Lactobacillus gasseri SV-16A-US .1, whole genome shotgun [asmbl_id: NC_000000].1985958, GC%: 34.81%



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            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 8 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1331466..331478 attL    TCCAGAAGTTTTA 0.0 Click
2344843..346291 PHAGE_Vibrio_ICP1: putative Gp5 baseplate hub subunit and tail lysozyme; PP_00345; phage(gi325171175) 4e-08 Click
3346294..347133 GTPase [Lactobacillus gasseri ATCC 33323] gi|116629568|ref|YP_814740.1|; PP_00346 1e-158 Click
4347130..347882 PHAGE_Cafete_BV_PW1: putative ribonuclease HII; PP_00347; phage(gi310831397) 3e-28 Click
5347934..348779 Rossmann fold nucleotide-binding protein for DNA uptake [Lactobacillus gasseri ATCC 33323] gi|116629570|ref|YP_814742.1|; PP_00348 2e-155 Click
6348845..350926 PHAGE_Acanth_mimivirus: DNA topoisomerase 1; PP_00349; phage(gi311977597) 6e-104 Click
7351024..352340 tRNA (uracil-5-)-methyltransferase Gid [Lactobacillus gasseri ATCC 33323] gi|116629572|ref|YP_814744.1|; PP_00350 0.0 Click
8351977..351989 attR    TCCAGAAGTTTTA 0.0 Click
9352343..353266 PHAGE_Staphy_PT1028: ORF002; PP_00351; phage(gi66395166) 2e-12 Click
10353271..353795 PROPHAGE_Escher_Sakai: ATP-dependent protease peptidase subunit; PP_00352; phage(gi15834113) 1e-40 Click
11353806..355200 PROPHAGE_Escher_Sakai: ATP-dependent protease ATP-binding subunit HslU; PP_00353; phage(gi15834112) 7e-117 Click

Region 2, total : 66 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1complement(697279..697974) PHAGE_Feldma_virus: putative sensor histidine kinase; PP_00708; phage(gi197322366) 5e-06 Click
2complement(697989..698354) integral membrane protein [Lactobacillus gasseri ATCC 33323] gi|116629894|ref|YP_815066.1|; PP_00709 2e-66 Click
3complement(698406..699371) phosphomannose isomerase [Lactobacillus gasseri ATCC 33323] gi|116629895|ref|YP_815067.1|; PP_00710 0.0 Click
4complement(699432..699998) hypothetical protein LJ0915 [Lactobacillus johnsonii NCC 533] gi|42518840|ref|NP_964770.1|; PP_00711 3e-81 Click
5699860..699871 attL    CATCTGGAATAA 0.0 Click
6complement(700012..700491) hypothetical protein LGAS_1265 [Lactobacillus gasseri ATCC 33323] gi|116629896|ref|YP_815068.1|; PP_00712 7e-89 Click
7complement(700736..702526) PHAGE_Parame_AR158: hypothetical protein AR158_C024L; PP_00713; phage(gi157953215) 2e-07 Click
8complement(702510..703103) PHAGE_Equid__4: envelope glycoprotein J; PP_00714; phage(gi9629801) 1e-09 Click
9complement(703900..704832) PHAGE_Lactob_phiadh: lysin; PP_00715; phage(gi9633062) 1e-126 Click
10complement(704842..705273) PHAGE_Lactob_KC5a: holin; PP_00716; phage(gi90592634) 8e-41 Click
11complement(705270..705548) PHAGE_Lactob_KC5a: hypothetical protein; PP_00717; phage(gi90592633) 2e-44 Click
12complement(705559..705969) PHAGE_Lactob_KC5a: unknown; PP_00718; phage(gi90592636) 2e-54 Click
13complement(705935..706129) PHAGE_Lactob_KC5a: hypothetical protein; PP_00719; phage(gi90592632) 9e-29 Click
14complement(706129..706647) PHAGE_Lactob_KC5a: hypothetical protein; PP_00720; phage(gi90592631) 5e-73 Click
15complement(706687..708858) PHAGE_Lactob_KC5a: hypothetical protein; PP_00721; phage(gi90592630) 0.0 Click
