Vibrio mimicus SX-4 , whole genome shotgun sequence. [asmbl_id: NC_000000].4273352, GC%: 46.25%



Text file for download

            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 53 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1875812..876024 PHAGE_Lactoc_bIL312: Csp; PP_00784; phage(gi13095918) 3e-17 Click
2876244..876393 hypothetical; PP_00785 0.0 Click
3876406..876606 hypothetical protein VEA_003353 [Vibrio sp. Ex25] gi|262394124|ref|YP_003285978.1|; PP_00786 9e-13 Click
4complement(876940..877683) PHAGE_Aeromo_phiO18P: putative cI repressor; PP_00787; phage(gi148727133) 3e-33 Click
5877858..878082 PHAGE_Escher_D108: Ner; PP_00788; phage(gi281199646) 6e-17 Click
6878088..880094 PHAGE_Escher_D108: DNA transposition protein A; PP_00789; phage(gi281199647) 2e-172 Click
7880121..881065 PHAGE_Escher_D108: DNA transposition protein B; PP_00790; phage(gi281199648) 3e-79 Click
8881073..881297 hypothetical protein VC395_1282 [Vibrio cholerae O395] gi|227117631|ref|YP_002819527.1|; PP_00791 2e-32 Click
9881307..881876 hypothetical protein VC395_1281 [Vibrio cholerae O395] gi|227117630|ref|YP_002819526.1|; PP_00792 2e-37 Click
10881886..882206 hypothetical protein VC395_1280 [Vibrio cholerae O395] gi|227117629|ref|YP_002819525.1|; PP_00793 1e-50 Click
11882203..882400 hypothetical; PP_00794 0.0 Click
12882387..883001 PHAGE_Burkho_KS10: hypothetical protein KS10_gp21; PP_00795; phage(gi198449283) 9e-47 Click
13883011..883280 hypothetical protein VC395_1277 [Vibrio cholerae O395] gi|227117626|ref|YP_002819522.1|; PP_00796 8e-43 Click
14883277..883627 PHAGE_Yersin_PY54: hypothetical protein PY54p49; PP_00797; phage(gi33770558) 3e-18 Click
15883630..883899 PHAGE_Entero_phiEf11: asch domain protein; PP_00798; phage(gi282598726) 8e-15 Click
16883896..884426 PHAGE_Haemop_SuMu: hypothetical protein; PP_00799; phage(gi418489048) 1e-30 Click
17884506..884739 hypothetical protein VC395_1272 [Vibrio cholerae O395] gi|227117621|ref|YP_002819517.1|; PP_00800 2e-41 Click
18884749..884991 hypothetical; PP_00801 0.0 Click
19885003..885548 PHAGE_Escher_D108: hypothetical protein; PP_00802; phage(gi281199659) 1e-26 Click
20885538..885984 Mu phage periplasmic protein of unknown function [Shewanella oneidensis MR-1] gi|24374211|ref|NP_718254.1|; PP_00803 4e-27 Click
21886063..886479 PHAGE_Escher_D108: GemB; PP_00804; phage(gi281199660) 1e-18 Click
22886564..887121 PHAGE_Pelagi_HTVC008M: hypothetical protein; PP_00805; phage(gi460042628) 2e-18 Click
23887121..887411 hypothetical protein VC395_1267 [Vibrio cholerae O395] gi|227117616|ref|YP_002819512.1|; PP_00806 1e-37 Click
24887387..887986 hypothetical protein VC395_1266 [Vibrio cholerae O395] gi|227117615|ref|YP_002819511.1|; PP_00807 8e-91 Click
25887983..888213 hypothetical protein VC395_1265 [Vibrio cholerae O395] gi|227117614|ref|YP_002819510.1|; PP_00808 4e-37 Click
26888213..888515 PHAGE_Escher_D108: hypothetical protein; PP_00809; phage(gi281199668) 9e-08 Click
27888524..888814 PHAGE_Escher_D108: hypothetical protein; PP_00810; phage(gi281199669) 6e-23 Click
28888826..889404 PHAGE_Escher_D108: hypothetical protein; PP_00811; phage(gi281199670) 8e-31 Click
29889401..890876 PHAGE_Escher_D108: hypothetical protein; PP_00812; phage(gi281199671) 4e-27 Click
30890873..892432 PHAGE_Haemop_SuMu: portal protein gp29; PP_00813; phage(gi418489080) 2e-56 Click
31892425..893198 PHAGE_Escher_D108: virion morphogenesis; PP_00814; phage(gi281199673) 2e-34 Click
32893210..893458 hypothetical protein VC395_1258 [Vibrio cholerae O395] gi|227117607|ref|YP_002819503.1|; PP_00815 3e-37 Click
33893455..893967 PHAGE_Entero_RB43: hypothetical protein RB43ORF128w; PP_00816; phage(gi66391579) 1e-31 Click
34894356..895327 PHAGE_Rhodov_RS1: I protein; PP_00817; phage(gi472342914) 2e-20 Click
35895342..896241 PHAGE_Rhodov_RS1: major head protein; PP_00818; phage(gi472342916) 9e-50 Click
36896307..896804 hypothetical protein VC395_1251 [Vibrio cholerae O395] gi|227117600|ref|YP_002819496.1|; PP_00819 6e-71 Click
37896810..897244 PHAGE_Escher_D108: hypothetical protein; PP_00820; phage(gi281199680) 9e-08 Click
38897244..897786 PHAGE_Escher_D108: virion morphogenesis protein; PP_00821; phage(gi281199674) 1e-06 Click
39897783..898382 hypothetical protein VC395_1248 [Vibrio cholerae O395] gi|227117597|ref|YP_002819493.1|; PP_00822 7e-106 Click
40898396..898596 hypothetical protein VC395_1247 [Vibrio cholerae O395] gi|227117596|ref|YP_002819492.1|; PP_00823 7e-29 Click
41898599..900083 PHAGE_Escher_D108: tail sheath protein; PP_00824; phage(gi281199683) 1e-93 Click
42900098..900451 hypothetical protein VC395_1245 [Vibrio cholerae O395] gi|227117594|ref|YP_002819490.1|; PP_00825 1e-57 Click
43900451..900795 PHAGE_Escher_D108: hypothetical protein; PP_00826; phage(gi281199685) 2e-13 Click
44900800..900937 hypothetical; PP_00827 0.0 Click
45900921..902684 PHAGE_Salmon_ST64B: tail protein; PP_00828; phage(gi23505460) 2e-05 Click
46902696..904015 PHAGE_Escher_D108: DNA circularization protein; PP_00829; phage(gi281199688) 1e-20 Click
47904008..905084 PHAGE_Escher_D108: baseplate assembly protein; PP_00830; phage(gi281199689) 9e-47 Click
48905078..905695 PHAGE_Escher_D108: baseplate assembly protein; PP_00831; phage(gi281199690) 1e-21 Click
49905698..906147 PHAGE_Escher_D108: hypothetical protein; PP_00832; phage(gi281199691) 4e-19 Click
50906137..907204 PHAGE_Escher_D108: hypothetical protein; PP_00833; phage(gi281199692) 2e-45 Click
51907189..907776 PHAGE_Escher_D108: hypothetical protein; PP_00834; phage(gi281199693) 7e-16 Click
52907776..909077 PHAGE_Escher_D108: tail fiber protein; PP_00835; phage(gi281199694) 6e-06 Click
53909077..909616 PHAGE_Vibrio_vB_VchM_138: putative tail-fiber protein; PP_00836; phage(gi422936603) 5e-32 Click

