gi|239823111|ref|ACQA01000001.1| Ochrobactrum intermedium LMG 3301 chromosome I VBI00028_1, whole .2604449, gc%: 58.32%
REGION1
REGION_LENGTH40.8Kb
COMPLETENESS(score)intact(150)
SPECIFIC_KEYWORDtail,plate,virion,capsid,portal,transposase
REGION_POSITION1796867-1837707
TRNA_NUM1
TOTAL_PROTEIN_NUM53
PHAGE_HIT_PROTEIN_NUM40
HYPOTHETICAL_PROTEIN_NUM11
PHAGE+HYPO_PROTEIN_PERCENTAGE96.2%
BACTERIAL_PROTEIN_NUM2
ATT_SITE_SHOWUPno
PHAGE_SPECIES_NUM21
MOST_COMMON_PHAGE_NAME(hit_genes_count)PHAGE_Vibrio_12B12_NC_021070(10)
PHAGE_Rhodob_RC1_NC_020839(7)
PHAGE_Escher_ep3_NC_025430(6)
PHAGE_Rhodob_RcapMu_NC_016165(6)
PHAGE_Burkho_BcepMu_NC_005882(6)
PHAGE_Rhizob_RR1_B_NC_021557(6)
PHAGE_Rhodov_RS1_NC_020866(6)
PHAGE_Pseudo_B3_NC_006548(6)
PHAGE_Escher_D108_NC_013594(5)
PHAGE_Burkho_phiE255_NC_009237(5)
PHAGE_Burkho_KS10_NC_011216(4)
PHAGE_Entero_Mu_NC_000929(3)
PHAGE_Stenot_Smp131_NC_023588(3)
PHAGE_Pseudo_PPpW_3_NC_023006(3)
PHAGE_Burkho_KS14_NC_015273(3)
PHAGE_Pseudo_MP48_NC_024782(3)
PHAGE_Pseudo_JBD24_NC_020203(3)
PHAGE_Sinorh_PBC5_NC_003324(2)
PHAGE_Pseudo_vB_PaeS_PAO1_Ab30_NC_026601(2)
PHAGE_Salmon_SP_004_NC_021774(2)
PHAGE_Halomo_phiHAP_1_NC_010342(2)
PHAGE_Pseudo_PA1/KOR/2010_NC_023700(2)
PHAGE_Entero_PsP3_NC_005340(2)
PHAGE_Pseudo_phiCTX_NC_003278(2)
PHAGE_Entero_fiAA91_ss_NC_022750(2)
PHAGE_Haemop_SuMu_NC_019455(2)
PHAGE_Salmon_RE_2010_NC_019488(2)
PHAGE_Pseudo_D3112_NC_005178(2)
PHAGE_Salmon_ST64B_NC_004313(1)
PHAGE_Staphy_S25_4_NC_022918(1)
PHAGE_Mycoba_Qyrzula_NC_008204(1)
PHAGE_Staphy_Sb_1_NC_023009(1)
PHAGE_Arthro_vB_ArtM_ArV1_NC_026606(1)
PHAGE_Yersin_L_413C_NC_004745(1)
PHAGE_Vibrio_VP882_NC_009016(1)
PHAGE_Pseudo_MP42_NC_018274(1)
PHAGE_Ostreo_2_NC_014789(1)
PHAGE_Ostreo_OlV5_NC_020852(1)
PHAGE_Bacill_SPO1_NC_011421(1)
PHAGE_Staphy_SA11_NC_019511(1)
PHAGE_Staphy_vB_SauM_Remus_NC_022090(1)
PHAGE_Mycoba_Rosebush_NC_004684(1)
PHAGE_Ostreo_virus_OsV5_NC_010191(1)
PHAGE_Staphy_S25_3_NC_022920(1)
PHAGE_Staphy_MCE_2014_NC_025416(1)
PHAGE_Ostreo_tauri_virus_1_NC_013288(1)
PHAGE_Mycoba_RhynO_NC_023609(1)
PHAGE_Erwini_ENT90_NC_019932(1)
PHAGE_Vibrio_vB_VpaM_MAR_NC_019722(1)
PHAGE_Mycoba_AnnaL29_NC_022087(1)
PHAGE_Staphy_vB_SauM_Romulus_NC_020877(1)
PHAGE_Vibrio_VHML_NC_004456(1)
PHAGE_Stenot_S1_NC_011589(1)
PHAGE_Rhizob_vB_RleM_PPF1_NC_025427(1)
PHAGE_Bathyc_BpV1_NC_014765(1)
PHAGE_Coryne_P1201_NC_009816(1)
PHAGE_Staphy_Team1_NC_025417(1)
PHAGE_Entero_P88_NC_026014(1)
PHAGE_Entero_Fels_2_NC_010463(1)
PHAGE_Burkho_phiE125_NC_003309(1)
PHAGE_Mesorh_phagevB_MloP_Lo5R7ANS_NC_025431(1)
PHAGE_Burkho_phi1026b_NC_005284(1)
PHAGE_Bacill_CampHawk_NC_022761(1)
PHAGE_Entero_P2_NC_001895(1)
FIRST_MOST_COMMON_PHAGE_NUM10
FIRST_MOST_COMMON_PHAGE_PERCENTAGE18.86%
GC_PERCENTAGE58.17%
Legend:
REGION: the number assigned to the region
REGION_LENGTH: the length of the sequence of that region (in bp)
PREDICT_INTACT_OR_INCOMPLETE (score): a prediction of whether the region contains an intact or incomplete prophage based on the above criteria (with score in brackets)
SPECIFIC_KEYWORD: the specific phage-related keyword(s) found in protein name(s) in the region
REGION_POSITION: the start and end positions of the region on the bacterial chromosome
TRNA_NUM: the number of tRNA genes present in the region
TOTAL_PROTEIN_NUM: the number of ORFs present in the region
PHAGE_HIT_PROTEIN_NUM: the number of proteins in the region with matches in the phage protein database
HYPOTHETICAL_PROTEIN_NUM: the number of hypothetical proteins in the region without a match in the database
PHAGE+HYPO_PROTEIN_PERCENTAGE: the combined percentage of phage proteins and hypothetical proteins in the region
BACTERIAL_PROTEIN_NUM: the number of proteins in the region with matches in the nrfilt database
ATT_SITE_SHOWUP: the putative phage attachment site
PHAGE_SPECIES_NUM: the number of different phages that have similar proteins to those in the region
MOST_COMMON_PHAGE_NAME: the phage with the highest number of proteins most similar to those in the region
MOST_COMMON_PHAGE_NUM: the number of phages with the highest number of proteins most similar to those in the region
MOST_COMMON_PHAGE_PERCENTAGE: the percentage of proteins in PHAGE_HIT_PROTEIN_NUM that are most similar to MOST_COMMON_PHAGE_NAME proteins
GC_PERCENTAGE: the percentage of gc nucleotides of the region