16complement(708871..709431) PHAGE_Lactob_KC5a: hypothetical protein; PP_00722; phage(gi90592629) 2e-95 Click
17complement(709421..710572) PHAGE_Lactob_KC5a: putative tail protein; PP_00723; phage(gi90592628) 0.0 Click
18complement(710569..710940) PHAGE_Lactob_KC5a: hypothetical protein; PP_00724; phage(gi90592627) 6e-65 Click
19complement(710942..711127) PHAGE_Lactob_KC5a: hypothetical protein; PP_00725; phage(gi90592626) 3e-29 Click
20complement(711283..712329) PHAGE_Lactob_KC5a: hypothetical protein; PP_00726; phage(gi90592625) 0.0 Click
21complement(712326..713006) PHAGE_Lactob_KC5a: putative LysM-like protein; PP_00727; phage(gi90592624) 3e-130 Click
22complement(713008..716418) PHAGE_Lactob_KC5a: putative minor tail protein; PP_00728; phage(gi90592623) 0.0 Click
23complement(716464..716580) hypothetical protein LGAS_0681 [Lactobacillus gasseri ATCC 33323] gi|116629339|ref|YP_814511.1|; PP_00729 2e-11 Click
24complement(716655..717074) PHAGE_Lactob_KC5a: hypothetical protein; PP_00730; phage(gi90592622) 3e-72 Click
25complement(717086..717556) PHAGE_Lactob_KC5a: putative phage core tail protein; PP_00731; phage(gi90592621) 9e-84 Click
26complement(717568..718923) PHAGE_Lactob_KC5a: putative phage sheath tail protein; PP_00732; phage(gi90592620) 0.0 Click
27complement(718923..719105) PHAGE_Lactob_KC5a: hypothetical protein; PP_00733; phage(gi90592619) 2e-26 Click
28complement(719125..719532) PHAGE_Lactob_KC5a: hypothetical protein; PP_00734; phage(gi90592618) 3e-71 Click
29complement(719529..719963) PHAGE_Lactob_KC5a: hypothetical protein; PP_00735; phage(gi90592617) 3e-77 Click
30complement(719960..720322) PHAGE_Lactob_KC5a: hypothetical protein; PP_00736; phage(gi90592616) 2e-60 Click
31complement(720319..720711) PHAGE_Lactob_KC5a: hypothetical protein; PP_00737; phage(gi90592615) 3e-31 Click
32complement(720720..721760) PHAGE_Lactob_KC5a: putative phage major capsid protein; PP_00738; phage(gi90592614) 0.0 Click
33complement(721765..722319) PHAGE_Lactob_KC5a: putative phage minor capsid protein; PP_00739; phage(gi90592613) 5e-99 Click
34complement(722439..723593) PHAGE_Lactob_KC5a: putative phage head protein; PP_00740; phage(gi90592612) 0.0 Click
35complement(723583..724995) PHAGE_Lactob_KC5a: putative phage portal protein; PP_00741; phage(gi90592611) 0.0 Click
36complement(724986..726215) PHAGE_Lactob_KC5a: putative phage terminase large subunit B; PP_00742; phage(gi90592610) 0.0 Click
37complement(726178..726687) PHAGE_Lactob_Lj771: small terminase subunit; PP_00743; phage(gi163932180) 6e-84 Click
38complement(726763..726960) PHAGE_Entero_phiFL3A: hypothetical protein; PP_00744; phage(gi281416250) 2e-11 Click
39complement(727010..728119) PHAGE_Lister_B054: gp77; PP_00745; phage(gi157325361) 9e-101 Click
40complement(728173..728316) PHAGE_Lactob_KC5a: putative transcriptional regulator; PP_00746; phage(gi90592604) 5e-21 Click
41complement(728375..728581) hypothetical protein LVIS_2215 [Lactobacillus brevis ATCC 367] gi|116334769|ref|YP_796296.1|; PP_00747 8e-13 Click
42complement(728728..728880) hypothetical; PP_00748 0.0 Click
43complement(729186..729259) tRNA 0.0 Click
44complement(729913..730422) PHAGE_Lactob_KC5a: hypothetical protein; PP_00749; phage(gi90592602) 6e-89 Click
