Vibrio cholerae O1 str. Amazonia , whole genome shotgun [asmbl_id: NC_000000].3925563, GC%: 47.65%



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            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 34 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1135449..135462 attL    AAAAACTACAACAG 0.0 Click
2complement(144044..145210) PHAGE_Entero_mEp235: integrase; PP_00131; phage(gi428781836) 8e-18 Click
3complement(145228..145422) hypothetical; PP_00132 0.0 Click
4complement(145619..146134) PHAGE_Vibrio_vB_VpaS_MAR10: putative transcriptional regulator; PP_00133; phage(gi428782101) 2e-12 Click
5complement(146165..146416) hypothetical protein VV1_0068 [Vibrio vulnificus CMCP6] gi|27363554|ref|NP_759082.1|; PP_00134 7e-29 Click
6complement(146403..146663) PHAGE_Vibrio_kappa: hypothetical protein KP11; PP_00135; phage(gi165970245) 2e-07 Click
7complement(146963..149722) PHAGE_Burkho_KL3: gp3; PP_00136; phage(gi327198048) 0.0 Click
8complement(149977..150276) hypothetical protein VV1_0075 [Vibrio vulnificus CMCP6] gi|27363560|ref|NP_759088.1|; PP_00137 2e-37 Click
9complement(150269..150580) hypothetical protein VV1_0076 [Vibrio vulnificus CMCP6] gi|27363561|ref|NP_759089.1|; PP_00138 1e-22 Click
10complement(150595..150807) hypothetical protein VV1_0077 [Vibrio vulnificus CMCP6] gi|27363562|ref|NP_759090.1|; PP_00139 7e-18 Click
11complement(150795..151496) site-specific recombinase XerC [Vibrio vulnificus CMCP6] gi|27363563|ref|NP_759091.1|; PP_00140 4e-112 Click
12complement(151526..152005) PHAGE_Burkho_Bcep176: gp14; PP_00141; phage(gi77864639) 3e-11 Click
13complement(152190..152819) hypothetical; PP_00142 0.0 Click
14complement(152907..153032) hypothetical protein VV1_0080 [Vibrio vulnificus CMCP6] gi|27363565|ref|NP_759093.1|; PP_00143 6e-09 Click
15153237..154034 transcriptional regulator [Vibrio vulnificus CMCP6] gi|27363566|ref|NP_759094.1|; PP_00144 2e-65 Click
16154056..154397 hypothetical; PP_00145 0.0 Click
17complement(154578..155585) PHAGE_Vibrio_vB_VpaM_MAR: putative tail protein; PP_00146; phage(gi428782753) 7e-38 Click
18complement(155576..155782) PHAGE_Pseudo_phiCTX: hypothetical protein phiCTXp09; PP_00147; phage(gi17313226) 4e-07 Click
19complement(155785..156177) PHAGE_Vibrio_vB_VpaM_MAR: putative tail protein; PP_00148; phage(gi428782751) 8e-22 Click
20complement(156187..158280) PHAGE_Mannhe_phiMHaA1: tail protein T; PP_00149; phage(gi109289951) 4e-57 Click
21complement(158270..158437) hypothetical; PP_00150 0.0 Click
22complement(158703..159215) PHAGE_Pseudo_phiCTX: hypothetical protein phiCTXp25; PP_00151; phage(gi17313242) 3e-13 Click
23complement(159228..160394) PHAGE_Pseudo_phiCTX: hypothetical protein phiCTXp24; PP_00152; phage(gi17313241) 2e-54 Click
24complement(160482..161027) PHAGE_Vibrio_kappa: putative tail fiber assembly protein; PP_00153; phage(gi165970276) 9e-36 Click
25complement(161037..162212) PHAGE_Synech_S_CRM01: tail collar domain containing protein; PP_00154; phage(gi333798173) 2e-11 Click
26complement(162209..162799) PHAGE_Pseudo_phiCTX: hypothetical protein phiCTXp21; PP_00155; phage(gi17313238) 6e-18 Click
27complement(162859..163725) PHAGE_Burkho_phi52237: bacteriophage baseplate assembly protein J; PP_00156; phage(gi72537703) 2e-35 Click
28complement(163722..164069) PROPHAGE_Xylell_Temecula1: phage-related baseplate assembly protein; PP_00157; phage(gi28198990) 2e-07 Click
29complement(164070..164279) PHAGE_Yersin_phiR1_37: hypothetical protein; PP_00158; phage(gi358356625) 2e-16 Click
30complement(164366..164872) PHAGE_Vibrio_vB_VpaM_MAR: baseplate protein; PP_00159; phage(gi428782735) 1e-12 Click
31complement(164865..165212) hypothetical protein VV1_0101 [Vibrio vulnificus CMCP6] gi|27363585|ref|NP_759113.1|; PP_00160 2e-40 Click
