Streptococcus pneumoniae GA17328, whole genome shotgun sequencing [asmbl_id: NC_000000].2207992, GC%: 39.72%



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            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 75 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
110125..10136 attL    TTTTGTGTTATA 0.0 Click
2complement(11045..11251) PROPHAGE_Staphy_N315: transposase; SPAR49_0009; phage(gi15927655) 6e-05 Click
3complement(11585..11788) adenylosuccinate synthetase; SPAR49_0011 0.0 Click
412108..12344 recombination regulator RecX; SPAR49_0012 0.0 Click
512575..13861 PHAGE_Megavi_lba_NC_020232: adenylosuccinate synthetase; SPAR49_0013; phage(gi448826112) 5e-72 Click
6complement(14103..15182) PHAGE_Strept_PH10_NC_012756: hypothetical protein PH10_gp01; SPAR49_0014; phage(gi238821318) 0.0 Click
7complement(15136..15249) PHAGE_Strept_PH10_NC_012756: hypothetical protein PH10_gp01; SPAR49_0015; phage(gi238821318) 2e-14 Click
8complement(15424..16236) PHAGE_Staphy_P954_NC_013195: hypothetical protein; SPAR49_0016; phage(gi257136360) 2e-11 Click
9complement(16274..16657) PHAGE_Strept_PH10_NC_012756: hypothetical protein PH10_gp03; SPAR49_0017; phage(gi238821320) 1e-25 Click
10complement(16670..17035) PHAGE_Strept_PH10_NC_012756: hypothetical protein PH10_gp04; SPAR49_0018; phage(gi238821321) 9e-28 Click
11complement(17341..17823) putative membrane protein; SPAR49_0019 0.0 Click
1217878..18081 PHAGE_Strept_phi3396_NC_009018: hypothetical protein phi3396_06; SPAR49_0020; phage(gi126011068) 7e-18 Click
1318355..18489 hypothetical protein; SPAR49_0021 0.0 Click
1418501..18629 PHAGE_Strept_SM1_NC_004996: gp13; SPAR49_0022; phage(gi32469444) 3e-15 Click
15complement(18592..19173) PHAGE_Strept_SM1_NC_004996: gp14; SPAR49_0023; phage(gi32469445) 3e-104 Click
1619324..20037 PHAGE_Strept_PH10_NC_012756: hypothetical protein PH10_gp08; SPAR49_0024; phage(gi238821325) 2e-131 Click
1720050..20307 PHAGE_Strept_PH10_NC_012756: hypothetical protein PH10_gp09; SPAR49_0025; phage(gi238821326) 7e-41 Click
1820355..20370 attL    ACTATATTATAGCACA 0.0 Click
1920393..20713 PHAGE_Strept_EJ_1_NC_005294: hypothetical protein EJ-1p17; SPAR49_0026; phage(gi39653691) 2e-39 Click
2020729..21022 PHAGE_Strept_SM1_NC_004996: gp18; SPAR49_0027; phage(gi32469449) 5e-07 Click
2121015..21842 PHAGE_Strept_SM1_NC_004996: gp19; SPAR49_0028; phage(gi32469450) 8e-67 Click
2222111..22752 PHAGE_Strept_SM1_NC_004996: gp21; SPAR49_0029; phage(gi32469452) 9e-105 Click
2322961..23188 PHAGE_Strept_PH10_NC_012756: hypothetical protein PH10_gp15; SPAR49_0030; phage(gi238821332) 1e-15 Click
2423315..23482 hypothetical protein; SPAR49_0031 0.0 Click
2523469..23678 hypothetical protein; SPAR49_0032 0.0 Click
2623653..23967 PHAGE_Strept_phiBHN167_NC_022791: phage protein; SPAR49_0033; phage(gi557745659) 3e-57 Click
2723969..24493 PHAGE_Strept_EJ_1_NC_005294: hypothetical protein EJ-1p26; SPAR49_0034; phage(gi39653700) 2e-33 Click
