Actinobacillus pleuropneumoniae serovar 6 str. Femo , whole [asmbl_id: NC_000000].2375501, GC%: 40.95%



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            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 29 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
12101613..2101628 attL    GTAAAAGAAATTTTAG 0.0 Click
2complement(2114416..2115171) PHAGE_Microm_12T: hypothetical protein; APP6_0634; phage(gi472342811) 7e-05 Click
32116073..2117260 PHAGE_Salmon_ST64B: Major capsid protein precursor; APP6_0635; phage(gi23505451) 5e-57 Click
42117335..2117907 PHAGE_Entero_EFRM31: prohead protease; APP6_0636; phage(gi327198114) 8e-28 Click
52117909..2119141 PHAGE_Entero_phiP27: putative portal protein; APP6_0637; phage(gi18249902) 6e-53 Click
62119125..2119472 PHAGE_Geobac_E2: putative head-tail adaptor; APP6_0638; phage(gi148747735) 4e-11 Click
72119462..2119770 PHAGE_Entero_mEp235: head-tail connector II; APP6_0639; phage(gi428781817) 2e-09 Click
82119780..2120136 PHAGE_Bacill_phi105: hypothetical protein phi105_50; APP6_0640; phage(gi22855043) 4e-22 Click
92120310..2120669 PHAGE_Salmon_ST64B: terminase small subunit; APP6_0641; phage(gi23505446) 2e-13 Click
102120666..2122336 PHAGE_Geobac_E2: putative terminase large subunit; APP6_0642; phage(gi148747729) 7e-90 Click
112123009..2123881 hypothetical protein; APP6_0643 0.0 Click
122124015..2124212 hypothetical protein; APP6_0644 0.0 Click
132124224..2124586 hypothetical protein; APP6_0645 0.0 Click
142124732..2124896 hypothetical protein; APP6_0646 0.0 Click
152125071..2125847 hypothetical protein; APP6_0647 0.0 Click
162125840..2126214 hypothetical protein; APP6_0648 0.0 Click
172126207..2126632 hypothetical protein; APP6_0649 0.0 Click
182126619..2128421 PHAGE_Entero_P4: DNA primase; APP6_0650; phage(gi9627512) 3e-79 Click
19complement(2128592..2129812) PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; APP6_0651; phage(gi16130540) 4e-86 Click
20complement(2130014..2130090) tRNA 0.0 Click
21complement(2130154..2130966) PHAGE_Entero_P1: Ppp; APP6_0653; phage(gi46401710) 6e-10 Click
22complement(2130991..2131677) putative effector of murein hydrolase; APP6_0654 0.0 Click
23complement(2131674..2132045) putative effector of murein hydrolase LrgA; APP6_0655 0.0 Click
24complement(2132120..2134096) PHAGE_Lactoc_Q54: putative ribonuclease; APP6_0656; phage(gi115304286) 2e-30 Click
25complement(2134228..2134506) PHAGE_Burkho_phiE202: gp7, pANL12; APP6_0657; phage(gi134288781) 9e-08 Click
26complement(2134954..2135742) PHAGE_Tricho_2c: hypothetical protein TNAV2c_gp071; APP6_0658; phage(gi116326757) 4e-05 Click
27complement(2135945..2136670) PHAGE_Synech_S_CRM01: methyltransferase domain-containing protein; APP6_0659; phage(gi333798309) 9e-23 Click
28complement(2136678..2137463) PHAGE_Emilia_86: putative esterase; APP6_0660; phage(gi73852837) 2e-06 Click
292137587..2138147 replication initiation regulator SeqA; APP6_0661 0.0 Click
302138165..2139595 O-succinylbenzoic acid--CoA ligase; APP6_0662 0.0 Click
312139576..2142920 PHAGE_Melano_entomopoxvirus: ORF MSV156 hypothetical protein; APP6_0663; phage(gi9631364) 1e-08 Click
322156221..2156236 attR    GTAAAAGAAATTTTAG 0.0 Click

Region 2, total : 22 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1complement(2291084..2296528) PHAGE_Gifsy_1: bacteriophage host specificity protein; tail fiber; Lambda gpJ homolog; APP6_0806; phage(gi169257216) 2e-180 Click
2complement(2296577..2297212) PHAGE_Salmon_1: putative bacteriophage tail assembly protein I; Lambda gpI homolog; APP6_0807; phage(gi169257201) 5e-38 Click
3complement(2297155..2297901) PHAGE_Entero_4795: putative tail fiber component; APP6_0808; phage(gi157166055) 2e-70 Click
4complement(2297905..2298615) PHAGE_Entero_HK630: minor tail protein L; APP6_0809; phage(gi428782805) 4e-61 Click
5complement(2298612..2298941) PHAGE_Gifsy_1: bacteriophage tail tip assembly protein; Lambda gpM homolog; APP6_0810; phage(gi169257220) 1e-12 Click
6complement(2298945..2301572) PHAGE_Salmon_E1: putative tail protein (tape measure); APP6_0811; phage(gi170676309) 1e-81 Click
7complement(2301639..2302505) PHAGE_Salmon_epsilon34: Ant; APP6_0812; phage(gi221328691) 4e-67 Click
8complement(2302821..2303591) hypothetical protein; APP6_0813 0.0 Click
9complement(2303676..2304347) PHAGE_Salmon_E1: hypothetical protein VIP0032; APP6_0814; phage(gi170676308) 1e-33 Click
10complement(2304378..2304878) PHAGE_Salmon_E1: major tail subunit; APP6_0815; phage(gi170676305) 5e-25 Click
11complement(2304888..2305259) PHAGE_Salmon_E1: hypothetical protein VIP0027; APP6_0816; phage(gi170676303) 2e-09 Click
12complement(2305256..2305681) PHAGE_Salmon_E1: hypothetical protein VIP0026; APP6_0817; phage(gi170676302) 2e-22 Click
13complement(2305608..2305970) PHAGE_Salmon_E1: hypothetical protein VIP0025; APP6_0818; phage(gi170676301) 3e-24 Click
14complement(2305973..2306338) PHAGE_Cronob_ENT47670: hypothetical protein; APP6_0819; phage(gi431810531) 3e-17 Click
15complement(2306603..2307658) PHAGE_Salmon_E1: putative coat protein; APP6_0820; phage(gi170676293) 2e-99 Click
16complement(2307668..2308105) PHAGE_Salmon_E1: putative capsid decoration protein; APP6_0821; phage(gi170676292) 3e-27 Click
17complement(2308105..2309457) PHAGE_Salmon_E1: hypothetical protein VIP0015; APP6_0822; phage(gi170676291) 9e-74 Click
18complement(2309454..2310299) PHAGE_Salmon_E1: putative head assembly protein; APP6_0823; phage(gi170676281) 2e-37 Click
19complement(2310340..2311692) PHAGE_Salmon_E1: putative portal protein; APP6_0824; phage(gi170676280) 4e-90 Click
20complement(2311689..2312918) PHAGE_Pseudo_phi297: terminase large subunit; APP6_0825; phage(gi374531285) 7e-150 Click
21complement(2312905..2313429) PHAGE_Aggreg_S1249: putative terminase small subunit TerS; APP6_0826; phage(gi273809571) 5e-47 Click
22complement(2314873..2316810) PHAGE_Clostr_st: exodeoxyribonuclease V, alpha subunit; APP6_0828; phage(gi80159748) 3e-20 Click