Pseudomonas sp. S9 , whole genome shotgun sequence. [asmbl_id: NC_000000].4796529, GC%: 56.52%



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            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 52 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1complement(2316042..2316569) PHAGE_Pseudo_F116: transcriptional regulator; PP_02280; phage(gi56692918) 5e-42 Click
2complement(2317025..2317252) hypothetical; PP_02281 0.0 Click
32317383..2317916 hypothetical protein PFLU2851 [Pseudomonas fluorescens SBW25] gi|229590311|ref|YP_002872430.1|; PP_02282 2e-23 Click
42317982..2318230 PHAGE_Sulfit_pCB2047_A: hypothetical protein; PP_02283; phage(gi472341908) 2e-05 Click
52318230..2318979 PHAGE_Xantho_CP2: hypothetical protein; PP_02284; phage(gi448245213) 1e-38 Click
62318976..2319698 PHAGE_Cronob_phiES15: putative replication protein P; PP_02285; phage(gi401817577) 2e-10 Click
72319695..2319928 hypothetical; PP_02286 0.0 Click
82319921..2320052 hypothetical; PP_02287 0.0 Click
92320052..2320255 PHAGE_Pseudo_vB_PaeS_PMG1: DksA-like zinc finger domain containing protein; PP_02288; phage(gi374531723) 9e-13 Click
102320248..2320574 hypothetical protein PflA506_2043 [Pseudomonas fluorescens A506] gi|387893233|ref|YP_006323530.1|; PP_02289 2e-05 Click
112320678..2321025 PHAGE_Cronob_phiES15: hypothetical protein; PP_02290; phage(gi401817579) 5e-15 Click
122321022..2321216 hypothetical; PP_02291 0.0 Click
132321632..2322117 PHAGE_Pseudo_vB_PaeS_PMG1: NinG protein; PP_02292; phage(gi374531728) 2e-62 Click
142322129..2322317 hypothetical; PP_02293 0.0 Click
152322302..2322520 hypothetical; PP_02294 0.0 Click
162322517..2322717 hypothetical; PP_02295 0.0 Click
172323155..2323271 hypothetical; PP_02296 0.0 Click
182323310..2323942 PHAGE_Pseudo_phi297: hypothetical protein; PP_02297; phage(gi374531281) 7e-34 Click
192324346..2324507 hypothetical; PP_02298 0.0 Click
202324705..2324962 PHAGE_Burkho_phiE125: putative class II holin; PP_02299; phage(gi17975185) 2e-08 Click
212324959..2325468 PHAGE_Burkho_BcepMigl: SAR endolysin; PP_02300; phage(gi431809930) 2e-60 Click
222325450..2325641 hypothetical; PP_02301 0.0 Click
232325638..2325814 hypothetical; PP_02302 0.0 Click
242325829..2326110 PHAGE_Entero_cdtI: lysin; PP_02303; phage(gi148609441) 2e-06 Click
252326126..2326311 hypothetical; PP_02304 0.0 Click
262326316..2326486 hypothetical; PP_02305 0.0 Click
272326483..2326692 hypothetical protein PPS_2471 [Pseudomonas putida S16] gi|339487382|ref|YP_004701910.1|; PP_02306 2e-06 Click
28complement(2327107..2327301) hypothetical; PP_02307 0.0 Click
292327382..2327981 PHAGE_Escher_HK639: terminase small subunit; PP_02308; phage(gi356870601) 4e-25 Click
302327982..2329463 PHAGE_Cronob_phiES15: terminase large subunit; PP_02309; phage(gi401817592) 0.0 Click
312329468..2330847 PHAGE_Escher_HK639: hypothetical protein; PP_02310; phage(gi356870603) 3e-97 Click
322330847..2331959 PHAGE_Cronob_phiES15: hypothetical protein; PP_02311; phage(gi401817594) 1e-94 Click
332331969..2332199 hypothetical protein BP3381 [Bordetella pertussis Tohama I] gi|33594266|ref|NP_881910.1|; PP_02312 8e-14 Click
342332252..2332413 hypothetical; PP_02313 0.0 Click
352332565..2333317 PHAGE_Acinet_Bphi_B1251: hypothetical protein; PP_02314; phage(gi423262006) 5e-70 Click
362333379..2334527 PHAGE_Vibrio_vB_VpaS_MAR10: major capsid protein; PP_02315; phage(gi428782119) 2e-25 Click
372334585..2334896 PHAGE_Tetras_TJE1: hypothetical protein; PP_02316; phage(gi431810886) 9e-05 Click
382334900..2335394 PHAGE_Pseudo_vB_Pae_Kakheti25: virion protein; PP_02317; phage(gi388542673) 2e-19 Click
392335394..2335783 hypothetical protein PSPA7_2411 [Pseudomonas aeruginosa PA7] gi|152989130|ref|YP_001347778.1|; PP_02318 3e-22 Click