2824640..24780 PHAGE_Strept_phiBHN167_NC_022791: phage protein; SPAR49_0035; phage(gi557745657) 9e-20 Click
2924780..24953 PHAGE_Strept_MM1_NC_003050: hypothetical protein MM1p25; SPAR49_0036; phage(gi15088766) 5e-24 Click
3025706..26047 PHAGE_Strept_PH10_NC_012756: hypothetical protein PH10_gp27; SPAR49_0037; phage(gi238821344) 2e-06 Click
3126156..26698 PHAGE_Strept_PH10_NC_012756: hypothetical protein PH10_gp28; SPAR49_0038; phage(gi238821345) 6e-63 Click
3227239..27445 PHAGE_Lactoc_P008_NC_008363: putative HNH endonuclease; SPAR49_0039; phage(gi115304213) 4e-09 Click
3327581..28066 hypothetical protein; SPAR49_0040 0.0 Click
3428059..29771 PHAGE_Leucon_Lmd1_NC_018273: putative terminase large subunit; SPAR49_0041; phage(gi399528546) 3e-65 Click
3529996..30922 PHAGE_Lactoc_P008_NC_008363: putative portal protein; SPAR49_0042; phage(gi115304214) 3e-16 Click
3630969..31511 PHAGE_Entero_phiP27_NC_003356: putative prohead protease; SPAR49_0043; phage(gi18249903) 2e-15 Click
3731546..32778 PHAGE_Lactoc_bIL170_NC_001909: putative minor structural protein; SPAR49_0044; phage(gi9630572) 2e-13 Click
3832804..33139 hypothetical protein; SPAR49_0045 0.0 Click
3933136..33441 hypothetical protein; SPAR49_0046 0.0 Click
4033612..33788 hypothetical protein; SPAR49_0047 0.0 Click
4133796..34119 PHAGE_Strept_PH10_NC_012756: hypothetical protein PH10_gp40; SPAR49_0048; phage(gi238821357) 2e-10 Click
4234309..34800 PHAGE_Lactoc_c2_NC_001706: major tail shaft protein; SPAR49_0049; phage(gi9628689) 1e-05 Click
4334802..35278 hypothetical protein; SPAR49_0050 0.0 Click
4435317..35445 hypothetical protein; SPAR49_0051 0.0 Click
4535465..38203 PHAGE_Strept_PH10_NC_012756: hypothetical protein PH10_gp44; SPAR49_0052; phage(gi238821361) 0.0 Click
4638200..38922 PHAGE_Strept_PH10_NC_012756: hypothetical protein PH10_gp45; SPAR49_0053; phage(gi238821362) 2e-94 Click
4739013..41862 PHAGE_Strept_PH10_NC_012756: hypothetical protein PH10_gp46; SPAR49_0054; phage(gi238821363) 0.0 Click
4842033..43319 PHAGE_Klebsi_phiKO2_NC_005857: Gp21; SPAR49_0055; phage(gi46402107) 3e-29 Click
4943520..46681 PHAGE_Strept_PH10_NC_012756: hypothetical protein PH10_gp46; SPAR49_0056; phage(gi238821363) 3e-87 Click
5046678..46794 PHAGE_Strept_PH10_NC_012756: hypothetical protein PH10_gp46; SPAR49_0057; phage(gi238821363) 1e-09 Click
5146847..46978 PHAGE_Strept_PH10_NC_012756: hypothetical protein PH10_gp47; SPAR49_0058; phage(gi238821364) 8e-16 Click
5246981..47331 PHAGE_Strept_SMP_NC_008721: hypothetical protein; SPAR49_0059; phage(gi119953750) 9e-44 Click
5347341..47757 PHAGE_Strept_MM1_NC_003050: putative holin 1; SPAR49_0060; phage(gi15088791) 4e-69 Click
5447761..48093 PHAGE_Strept_MM1_NC_003050: putative holin 2; SPAR49_0061; phage(gi15088792) 4e-53 Click
5548097..49053 PHAGE_Strept_phiBHN167_NC_022791: phage lytic amidase; SPAR49_0062; phage(gi557745681) 0.0 Click
56complement(49190..49369) PHAGE_Strept_PH10_NC_012756: hypothetical protein PH10_gp52; SPAR49_0063; phage(gi238821369) 4e-25 Click
