Vibrio parahaemolyticus 10329 VP10329_1, whole genome shotgun [asmbl_id: NC_000000].5093003, GC%: 45.27%



Text file for download

            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 16 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1890165..890177 attL    TTTTATTATTGTT 0.0 Click
2891220..891585 PHAGE_Vibrio_VfO3K6: Vpf121; VP10329_13385; phage(gi9635475) 2e-64 Click
3complement(891615..892325) hypothetical protein; VP10329_13390 0.0 Click
4complement(892464..892742) hypothetical protein; VP10329_13395 0.0 Click
5complement(892894..893166) hypothetical protein; VP10329_13400 0.0 Click
6complement(893682..893825) hypothetical protein; VP10329_13405 0.0 Click
7complement(893825..895210) PHAGE_Vibrio_VfO3K6: Vpf461; VP10329_13410; phage(gi9635473) 0.0 Click
8complement(895215..895559) PHAGE_Vibrio_VfO3K6: Vpf114; VP10329_13415; phage(gi9635472) 7e-61 Click
9complement(895561..896667) PHAGE_Vibrio_VfO3K6: Vpf504; VP10329_13420; phage(gi9635471) 0.0 Click
10complement(897193..897438) PHAGE_Vibrio_VfO3K6: Vpf81; VP10329_13425; phage(gi9635470) 2e-36 Click
11complement(897444..897674) PHAGE_Vibrio_VfO3K6: Vpf76; VP10329_13430; phage(gi9635469) 1e-38 Click
12complement(897678..898037) PHAGE_Vibrio_VfO3K6: Vpf119; VP10329_13435; phage(gi9635468) 4e-64 Click
13complement(898041..899189) PHAGE_Vibrio_VfO3K6: Vpf402; VP10329_13440; phage(gi9635477) 0.0 Click
14complement(899173..899388) hypothetical protein; VP10329_13445 0.0 Click
15complement(899392..900156) PHAGE_Vibrio_VP882: putative exonuclease; VP10329_13450; phage(gi126010887) 2e-36 Click
16900149..900517 PHAGE_Vibrio_VfO3K6: Vpf148; VP10329_13455; phage(gi9635476) 7e-37 Click
17complement(900685..902415) PHAGE_Ectoca_1: EsV-1-65; VP10329_13460; phage(gi13242537) 3e-43 Click
18903591..903603 attR    TTTTATTATTGTT 0.0 Click

Region 2, total : 38 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
11126853..1126866 attL    TCGAAATAACTGCG 0.0 Click
2complement(1133983..1135011) PHAGE_Bdello_phi1402: hypothetical protein; VP10329_19395; phage(gi338826936) 1e-10 Click
3complement(1135004..1135414) hypothetical protein; VP10329_19400 0.0 Click
4complement(1135407..1135943) PHAGE_Bdello_phi1402: hypothetical protein; VP10329_19405; phage(gi338826934) 5e-11 Click
5complement(1135943..1136239) hypothetical protein; VP10329_19410 0.0 Click
6complement(1136291..1137217) hypothetical protein; VP10329_19415 0.0 Click
7complement(1137329..1137991) PHAGE_Burkho_BcepNazgul: tail fiber protein; VP10329_19420; phage(gi34610150) 9e-05 Click
8complement(1138053..1138955) PHAGE_Bdello_phi1402: hypothetical protein; VP10329_19425; phage(gi338826929) 2e-05 Click
9complement(1138952..1139446) hypothetical protein; VP10329_19430 0.0 Click
10complement(1139459..1140526) PHAGE_Bdello_phi1402: hypothetical protein; VP10329_19435; phage(gi338826927) 5e-11 Click
11complement(1140526..1141821) PHAGE_Entero_Sf6: gene 2 protein; VP10329_19440; phage(gi41057280) 9e-18 Click
12complement(1141943..1142431) PHAGE_phiJL001: gp58; VP10329_19445; phage(gi62327244) 3e-09 Click
13complement(1143058..1143792) PHAGE_Pseudo_1: virion structural protein; VP10329_19450; phage(gi189490384) 3e-08 Click
14complement(1144053..1144388) hypothetical protein; VP10329_19455 0.0 Click
151144687..1145382 large protein; VP10329_19460 0.0 Click
161145382..1145951 hypothetical protein; VP10329_19465 0.0 Click
171145984..1146361 hypothetical protein; VP10329_19470 0.0 Click
181146687..1146896 hypothetical protein; VP10329_19475 0.0 Click
19complement(1146910..1147125) hypothetical protein; VP10329_19480 0.0 Click
20complement(1147122..1147286) hypothetical protein; VP10329_19485 0.0 Click
21complement(1147679..1149904) PHAGE_Lactoc_Q54: putative ribonuclease; VP10329_19490; phage(gi115304286) 2e-62 Click
22complement(1150199..1150411) PHAGE_Lactoc_bIL312: Csp; VP10329_19495; phage(gi13095918) 4e-16 Click
231151316..1151519 hypothetical protein; VP10329_19500 0.0 Click
24complement(1151742..1152149) PHAGE_Bacter_2: Q protein; Q; phage protein; VP10329_19505(gi212499710) 3e-13 Click
25complement(1152186..1152587) PHAGE_Aggreg_S1249: NinG recombination protein; VP10329_19510; phage(gi273809581) 5e-24 Click
26complement(1152577..1152759) hypothetical protein; VP10329_19515 0.0 Click
27complement(1152756..1153406) PHAGE_Entero_mEp237: hypothetical protein; VP10329_19520; phage(gi435439315) 4e-22 Click
28complement(1153399..1153779) PHAGE_Vibrio_VBM1: hypothetical protein; VP10329_19525; phage(gi472340804) 9e-08 Click
29complement(1153776..1154729) PHAGE_Entero_phiV10: putative primosomal protein; VP10329_19530; phage(gi89152459) 1e-21 Click
30complement(1154795..1155013) hypothetical protein; VP10329_19535 0.0 Click
31complement(1155010..1155474) PHAGE_Entero_mEp390: hypothetical protein; VP10329_19540; phage(gi428782704) 5e-21 Click
32complement(1155494..1155745) PHAGE_Escher_HK75: regulatory protein cro; VP10329_19545; phage(gi356870715) 6e-10 Click
331155828..1156514 PHAGE_Entero_mEp235: prophage repressor; VP10329_19550; phage(gi428781850) 5e-30 Click
341157494..1158480 hypothetical protein; VP10329_19555 0.0 Click
351158467..1159765 hypothetical protein; VP10329_19560 0.0 Click
361159704..1160699 PHAGE_Vibrio_VvAW1: hypothetical protein; VP10329_19565; phage(gi460042917) 2e-26 Click
371160692..1161219 PHAGE_Pectob_ZF40: hypothetical protein; VP10329_19570; phage(gi422936646) 1e-10 Click
381161544..1161732 PHAGE_Bdello_phi1402: hypothetical protein; VP10329_19575; phage(gi338826920) 3e-11 Click
391161971..1163176 PHAGE_Entero_mEp235: integrase; VP10329_19580; phage(gi428781836) 6e-11 Click
401164573..1164586 attR    TCGAAATAACTGCG 0.0 Click