45complement(730452..730619) PHAGE_Lactob_KC5a: hypothetical protein; PP_00750; phage(gi90592601) 2e-27 Click
46complement(730606..730746) PHAGE_Lactob_KC5a: hypothetical protein; PP_00751; phage(gi90592600) 3e-18 Click
47complement(730851..731129) PHAGE_Lactob_KC5a: hypothetical protein; PP_00752; phage(gi90592599) 1e-16 Click
48complement(731119..731250) hypothetical protein LGAS_0655 [Lactobacillus gasseri ATCC 33323] gi|116629315|ref|YP_814487.1|; PP_00753 8e-19 Click
49complement(731375..731635) PHAGE_Lactob_KC5a: hypothetical protein; PP_00754; phage(gi90592598) 6e-22 Click
50complement(731636..732097) PHAGE_Lactob_KC5a: putative holiday junction resolvase; PP_00755; phage(gi90592597) 2e-81 Click
51complement(732094..732255) hypothetical; PP_00756 0.0 Click
52complement(732457..732756) PHAGE_Lactob_KC5a: hypothetical protein; PP_00757; phage(gi90592594) 2e-48 Click
53complement(732761..732970) PHAGE_Lactob_KC5a: hypothetical protein; PP_00758; phage(gi90592593) 5e-33 Click
54complement(732980..733165) PHAGE_Lactob_KC5a: hypothetical protein; PP_00759; phage(gi90592592) 2e-27 Click
55complement(733180..733965) PHAGE_Lactob_KC5a: putative anti-repressor; PP_00760; phage(gi90592591) 4e-117 Click
56complement(733958..734263) PHAGE_Lactob_KC5a: putative transcriptional regulator; PP_00761; phage(gi90592588) 3e-18 Click
57complement(734269..735174) PHAGE_Lactob_Lj928: hypothetical protein Ljo_1448; PP_00762; phage(gi41179305) 7e-45 Click
58complement(735189..735989) PHAGE_Lactob_KC5a: hypothetical protein; PP_00763; phage(gi90592586) 7e-117 Click
59complement(735995..736273) PHAGE_Lactob_KC5a: hypothetical protein; PP_00764; phage(gi90592585) 7e-48 Click
60complement(736273..736599) PHAGE_Lactob_KC5a: hypothetical protein; PP_00765; phage(gi90592584) 5e-59 Click
61complement(736912..737190) PHAGE_Lactob_KC5a: hypothetical protein; PP_00766; phage(gi90592582) 5e-40 Click
62complement(737195..737530) PHAGE_Lactob_KC5a: hypothetical protein; PP_00767; phage(gi90592581) 6e-60 Click
63complement(737543..737749) hypothetical; PP_00768 0.0 Click
64complement(737784..738017) PHAGE_Lactob_Lj771: hypothetical protein LJ771_005; PP_00769; phage(gi163932157) 8e-12 Click
65738187..738531 PHAGE_Lactob_KC5a: putative transcriptional regulator; PP_00770; phage(gi90592579) 6e-23 Click
66738705..738989 PHAGE_Lactob_KC5a: hypothetical protein; PP_00771; phage(gi90592578) 5e-48 Click
67739050..739676 PHAGE_Lactob_KC5a: hypothetical protein; PP_00772; phage(gi90592577) 4e-106 Click
68739349..739360 attR    CATCTGGAATAA 0.0 Click
69739745..740854 PHAGE_Lactob_KC5a: integrase; PP_00773; phage(gi90592576) 7e-56 Click

Region 3, total : 56 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1875359..875370 attL    CCTCAAAAAGCT 0.0 Click
2complement(889745..890689) PHAGE_Lactob_Lj965: putative lysin; PP_00931; phage(gi41179263) 2e-108 Click
3complement(890727..891164) PHAGE_Lactob_Lj965: putative holin; PP_00932; phage(gi41179254) 3e-07 Click
4complement(891164..891358) PHAGE_Lactob_Lj928: hypothetical protein Ljo_1420; PP_00933; phage(gi41179335) 2e-22 Click
5complement(891351..891536) hypothetical; PP_00934 0.0 Click
6complement(891549..891950) PHAGE_Lactob_Lj965: hypothetical protein Ljo_0326; PP_00935; phage(gi41179252) 1e-06 Click