5749939..50406 PHAGE_Microm_MpV1_NC_014767: hypothetical protein; SPAR49_0064; phage(gi313768407) 2e-07 Click
5850431..50444 attL    TGTGATATAATAAA 0.0 Click
59complement(50615..51331) PHAGE_Strept_phiBHN167_NC_022791: phage integrase; SPAR49_0065; phage(gi557745680) 2e-133 Click
60complement(51463..51756) PHAGE_Strept_phiBHN167_NC_022791: phage integrase; SPAR49_0066; phage(gi557745680) 4e-50 Click
61complement(51834..52880) type I restriction enzyme R family protein; SPAR49_0067 0.0 Click
62complement(52897..53178) PHAGE_Strept_PH10_NC_012756: hypothetical protein PH10_gp03; SPAR49_0068; phage(gi238821320) 3e-26 Click
63complement(53290..53553) PHAGE_Mycoba_Fruitloop_NC_011288: gp41; SPAR49_0069; phage(gi206599921) 3e-07 Click
64complement(53553..53705) hypothetical protein; SPAR49_0070 0.0 Click
65complement(53786..54154) PHAGE_Strept_PH10_NC_012756: hypothetical protein PH10_gp04; SPAR49_0071; phage(gi238821321) 2e-35 Click
6654451..54582 hypothetical protein; SPAR49_0072 0.0 Click
6754872..55063 PHAGE_Strept_MM1_NC_003050: hypothetical protein MM1p05; SPAR49_0073; phage(gi15088748) 9e-26 Click
6855086..55289 hypothetical protein; SPAR49_0074 0.0 Click
69complement(55444..55611) PHAGE_Entero_P22_NC_002371: hypothetical protein P22gp16; SPAR49_0075; phage(gi9635553) 2e-06 Click
7055682..55996 PHAGE_Strept_phiBHN167_NC_022791: phage lytic amidase; SPAR49_0076; phage(gi557745681) 2e-59 Click
7156270..56713 PHAGE_Clostr_c_st_NC_007581: putative dUTPase; SPAR49_0077; phage(gi80159764) 3e-30 Click
7256715..57230 phosphoglycerate mutase family protein; SPAR49_0078 0.0 Click
7357343..58605 PHAGE_Bacill_W.Ph._NC_016563: gp46; SPAR49_0079; phage(gi371671106) 1e-06 Click
7458699..59175 carbonic anhydrase family protein; SPAR49_0080 0.0 Click
7559200..59859 putative membrane protein; SPAR49_0081 0.0 Click
7659852..59983 ribose-phosphate pyrophosphokinase; SPAR49_0082 0.0 Click
7760128..61096 PHAGE_Salmon_7_11_NC_015938: putative ribose-phosphate pyrophosphokinase; SPAR49_0083; phage(gi345461227) 2e-19 Click
7861188..61201 attR    TGTGATATAATAAA 0.0 Click
79complement(61218..61511) PROPHAGE_Staphy_N315: transposase; SPAR49_0084; phage(gi15927655) 8e-06 Click
8062663..62678 attR    ACTATATTATAGCACA 0.0 Click
8165980..65991 attR    TTTTGTGTTATA 0.0 Click

Region 2, total : 20 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1971810..971821 attL    AAAAATAAAAGT 0.0 Click
2981460..982050 PHAGE_Entero_RB69_NC_004928: Tk thymidine kinase; SPAR49_1063; phage(gi32453595) 8e-46 Click
3982067..982519 acetyltransferase family protein; SPAR49_1064 0.0 Click
4982529..983608 PHAGE_Mycoba_ScottMcG_NC_011269: gp204; SPAR49_1065; phage(gi203459047) 5e-06 Click
5983608..984447 PHAGE_Mythim_'L'_NC_021246: unknown similar to AMEV004; SPAR49_1066; phage(gi506497757) 5e-05 Click
6984431..985033 PHAGE_Pandor_salinus_NC_022098: tRNA threonylcarbamoyl adenosine biosynthesis; SPAR49_1067; phage(gi531037074) 1e-18 Click
7985047..985466 acetyltransferase family protein; SPAR49_1068 0.0 Click
