Streptococcus dysgalactiae subsp. equisimilis SK1250 [asmbl_id: NC_000000].2122515, GC%: 39.56%



Text file for download

            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 22 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1284529..284540 attL    AATATCTTATCA 0.0 Click
2284931..285929 PHAGE_Spirop_R8A2B: putative transposase; HMPREF9963_0281; phage(gi9626114) 2e-07 Click
3286011..286084 tRNA 0.0 Click
4286057..286075 attL    GTCGCAGGTTCGAATCCTG 0.0 Click
5complement(286172..286651) rRNA large subunit m3Psi methyltransferase RlmH; HMPREF9963_0283 0.0 Click
6286862..288085 PROPHAGE_Shewan_MR-1: serine protease; HMPREF9963_0284; phage(gi24375430) 2e-40 Click
7288174..288533 PHAGE_Rhodob_RcapMu: ParB-like nuclease; HMPREF9963_0285; phage(gi356870851) 1e-06 Click
8288530..288949 KorB domain protein; HMPREF9963_0286 0.0 Click
9289182..289370 chromosomal replication initiation domain protein; HMPREF9963_0287 0.0 Click
10289340..290536 PHAGE_Bacill_IEBH: DNA replication protein DnaC; HMPREF9963_0288; phage(gi197261519) 4e-07 Click
11290690..291826 PHAGE_Rhizob_3: p081; HMPREF9963_0289; phage(gi195546611) 3e-28 Click
12291900..292097 hypothetical protein; HMPREF9963_0290 0.0 Click
13292222..292596 PHAGE_Bacill_phBC6A51: Transcriptional regulator, MerR family; HMPREF9963_0291; phage(gi31415741) 8e-07 Click
14292720..293835 GTP-binding protein YchF; HMPREF9963_0292 0.0 Click
15293906..294475 aminoacyl-tRNA hydrolase; HMPREF9963_0293 0.0 Click
16294562..297978 PHAGE_Bacill_SPO1: gp19.5; HMPREF9963_0294; phage(gi209972934) 6e-06 Click
17297941..299446 polysaccharide biosynthesis protein; HMPREF9963_0295 0.0 Click
18299481..299753 S4 domain protein; HMPREF9963_0296 0.0 Click
19299740..300111 septum formation initiator; HMPREF9963_0297 0.0 Click
20300111..300233 hypothetical protein; HMPREF9963_0298 0.0 Click
21300246..301532 hypothetical protein; HMPREF9963_0299 0.0 Click
22301529..302815 PHAGE_Parame_FR483: hypothetical protein FR483_N404R; HMPREF9963_0300; phage(gi155370502) 1e-12 Click
23302820..303362 hypoxanthine phosphoribosyltransferase; HMPREF9963_0301 0.0 Click
24303384..305369 PROPHAGE_Escher_Sakai: ATP-dependent metalloprotease; HMPREF9963_0302; phage(gi15833311) 7e-150 Click
25305521..306912 amino acid permease; HMPREF9963_0303 0.0 Click
26complement(306986..308125) PHAGE_Spirop_R8A2B: putative transposase; HMPREF9963_0304; phage(gi9626114) 5e-14 Click
27314230..314248 attR    GTCGCAGGTTCGAATCCTG 0.0 Click
28315311..315322 attR    AATATCTTATCA 0.0 Click

Region 2, total : 16 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1892502..892513 attL    CAAAAAATAGTA 0.0 Click
2905319..906113 PHAGE_Tricho_2c: hypothetical protein TNAV2c_gp071; HMPREF9963_0962; phage(gi116326757) 4e-20 Click
3906138..906779 ribose/galactose isomerase; HMPREF9963_0963 0.0 Click
4906808..907809 carbohydrate kinase, PfkB family; HMPREF9963_0964 0.0 Click
5907814..908452 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; HMPREF9963_0965 0.0 Click
6908477..911686 PHAGE_Phthor_granulovirus: occlusion derived virus envelope protein 66; HMPREF9963_0966; phage(gi21686698) 6e-05 Click
7complement(911718..912083) hypothetical protein; HMPREF9963_0967 0.0 Click
8complement(912073..912966) putative phosphoesterase; HMPREF9963_0968 0.0 Click
9complement(913002..913355) PROPHAGE_Neisse_MC58: IS30 family transposase; HMPREF9963_0969; phage(gi15677611) 6e-09 Click
10complement(913407..914120) PROPHAGE_Escher_CFT073: transposase insF; HMPREF9963_0970; phage(gi26250329) 4e-36 Click
11complement(914264..914545) PHAGE_Lactob_phiAT3: putative transposase A; HMPREF9963_0971; phage(gi48697273) 3e-12 Click
12complement(914607..915200) PHAGE_Staphy_phiPV83: transposase; HMPREF9963_0972; phage(gi9635740) 2e-21 Click
13complement(915228..915353) conserved domain protein; HMPREF9963_0973 0.0 Click
14915683..915973 PHAGE_Lactob_phiAT3: putative transposase A; HMPREF9963_0974; phage(gi48697273) 5e-06 Click
15916009..916788 PHAGE_Lactob_phiAT3: putative transposase B; HMPREF9963_0975; phage(gi48697274) 1e-28 Click
16complement(916900..917175) PHAGE_Lactob_phiAT3: putative transposase A; HMPREF9963_0976; phage(gi48697273) 5e-12 Click
17917479..918123 PHAGE_Parame_FR483: hypothetical protein FR483_N177L; HMPREF9963_0977; phage(gi155370275) 2e-13 Click
18921772..921783 attR    CAAAAAATAGTA 0.0 Click