402335780..2336358 PHAGE_Shigel_EP23: putative tail protein; PP_02319; phage(gi371496282) 4e-26 Click
412336355..2336771 PHAGE_Cronob_phiES15: hypothetical protein; PP_02320; phage(gi401817601) 4e-10 Click
422336874..2337077 hypothetical; PP_02321 0.0 Click
432337176..2337823 PHAGE_Cronob_phiES15: putative major tail protein; PP_02322; phage(gi401817602) 8e-30 Click
442337877..2338188 PHAGE_Cronob_phiES15: hypothetical protein; PP_02323; phage(gi401817603) 4e-11 Click
452338356..2338502 hypothetical; PP_02324 0.0 Click
462338506..2341751 PHAGE_Pseudo_MP29: putative tail component protein; PP_02325; phage(gi215480016) 3e-136 Click
472341751..2342614 PHAGE_Pelagi_HTVC010P: putative tail tubular protein B; PP_02326; phage(gi460042270) 1e-07 Click
482342721..2343569 PHAGE_Caulob_CcrRogue: putative tail protein; PP_02327; phage(gi414088957) 6e-10 Click
492343566..2343991 PHAGE_phiJL001: cell wall-associated hydrolase; PP_02328; phage(gi62327194) 1e-10 Click
502343988..2347212 PHAGE_phiJL001: gp86; PP_02329; phage(gi62327193) 1e-65 Click
512347209..2348489 PHAGE_Roseob_1: ribonuclease III; PP_02330; phage(gi331028139) 2e-18 Click
52complement(2348475..2349638) PHAGE_Burkho_BcepMu: gp53; PP_02331; phage(gi48696963) 4e-09 Click

Region 2, total : 21 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
14682548..4682559 attL    TGCTGGCTCTGC 0.0 Click
24682679..4683791 PHAGE_Burkho_DC1: integrase; PP_04633; phage(gi401723020) 1e-104 Click
3complement(4683788..4684069) PHAGE_Burkho_AH2: excisionase; PP_04634; phage(gi399529070) 1e-20 Click
4complement(4684304..4684426) hypothetical; PP_04635 0.0 Click
5complement(4684475..4684699) hypothetical protein PFL_1980 [Pseudomonas protegens Pf-5] gi|70729362|ref|YP_259099.1|; PP_04636 7e-07 Click
6complement(4684696..4685388) hypothetical protein Pmen_3990 [Pseudomonas mendocina ymp] gi|146309004|ref|YP_001189469.1|; PP_04637 1e-44 Click
7complement(4685435..4685737) PHAGE_Burkho_AH2: excisionase; PP_04638; phage(gi399529070) 5e-08 Click
8complement(4685734..4686213) hypothetical protein Pmen_3987 [Pseudomonas mendocina ymp] gi|146309001|ref|YP_001189466.1|; PP_04639 3e-49 Click
9complement(4686194..4686379) hypothetical; PP_04640 0.0 Click
10complement(4686369..4686659) hypothetical protein Pmen_3986 [Pseudomonas mendocina ymp] gi|146309000|ref|YP_001189465.1|; PP_04641 2e-40 Click
11complement(4686669..4687229) hypothetical; PP_04642 0.0 Click
12complement(4687511..4688224) PHAGE_Bordet_1: repressor protein cI; PP_04643; phage(gi41179362) 1e-25 Click
134688330..4688581 phage regulatory protein [Vibrio cholerae O1 str. 2010EL-1786] gi|360034565|ref|YP_004936328.1|; PP_04644 5e-08 Click
144688914..4689426 PHAGE_Burkho_phiE125: hypothetical protein phiE125p56; PP_04645; phage(gi17975217) 2e-05 Click
154689419..4689640 PHAGE_Pseudo_vB_PaeS_PMG1: DksA-like zinc finger domain containing protein; PP_04646; phage(gi374531723) 1e-05 Click
164689637..4690341 PHAGE_Stenot_S1: putative primase; PP_04647; phage(gi213163899) 3e-33 Click
174690326..4691882 PHAGE_Staphy_2638A: ORF003; PP_04648; phage(gi66395453) 3e-61 Click
184691879..4692235 hypothetical protein Pmen_3977 [Pseudomonas mendocina ymp] gi|146308991|ref|YP_001189456.1|; PP_04649 7e-36 Click
194692567..4692704 hypothetical; PP_04650 0.0 Click
204692713..4693060 pyocin R2, holin family protein [Pseudomonas protegens Pf-5] gi|70729372|ref|YP_259110.1|; PP_04651 9e-31 Click
214693565..4694290 PHAGE_Pseudo_F10: hypothetical protein PPF10_gp063; PP_04652; phage(gi148912828) 1e-49 Click
224694457..4695032 PHAGE_Stenot_S1: putative terminase small subunit; PP_04653; phage(gi213163901) 1e-05 Click
234695516..4695527 attR    TGCTGGCTCTGC 0.0 Click