8985527..986783 PHAGE_Aeromo_31_NC_007022: hypothetical protein PHG31p8; SPAR49_1069; phage(gi66391812) 3e-102 Click
9986919..987764 PHAGE_Clostr_phiC2_NC_009231: hypothetical protein phiC2p75; SPAR49_1070; phage(gi134287407) 5e-06 Click
10987785..988378 PHAGE_Bacill_MG_B1_NC_021336: morphogenesis protein; SPAR49_1071; phage(gi509141248) 3e-28 Click
11988506..989426 hypothetical protein; SPAR49_1072 0.0 Click
12989500..990543 PHAGE_Acanth_moumouvirus_NC_020104: SAM-dependent methyltransferase; SPAR49_1073; phage(gi441432344) 2e-10 Click
13990840..991130 23S rRNA (Uracil-5-)-methyltransferase RumA; SPAR49_1074 0.0 Click
14991868..992086 transcriptional regulator; SPAR49_1075 0.0 Click
15992479..993504 periplasmic binding family protein; SPAR49_1076 0.0 Click
16complement(993475..993720) hypothetical protein; SPAR49_1077 0.0 Click
17993734..994501 fecCD transport family protein; SPAR49_1078 0.0 Click
18994686..995507 fecCD transport family protein; SPAR49_1079 0.0 Click
19995507..996301 PHAGE_Amsact_moorei_entomopoxvirus__L__NC_002520: putative ATP-binding cassette transporter; SPAR49_1080; phage(gi9964444) 8e-16 Click
20997200..997355 hypothetical protein; SPAR49_1081 0.0 Click
21998039..998200 hypothetical protein; SPAR49_1082 0.0 Click
22998301..998312 attR    AAAAATAAAAGT 0.0 Click
23998383..999969 PHAGE_Deep_s_D6E_NC_019544: recombinase; SPAR49_1083; phage(gi423262352) 1e-34 Click

Region 3, total : 14 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
11992089..1992100 attL    AAAAAGCCCCAC 0.0 Click
2complement(1993345..1993917) PHAGE_Lactoc_bIL311_NC_002670: Orf14; SPAR49_2204; phage(gi13095672) 2e-08 Click
3complement(1993936..1994190) hypothetical protein; SPAR49_2205 0.0 Click
4complement(1994485..1994940) PHAGE_Strept_PH10_NC_012756: hypothetical protein PH10_gp27; SPAR49_2206; phage(gi238821344) 1e-08 Click
5complement(1994941..1995786) PHAGE_Strept_EJ_1_NC_005294: DnaC protein; SPAR49_2207; phage(gi39653686) 7e-35 Click
6complement(1995798..1996571) PHAGE_Strept_phi3396_NC_009018: putative replication protein; SPAR49_2208; phage(gi126011075) 2e-44 Click
7complement(1996913..1997143) putative DNA-binding phage protein; SPAR49_2209 0.0 Click
8complement(1997262..1997528) hypothetical protein; SPAR49_2210 0.0 Click
9complement(1997737..1997940) hypothetical protein; SPAR49_2211 0.0 Click
10complement(1998263..1998523) hypothetical protein; SPAR49_2212 0.0 Click
11complement(1998535..1999137) PHAGE_Lactoc_bIL311_NC_002670: Orf3; SPAR49_2213; phage(gi13095661) 1e-24 Click
12complement(1999605..1999757) PHAGE_Staphy_29_NC_007061: ORF049; SPAR49_2214; phage(gi66396236) 4e-10 Click
131999999..2000715 PHAGE_Strept_EJ_1_NC_005294: cI repressor; SPAR49_2215; phage(gi39653678) 5e-76 Click
142000731..2001270 PHAGE_Entero_phiFL4A_NC_013644: hypothetical protein; SPAR49_2216; phage(gi281416436) 2e-15 Click
152002123..2002134 attR    AAAAAGCCCCAC 0.0 Click
162002501..2003667 PHAGE_Lactoc_bIL311_NC_002670: integrase; SPAR49_2217; phage(gi13095659) 2e-59 Click