Region 3, total : 21 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
11602645..1602656 attL    GAAATTTTTTAA 0.0 Click
21605353..1605365 attL    TTTATTTGTCAAG 0.0 Click
31613019..1613798 PHAGE_Lactob_phiAT3: putative transposase B; HMPREF9963_1698; phage(gi48697274) 6e-28 Click
4complement(1613820..1614338) hypothetical protein; HMPREF9963_1699 0.0 Click
5complement(1614423..1615958) divergent AAA domain protein; HMPREF9963_1700 0.0 Click
6complement(1616040..1617695) PHAGE_Acanth_moumouvirus: DNA topoisomerase 1; HMPREF9963_1701; phage(gi441432186) 2e-25 Click
71617750..1617764 attL    TTTTTCCTCCTGTTT 0.0 Click
8complement(1617843..1620029) PHAGE_Yoka_poxvirus: truncated A-type inclusion protein; HMPREF9963_1702; phage(gi345107317) 1e-10 Click
9complement(1620007..1620243) hypothetical protein; HMPREF9963_1703 0.0 Click
10complement(1620256..1621737) hypothetical protein; HMPREF9963_1704 0.0 Click
11complement(1622144..1622923) PHAGE_Lactob_phiAT3: putative transposase B; HMPREF9963_1705; phage(gi48697274) 6e-28 Click
12complement(1622959..1623249) PHAGE_Lactob_phiAT3: putative transposase A; HMPREF9963_1706; phage(gi48697273) 5e-06 Click
13complement(1623297..1623701) TraG/TraD domain protein; HMPREF9963_1707 0.0 Click
14complement(1623800..1623985) hypothetical protein; HMPREF9963_1708 0.0 Click
151623989..1624003 attR    TTTTTCCTCCTGTTT 0.0 Click
16complement(1624170..1624877) PHAGE_Strept_PH10: hypothetical protein PH10_gp11; HMPREF9963_1709; phage(gi238821328) 9e-36 Click
17complement(1624990..1625517) PHAGE_Sputni_virophage: V12; HMPREF9963_1710; phage(gi195982543) 8e-05 Click
18complement(1625947..1627587) PHAGE_Phthor_granulovirus: hypothetical protein; HMPREF9963_1711; phage(gi21686697) 2e-10 Click
191627761..1627773 attR    TTTATTTGTCAAG 0.0 Click
20complement(1627901..1628275) hypothetical protein; HMPREF9963_1712 0.0 Click
21complement(1628362..1628778) PHAGE_Synech_S_CBS1: group2 RNA polymerase sigma factor; HMPREF9963_1713; phage(gi356870821) 6e-05 Click
22complement(1629071..1629424) bacterial regulatory protein, GntR family; HMPREF9963_1714 0.0 Click
23complement(1630031..1631587) putative membrane protein; HMPREF9963_1715 0.0 Click
24complement(1631660..1632289) PHAGE_Plankt_PaV_LD: ABC transporter; HMPREF9963_1716; phage(gi371496158) 4e-12 Click
25complement(1632400..1633017) transcriptional regulator, TetR family; HMPREF9963_1717 0.0 Click
26complement(1633088..1634902) PHAGE_Bacill_WBeta: putative site-specific recombinase; HMPREF9963_1718; phage(gi85701406) 1e-27 Click
271638164..1638175 attR    GAAATTTTTTAA 0.0 Click