Yersinia pestis KIM10+, complete genome. [asmbl_id: NC_000000].4600755, GC%: 47.64%



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            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 9 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
11356501..1356513 attL    GAAAATCAGATAA 0.0 Click
2complement(1362250..1363017) PHAGE_Mycoba_HINdeR_NC_021308: esterase/lipase; y1212; phage(gi508179963) 1e-06 Click
3complement(1364142..1364327) PROPHAGE_Escher_CFT073: prophage P4 integrase; y1213; phage(gi26251024) 1e-16 Click
4complement(1364410..1364673) PROPHAGE_Salmon_LT2: transposase; y1214; phage(gi16766077) 5e-30 Click
5complement(1364722..1365204) PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; y1215; phage(gi16130540) 3e-33 Click
6complement(1365220..1366002) PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposition protein; y1216; phage(gi557307613) 2e-57 Click
7complement(1365999..1367021) PHAGE_Entero_fiAA91_ss_NC_022750: IS21 transposase; y1217; phage(gi557307612) 1e-34 Click
81367078..1367845 conserved hypothetical protein; y1218 0.0 Click
9complement(1368075..1369079) solute-binding periplasmic protein of high-affinity glycine betaine/proline ABC transporterhigh-affinity ABC transport system for glycine betaine and proline; y1219 0.0 Click
10complement(1369127..1370293) PHAGE_Lactob_phi_jlb1_NC_024206: putative minor tail protein; y1220; phage(gi971848929) 5e-06 Click
111377796..1377808 attR    GAAAATCAGATAA 0.0 Click

Region 2, total : 45 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
12413020..2414219 PHAGE_Faustovirus_NC_024302: cysteine desulfurase; y2182; phage(gi655871957) 9e-41 Click
22414223..2415395 hypothetical; y2183 0.0 Click
32415700..2416908 PROPHAGE_Escher_CFT073: transposase; y2184; phage(gi26246249) 0.0 Click
4complement(2417129..2417548) PHAGE_Bacter_APSE_2_NC_011551: tail fiber; y2185; phage(gi212499733) 3e-10 Click
5complement(2417559..2418476) PHAGE_Edward_eiAU_183_NC_023555: putative tail protein; y2186; phage(gi589889269) 6e-14 Click
6complement(2418493..2419506) PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; y2187; phage(gi401817612) 1e-24 Click
72418846..2418857 attL    TTGGCGGCTCAG 0.0 Click
8complement(2419491..2422694) PHAGE_Cronob_phiES15_NC_018454: putative host specificity protein; y2188; phage(gi401817611) 0.0 Click
9complement(2423266..2423886) PHAGE_Entero_mEpX2_NC_019705: tail assembly protein; y2189; phage(gi428765633) 1e-65 Click
10complement(2424300..2424851) PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; y2190; phage(gi401817606) 8e-08 Click
11complement(2424950..2426044) PHAGE_Edward_FW_3_NC_026611: putative antirepressor protein Ant; y2191; phage(gi764162270) 2e-38 Click
122426322..2426753 PHAGE_Escher_TL_2011b_NC_019445: hypothetical protein; y2192; phage(gi418487671) 3e-32 Click
13complement(2426832..2427464) hypothetical; y2193 0.0 Click
14complement(2427725..2428435) PHAGE_Entero_HK140_NC_019710: minor tail protein K; y2194; phage(gi428781957) 1e-108 Click
15complement(2428438..2429190) PHAGE_Entero_HK225_NC_019717: minor tail protein; y2195; phage(gi428782393) 5e-101 Click
16complement(2429364..2429705) PHAGE_Cronob_phiES15_NC_018454: putative minor tail protein; y2196; phage(gi401817607) 3e-31 Click
17complement(2429708..2433211) PHAGE_Entero_c_1_NC_019706: tail length tape measure protein; y2197; phage(gi428781748) 8e-152 Click
18complement(2433520..2433831) PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; y2198; phage(gi401817603) 2e-31 Click
19complement(2433844..2434764) PHAGE_Cronob_phiES15_NC_018454: putative major tail protein; y2199; phage(gi401817602) 5e-75 Click
20complement(2434830..2435237) PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; y2200; phage(gi401817601) 2e-16 Click
21complement(2435234..2435818) PHAGE_Entero_EK99P_1_NC_024783: putative tail protein; y2201; phage(gi682122969) 8e-28 Click
22complement(2435820..2436170) PHAGE_Cronob_phiES15_NC_018454: putative structural protein 2; y2202; phage(gi401817599) 9e-33 Click
23complement(2436172..2436426) PHAGE_Salmon_SSU5_JQ965645: hypothetical protein; y2203; phage(gi390013963) 1e-19 Click
24complement(2436423..2436980) PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; y2204; phage(gi401817598) 5e-23 Click
25complement(2436953..2438158) PHAGE_Acinet_Bphi_B1251_NC_019541: major capsid protein; y2205; phage(gi423262007) 2e-113 Click
26complement(2438172..2438945) PHAGE_Xantho_Xp15_NC_007024: putative phage structural protein; y2206; phage(gi66392059) 2e-19 Click
27complement(2439067..2440179) PHAGE_Cronob_phiES15_NC_018454: hypothetical protein; y2207; phage(gi401817594) 5e-123 Click
28complement(2440180..2440821) PHAGE_Paraco_vB_PmaS_IMEP1_NC_026608: portal protein; y2208; phage(gi764162030) 3e-35 Click
29complement(2440840..2441568) PHAGE_Burkho_KL1_NC_018278: portal protein; y2209; phage(gi399528722) 3e-35 Click
30complement(2442547..2443755) PROPHAGE_Escher_CFT073: transposase; y2210; phage(gi26246249) 0.0 Click
31complement(2444391..2444840) PHAGE_Salmon_vB_SosS_Oslo_NC_018279: hypothetical protein; y2212; phage(gi399528759) 7e-51 Click
32complement(2444871..2445506) PHAGE_Pectob_ZF40_NC_019522: putative transposase; y2213; phage(gi422936679) 5e-87 Click
33complement(2445963..2446760) PHAGE_Cronob_ENT47670_NC_019927: phage antirepressor protein; y2214; phage(gi431810509) 1e-49 Click
34complement(2447222..2447680) PHAGE_Entero_cdtI_NC_009514: lysin; y2215; phage(gi148609441) 3e-24 Click
35complement(2447665..2447820) PHAGE_Cronob_phiES15_NC_018454: putative endolysin; y2216; phage(gi401817587) 3e-11 Click
36complement(2448923..2449132) hypothetical; y2217 0.0 Click
37complement(2449556..2450119) PHAGE_Salmon_SPN3UB_NC_019545: hypothetical protein; y2218; phage(gi423262398) 2e-29 Click
38complement(2450268..2450393) hypothetical; y2219 0.0 Click
39complement(2450390..2450779) PHAGE_Entero_YYZ_2008_NC_011356: antitermination protein Q; y2220; phage(gi209427762) 4e-44 Click
402450765..2451013 hypothetical; y2221 0.0 Click
41complement(2450780..2451385) PHAGE_Edward_FW_3_NC_026611: putative recombination endonuclease; y2222; phage(gi764162320) 7e-60 Click
42complement(2451459..2451905) PHAGE_Cronob_ENT47670_NC_019927: putative ninB protein; y2223; phage(gi431810524) 7e-47 Click
432451986..2452630 PHAGE_Pseudo_F116_NC_006552: DNA adenine methyltransferase; y2224; phage(gi56692911) 6e-43 Click
44complement(2453358..2454140) PROPHAGE_Escher_CFT073: transposase/IS protein; y2225; phage(gi26248359) 6e-143 Click
45complement(2454137..2455159) PROPHAGE_Escher_CFT073: transposase; y2226; phage(gi26248360) 0.0 Click
462455024..2455035 attR    TTGGCGGCTCAG 0.0 Click
472455229..2456467 PHAGE_Salmon_Fels_1_NC_010391: putative bacteriophage integrase; y2227; phage(gi169257156) 2e-125 Click

