGE_Sodali_phiSG1(1)
PHAGE_Yersin_PY54(1)
PHAGE_Bacill_SPBc2(1)
PHAGE_Aggreg_S1249(1)
PHAGE_Entero_phiP27(1)
PHAGE_Salmon_SSU5(1)
FIRST_MOST_COMMON_PHAGE_NUM43
FIRST_MOST_COMMON_PHAGE_PERCENTAGE84%
GC_PERCENTAGE49.21%
Legend:
REGION: the number assigned to the region
REGION_LENGTH: the length of the sequence of that region (in bp)
PREDICT_INTACT_OR_INCOMPLETE (score): a prediction of whether the region contains an intact or incomplete prophage based on the above criteria (with score in brackets)
SPECIFIC_KEYWORD: the specific phage-related keyword(s) found in protein name(s) in the region
REGION_POSITION: the start and end positions of the region on the bacterial chromosome
TRNA_NUM: the number of tRNA genes present in the region
TOTAL_PROTEIN_NUM: the number of ORFs present in the region
PHAGE_HIT_PROTEIN_NUM: the number of proteins in the region with matches in the phage protein database
HYPOTHETICAL_PROTEIN_NUM: the number of hypothetical proteins in the region without a match in the database
PHAGE+HYPO_PROTEIN_PERCENTAGE: the combined percentage of phage proteins and hypothetical proteins in the region
BACTERIAL_PROTEIN_NUM: the number of proteins in the region with matches in the nrfilt database
ATT_SITE_SHOWUP: the putative phage attachment site
PHAGE_SPECIES_NUM: the number of different phages that have similar proteins to those in the region
MOST_COMMON_PHAGE_NAME: the phage with the highest number of proteins most similar to those in the region
MOST_COMMON_PHAGE_NUM: the number of phages with the highest number of proteins most similar to those in the region
MOST_COMMON_PHAGE_PERCENTAGE: the percentage of proteins in PHAGE_HIT_PROTEIN_NUM that are most similar to MOST_COMMON_PHAGE_NAME proteins
GC_PERCENTAGE: the percentage of gc nucleotides of the region