32complement(165423..165917) hypothetical protein VV1_0102 [Vibrio vulnificus CMCP6] gi|27363586|ref|NP_759114.1|; PP_00161 2e-60 Click
33complement(165910..166473) hypothetical protein VV1_0103 [Vibrio vulnificus CMCP6] gi|27363587|ref|NP_759115.1|; PP_00162 5e-77 Click
34complement(166525..166821) chromosome segregation ATPase [Vibrio vulnificus CMCP6] gi|27363588|ref|NP_759116.1|; PP_00163 9e-39 Click
35complement(166811..167407) PHAGE_Bordet_1: Bbp1; PP_00164; phage(gi41179363) 1e-15 Click
36172698..172711 attR    AAAAACTACAACAG 0.0 Click

Region 2, total : 56 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1complement(547250..547993) PHAGE_Aeromo_phiO18P: putative cI repressor; PP_00525; phage(gi148727133) 2e-34 Click
2548168..548392 PHAGE_Entero_Mu: DNA binding protein ner; PP_00526; phage(gi9633495) 2e-18 Click
3548398..550404 PHAGE_Entero_Mu: transposase; PP_00527; phage(gi9633496) 2e-172 Click
4550431..551375 PHAGE_Entero_Mu: DNA transposition protein; PP_00528; phage(gi9633513) 3e-80 Click
5551383..551607 hypothetical protein VC395_1282 [Vibrio cholerae O395] gi|227117631|ref|YP_002819527.1|; PP_00529 2e-32 Click
6551617..552057 PHAGE_Bacill_IEBH: hypothetical protein IEBH_gp13; PP_00530; phage(gi197261523) 4e-05 Click
7552067..552441 hypothetical protein VC395_1280 [Vibrio cholerae O395] gi|227117629|ref|YP_002819525.1|; PP_00531 8e-59 Click
8552407..552604 hypothetical protein VC395_1279 [Vibrio cholerae O395] gi|227117628|ref|YP_002819524.1|; PP_00532 4e-05 Click
9552591..553205 PHAGE_Burkho_KS10: hypothetical protein KS10_gp21; PP_00533; phage(gi198449283) 9e-47 Click
10553215..553487 hypothetical protein VC395_1277 [Vibrio cholerae O395] gi|227117626|ref|YP_002819522.1|; PP_00534 3e-44 Click
11553480..553722 hypothetical protein VC395_1276 [Vibrio cholerae O395] gi|227117625|ref|YP_002819521.1|; PP_00535 1e-37 Click
12553706..553903 hypothetical protein VC395_1275 [Vibrio cholerae O395] gi|227117624|ref|YP_002819520.1|; PP_00536 4e-31 Click
13554056..554250 PHAGE_Yersin_PY54: hypothetical protein PY54p49; PP_00537; phage(gi33770558) 5e-08 Click
14554253..554522 PHAGE_Entero_phiEf11: asch domain protein; PP_00538; phage(gi282598726) 1e-14 Click
15554519..555049 PHAGE_Haemop_SuMu: hypothetical protein; PP_00539; phage(gi418489048) 1e-30 Click
16555129..555362 hypothetical protein VC395_1272 [Vibrio cholerae O395] gi|227117621|ref|YP_002819517.1|; PP_00540 2e-41 Click
17555372..555614 hypothetical; PP_00541 0.0 Click
18555626..556189 PHAGE_Entero_Mu: hypothetical protein Mup16; PP_00542; phage(gi9633506) 1e-26 Click
19556191..556445 hypothetical; PP_00543 0.0 Click
20556524..556940 PHAGE_Entero_Mu: Mor; PP_00544; phage(gi9633507) 2e-18 Click
21557025..557582 PHAGE_Pelagi_HTVC008M: hypothetical protein; PP_00545; phage(gi460042628) 3e-17 Click
22557582..558448 hypothetical protein VC395_1266 [Vibrio cholerae O395] gi|227117615|ref|YP_002819511.1|; PP_00546 1e-89 Click
23558445..558675 PHAGE_Halomo_1: hypothetical protein HAPgp41; PP_00547; phage(gi167832386) 2e-05 Click
24558675..558974 hypothetical protein VC395_1264 [Vibrio cholerae O395] gi|227117613|ref|YP_002819509.1|; PP_00548 8e-48 Click
25558983..559273 PHAGE_Entero_Mu: hypothetical protein Mup26; PP_00549; phage(gi9633517) 2e-23 Click
26559285..559866 PHAGE_Entero_Mu: hypothetical protein Mup27; PP_00550; phage(gi9633518) 6e-34 Click
27559867..560061 PHAGE_Aeromo_phiAS5: hypothetical protein; PP_00551; phage(gi310722747) 2e-16 Click
28560065..561630 PHAGE_Entero_Mu: putative portal protein; PP_00552; phage(gi9633519) 3e-128 Click
29561627..563186 PHAGE_Haemop_SuMu: portal protein gp29; PP_00553; phage(gi418489080) 2e-57 Click
30563179..563952 PHAGE_Entero_Mu: virion morphogenesis late F orf; PP_00554; phage(gi9633521) 2e-35 Click
31563964..564212 hypothetical protein VC395_1258 [Vibrio cholerae O395] gi|227117607|ref|YP_002819503.1|; PP_00555 4e-37 Click