Region 3, total : 16 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1complement(2691227..2691565) PROPHAGE_Escher_CFT073: transposase; y2424; phage(gi26246249) 4e-56 Click
2complement(2691565..2692341) PROPHAGE_Escher_CFT073: transposase; y2425; phage(gi26246249) 5e-139 Click
3complement(2692473..2693549) hypothetical; y2426 0.0 Click
4complement(2693615..2693905) PHAGE_Burkho_phiE202_NC_009234: gp7, pANL12; y2427; phage(gi134288781) 5e-07 Click
5complement(2693886..2694158) PHAGE_Burkho_phiE202_NC_009234: gp6, pANL56; y2428; phage(gi134288760) 4e-12 Click
62694189..2694548 PHAGE_Salmon_SP_004_NC_021774: phage baseplate assembly protein; y2429; phage(gi526003627) 2e-18 Click
7complement(2694215..2694610) PHAGE_Erwini_ENT90_NC_019932: hypothetical protein; y2430; phage(gi431810949) 1e-14 Click
82694569..2694844 PHAGE_Salmon_SP_004_NC_021774: baseplate wedge subunit; y2431; phage(gi526003628) 5e-23 Click
92694861..2695148 PHAGE_Aeromo_vB_AsaM_56_NC_019527: putative tail-fiber protein; y2432; phage(gi422937565) 1e-05 Click
102695795..2696100 hypothetical; y2433 0.0 Click
112696524..2696664 PHAGE_Salmon_SP_004_NC_021774: major tail sheath protein; y2434; phage(gi526003633) 2e-13 Click
122696748..2697194 putative transposase; y2435 0.0 Click
132697266..2698225 PHAGE_Lactob_phiAT3_NC_005893: putative transposase B; y2436; phage(gi48697274) 1e-14 Click
142698815..2699012 hypothetical; y2437 0.0 Click
15complement(2700135..2700260) hypothetical; y2438 0.0 Click
16complement(2700349..2700576) PHAGE_Salmon_SPN9CC_NC_017985: replicative DNA helicase; y2439; phage(gi389060513) 3e-14 Click