Bordetella pertussis B1831 , whole genome shotgun [asmbl_id: NC_000000].3819741, GC%: 68.00%



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            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 10 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1733031..733633 PHAGE_Equid__4: large tegument protein; PP_00716; phage(gi9629749) 2e-07 Click
2complement(733993..736107) PHAGE_Sulfol_STSV1: Adenine-specific DNA methylase; PP_00717; phage(gi51980138) 4e-15 Click
3complement(736261..736689) PHAGE_Entero_ST104: CI; PP_00718; phage(gi46358671) 5e-07 Click
4complement(736778..736933) PROPHAGE_Brucel_1330: ISBm3, transposase, programmed frameshift; PP_00719; phage(gi52430457) 5e-08 Click
5737327..737479 transposase [Bordetella pertussis Tohama I] gi|33594419|ref|NP_882063.1|; PP_00720 1e-12 Click
6737882..738019 filamentous hemagglutinin/adhesin [Bordetella pertussis Tohama I] gi|33592927|ref|NP_880571.1|; PP_00721 2e-09 Click
7complement(738026..738460) PHAGE_Salmon_1: putative bacteriophage tail fiber protein; Lambda gpN homolog; PP_00722; phage(gi169257204) 1e-05 Click
8complement(738457..738807) flagellar protein FliT [Bordetella pertussis Tohama I] gi|33592506|ref|NP_880150.1|; PP_00723 1e-58 Click
9complement(738855..739283) flagellar protein FliS [Bordetella pertussis Tohama I] gi|33592507|ref|NP_880151.1|; PP_00724 1e-72 Click
10complement(739291..740664) PHAGE_Lactob_phiAT3: putative minor tail protein; PP_00725; phage(gi48697271) 2e-05 Click

Region 2, total : 19 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
12227206..2227973 PROPHAGE_Escher_CFT073: transposase; PP_02175; phage(gi26248352) 4e-11 Click
2complement(2227951..2228751) inner membrane component of binding-protein-dependent transport system [Bordetella pertussis Tohama I] gi|33591377|ref|NP_879021.1|; PP_02176 5e-149 Click
3complement(2228748..2229623) inner membrane component of binding-protein-dependent transport system [Bordetella pertussis Tohama I] gi|33591378|ref|NP_879022.1|; PP_02177 7e-169 Click
4complement(2229634..2230926) glycerol-3-phosphate ABC transporter substrate-binding protein [Bordetella pertussis Tohama I] gi|33591379|ref|NP_879023.1|; PP_02178 0.0 Click
5complement(2230969..2232009) PHAGE_Plankt_PaV_LD: ABC transporter; PP_02179; phage(gi371496158) 4e-24 Click
6complement(2232115..2232936) cAMP phosphodiesterase [Bordetella pertussis Tohama I] gi|33591381|ref|NP_879025.1|; PP_02180 2e-160 Click
72233005..2233595 PHAGE_Burkho_KL1: major capsid protein; PP_02181; phage(gi399528725) 4e-43 Click
82233605..2233856 hypothetical protein BP3376 [Bordetella pertussis Tohama I] gi|33594264|ref|NP_881908.1|; PP_02182 7e-42 Click
92233919..2234401 PHAGE_Pseudo_YuA: structural phage protein; PP_02183; phage(gi162135145) 1e-15 Click
102234472..2234603 hypothetical protein BP3374 [Bordetella pertussis Tohama I] gi|33594262|ref|NP_881906.1|; PP_02184 3e-16 Click
112234603..2234998 PHAGE_Cyanop_KBS_S_2A: hypothetical protein; PP_02185; phage(gi472341510) 1e-08 Click
122234995..2235393 PHAGE_Cronob_phiES15: hypothetical protein; PP_02186; phage(gi401817600) 3e-18 Click
132235390..2235812 PHAGE_Cronob_phiES15: hypothetical protein; PP_02187; phage(gi401817601) 3e-06 Click
14complement(2235856..2236002) hypothetical; PP_02188 0.0 Click
152236752..2237093 PHAGE_Xantho_phiL7: P12; PP_02189; phage(gi238695599) 6e-22 Click
162237103..2237432 PHAGE_Cronob_phiES15: hypothetical protein; PP_02190; phage(gi401817603) 2e-13 Click
172237766..2240378 PHAGE_Pseudo_MP29: putative tail component protein; PP_02191; phage(gi215480016) 2e-83 Click
182240872..2241348 PHAGE_Burkho_BcepGomr: BcepGomrgp20; PP_02192; phage(gi146329932) 4e-37 Click
192241640..2245683 PHAGE_Burkho_phiE125: putative tail tip fiber protein; PP_02193; phage(gi17975182) 2e-44 Click

Region 3, total : 16 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
13418632..3418646 attL    CGGCAGATGGCAGCA 0.0 Click
23433354..3433821 PHAGE_Burkho_Bcep176: gp36; PP_03394; phage(gi77864661) 6e-48 Click
33433862..3433987 hypothetical protein BB2195 [Bordetella bronchiseptica RB50] gi|33601178|ref|NP_888738.1|; PP_03395 9e-15 Click
43434100..3434432 hypothetical protein BP0511 [Bordetella pertussis Tohama I] gi|33591719|ref|NP_879363.1|; PP_03396 5e-55 Click
53434429..3434611 phage-related membrane protein [Bordetella pertussis Tohama I] gi|33591718|ref|NP_879362.1|; PP_03397 3e-25 Click
63434615..3435601 PHAGE_Marino_P12026: RecT protein; PP_03398; phage(gi399528364) 1e-60 Click
73435598..3436245 PHAGE_Marino_P12026: phage exonuclease; PP_03399; phage(gi399528365) 2e-15 Click
83436303..3436830 hypothetical protein BP0507 [Bordetella pertussis Tohama I] gi|33591715|ref|NP_879359.1|; PP_03400 3e-95 Click
93436867..3438051 PHAGE_Acinet_Ac42: hypothetical protein; PP_03401; phage(gi311992508) 4e-08 Click
103438089..3438403 PHAGE_Burkho_BcepC6B: hypothetical protein BcepC6B_gp26; PP_03402; phage(gi48697216) 2e-09 Click
113438396..3438515 hypothetical protein BP0504 [Bordetella pertussis Tohama I] gi|33591712|ref|NP_879356.1|; PP_03403 5e-14 Click
123438516..3438716 hypothetical protein BP0503 [Bordetella pertussis Tohama I] gi|33591711|ref|NP_879355.1|; PP_03404 1e-32 Click
13complement(3438713..3439450) PHAGE_Mannhe_phiMHaA1: integrase; PP_03405; phage(gi109289985) 7e-36 Click
143439886..3441163 PHAGE_Ectoca_1: EsV-1-186; PP_03406; phage(gi13242656) 1e-05 Click
15complement(3441189..3443159) PHAGE_Salmon_SSU5: putative phage tail fiber protein; PP_03407; phage(gi410491431) 3e-06 Click
163443401..3443799 hypothetical protein BP0499 [Bordetella pertussis Tohama I] gi|33591707|ref|NP_879351.1|; PP_03408 8e-70 Click
17complement(3443808..3444731) PHAGE_Burkho_phi1026b: gp58; PP_03409; phage(gi38707948) 1e-12 Click
183453395..3453409 attR    CGGCAGATGGCAGCA 0.0 Click