Region 2, total : 13 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1complement(1539483..1540154) PHAGE_Lactob_phiAT3: putative repressor protein; PP_01425; phage(gi48697282) 1e-04 Click
21540226..1540444 hypothetical protein VC395_1917 [Vibrio cholerae O395] gi|227118252|ref|YP_002820148.1|; PP_01426 2e-08 Click
31540793..1541125 hypothetical protein Vch1786_I1295 [Vibrio cholerae O1 str. 2010EL-1786] gi|360035687|ref|YP_004937450.1|; PP_01427 6e-32 Click
41541127..1542098 PHAGE_Escher_PhaxI: recombination endonuclease subunit; PP_01428; phage(gi418488728) 5e-06 Click
51542105..1543862 PHAGE_Pseudo_B3: putative transposase A subunit; PP_01429; phage(gi56692580) 5e-93 Click
61544101..1544943 PHAGE_Pseudo_B3: putative transposase B subunit; PP_01430; phage(gi56692579) 2e-45 Click
71544946..1545407 hypothetical protein VC395_1912 [Vibrio cholerae O395] gi|227118248|ref|YP_002820144.1|; PP_01431 4e-83 Click
81546221..1546589 PHAGE_Entero_Mu: Mor; PP_01432; phage(gi9633507) 2e-06 Click
91546576..1546896 PHAGE_Escher_D108: GemB; PP_01433; phage(gi281199660) 4e-05 Click
101546915..1547493 hypothetical protein VC395_1908 [Vibrio cholerae O395] gi|227118244|ref|YP_002820140.1|; PP_01434 4e-98 Click
111547554..1547925 hypothetical protein VC395_1907 [Vibrio cholerae O395] gi|227118243|ref|YP_002820139.1|; PP_01435 5e-63 Click
121547974..1548333 PHAGE_Entero_Mu: hypothetical protein Mup41; PP_01436; phage(gi9633532) 2e-09 Click
131548468..1550159 PHAGE_Entero_Mu: putative tape measure protein; PP_01437; phage(gi9633533) 6e-33 Click