32564209..564721 PHAGE_Entero_RB43: hypothetical protein RB43ORF128w; PP_00556; phage(gi66391579) 1e-30 Click
33564718..565353 hypothetical protein VC395_1256 [Vibrio cholerae O395] gi|227117605|ref|YP_002819501.1|; PP_00557 1e-111 Click
34565353..565637 hypothetical protein VC395_1255 [Vibrio cholerae O395] gi|227117604|ref|YP_002819500.1|; PP_00558 4e-45 Click
35566003..566923 PHAGE_Pseudo_JBD30: hypothetical protein; PP_00559; phage(gi448244621) 5e-22 Click
36566938..567837 PHAGE_Rhodov_RS1: major head protein; PP_00560; phage(gi472342916) 2e-51 Click
37567903..568424 hypothetical protein VC395_1251 [Vibrio cholerae O395] gi|227117600|ref|YP_002819496.1|; PP_00561 2e-49 Click
38568435..568869 PHAGE_Entero_Mu: hypothetical protein Mup36; PP_00562; phage(gi9633527) 4e-07 Click
39568869..569411 PHAGE_Entero_Mu: putative virion morphogenesis protein; PP_00563; phage(gi9633522) 9e-07 Click
40569408..570007 hypothetical protein VC395_1248 [Vibrio cholerae O395] gi|227117597|ref|YP_002819493.1|; PP_00564 9e-106 Click
41570021..570275 hypothetical protein VC395_1247 [Vibrio cholerae O395] gi|227117596|ref|YP_002819492.1|; PP_00565 2e-24 Click
42570278..571762 PHAGE_Entero_Mu: major tail subunit; PP_00566; phage(gi9633530) 5e-94 Click
43571777..572130 hypothetical protein VC395_1245 [Vibrio cholerae O395] gi|227117594|ref|YP_002819490.1|; PP_00567 1e-58 Click
44572130..572474 PHAGE_Entero_Mu: hypothetical protein Mup41; PP_00568; phage(gi9633532) 2e-13 Click
45572479..572616 hypothetical; PP_00569 0.0 Click
46572600..574360 PHAGE_Salmon_ST64B: tail protein; PP_00570; phage(gi23505460) 2e-05 Click
47574372..575691 PHAGE_Entero_Mu: putative DNA circulation protein; PP_00571; phage(gi9633534) 4e-20 Click
48575684..576760 PHAGE_Entero_Mu: putative tail protein; PP_00572; phage(gi9633535) 1e-48 Click
49576754..577371 PHAGE_Entero_Mu: putative baseplate assembly protein; PP_00573; phage(gi9633536) 4e-21 Click
50577374..577823 PHAGE_Entero_Mu: hypothetical protein Mup46; PP_00574; phage(gi9633537) 3e-19 Click
51577813..578880 PHAGE_Entero_Mu: hypothetical protein Mup47; PP_00575; phage(gi9633538) 8e-46 Click
52578865..579452 PHAGE_Entero_Mu: hypothetical protein Mup48; PP_00576; phage(gi9633539) 1e-15 Click
53579452..580303 PHAGE_Vibrio_vB_VchM_138: putative tail-fiber protein; PP_00577; phage(gi422936602) 5e-66 Click
54580303..580839 PHAGE_Vibrio_vB_VchM_138: putative tail-fiber protein; PP_00578; phage(gi422936603) 4e-32 Click
55complement(580903..581664) chemotaxis protein methyltransferase CheR [Vibrio cholerae O395] gi|147671444|ref|YP_001214993.1|; PP_00579 6e-142 Click
56complement(581679..583715) PHAGE_Staphy_SMSAP5: phage tail tape measure protein; PP_00580; phage(gi422935797) 3e-06 Click

Region 3, total : 9 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
12447689..2449446 PHAGE_Pseudo_B3: putative transposase A subunit; PP_02258; phage(gi56692580) 2e-93 Click
22449418..2450527 PHAGE_Pseudo_B3: putative transposase B subunit; PP_02259; phage(gi56692579) 2e-45 Click
32450530..2450991 hypothetical protein VC395_1912 [Vibrio cholerae O395] gi|227118248|ref|YP_002820144.1|; PP_02260 6e-83 Click
42451805..2452173 PHAGE_Entero_Mu: Mor; PP_02261; phage(gi9633507) 2e-06 Click
52452160..2452480 PHAGE_Escher_D108: GemB; PP_02262; phage(gi281199660) 4e-05 Click
62452499..2453077 hypothetical protein VC395_1908 [Vibrio cholerae O395] gi|227118244|ref|YP_002820140.1|; PP_02263 1e-98 Click
72453138..2453509 hypothetical protein VC395_1907 [Vibrio cholerae O395] gi|227118243|ref|YP_002820139.1|; PP_02264 5e-63 Click
82453558..2453917 PHAGE_Entero_Mu: hypothetical protein Mup41; PP_02265; phage(gi9633532) 2e-09 Click
92454052..2455743 PHAGE_Entero_Mu: putative tape measure protein; PP_02266; phage(gi9633533) 3e-33 Click