7complement(892012..892134) hypothetical; PP_00936 0.0 Click
8complement(892109..892321) PHAGE_Lactob_phiadh: hypothetical protein phiadhp58; PP_00937; phage(gi9633058) 8e-12 Click
9complement(892321..892815) PHAGE_Lactob_phiadh: hypothetical protein phiadhp57; PP_00938; phage(gi9633057) 3e-42 Click
10complement(892869..894239) PHAGE_Lactob_phiadh: hypothetical protein phiadhp56; PP_00939; phage(gi9633056) 5e-82 Click
11complement(894239..894493) hypothetical; PP_00940 0.0 Click
12complement(894544..895878) PHAGE_Lactob_phig1e: hypothetical protein phig1ep22; PP_00941; phage(gi23455812) 2e-30 Click
13complement(895893..896714) PHAGE_Staphy_StB20: tail protein; PP_00942; phage(gi431809781) 5e-12 Click
14complement(896707..901791) PHAGE_Strept_DT1: putative tail component protein; PP_00943; phage(gi29165636) 5e-137 Click
15complement(901795..902412) PHAGE_Lactob_phig1e: hypothetical protein phig1ep25; PP_00944; phage(gi23455810) 4e-24 Click
16complement(902417..902845) hypothetical protein LA2_07635 [Lactobacillus amylovorus GRL 1112] gi|315038673|ref|YP_004032241.1|; PP_00945 4e-09 Click
17complement(902881..903459) PHAGE_Lactob_phig1e: minor capsid protein; PP_00946; phage(gi23455808) 4e-28 Click
18complement(903472..903873) PHAGE_Lactob_phig1e: minor capsid protein; PP_00947; phage(gi23455807) 2e-15 Click
19complement(903866..904237) PHAGE_Lactob_phig1e: minor capsid protein; PP_00948; phage(gi23455806) 9e-19 Click
20complement(904247..904597) PHAGE_Lactob_phig1e: minor capsid protein; PP_00949; phage(gi23455805) 3e-23 Click
21complement(904591..904980) PHAGE_Bacill_BCJA1c: hypothetical protein BCBBV1cgp42; PP_00950; phage(gi56694910) 1e-10 Click
22complement(904999..906051) PHAGE_Lactob_phig1e: minor capsid protein; PP_00951; phage(gi23455804) 4e-103 Click
23complement(906056..906685) PHAGE_Lactob_phig1e: minor capsid protein; PP_00952; phage(gi23455803) 6e-27 Click
24complement(906780..907925) PHAGE_Lactob_phig1e: minor capsid protein; PP_00953; phage(gi23455801) 9e-75 Click
25complement(907876..909510) PHAGE_Lactob_phig1e: minor capsid protein; PP_00954; phage(gi23455800) 9e-111 Click
26complement(909523..910830) PHAGE_Lactob_H: putative terminase large subunit; PP_00955; phage(gi148750837) 1e-167 Click
27complement(910796..911473) PHAGE_Entero_phiFL4A: terminase small subunit; PP_00956; phage(gi281416464) 4e-31 Click
28complement(911489..911626) hypothetical; PP_00957 0.0 Click
29complement(911627..912340) PHAGE_Riemer_RAP44: ParB-like nuclease; PP_00958; phage(gi418489898) 2e-24 Click
30complement(912343..912840) hypothetical protein LA2_07730 [Lactobacillus amylovorus GRL 1112] gi|315038692|ref|YP_004032260.1|; PP_00959 2e-31 Click
31complement(912852..913505) PHAGE_Riemer_RAP44: adenine nucleotide alpha hydrolase-like protein; PP_00960; phage(gi418489897) 2e-20 Click
32complement(913545..914012) PHAGE_Crocei_P2559S: hypothetical protein; PP_00961; phage(gi399528698) 8e-05 Click
33complement(914043..914117) tRNA 0.0 Click
34complement(914894..915391) PHAGE_Lactob_Lj965: hypothetical protein Ljo_0303; PP_00962; phage(gi41179235) 2e-06 Click
35complement(915407..915598) hypothetical protein [Lactobacillus johnsonii DPC 6026] gi|385825727|ref|YP_005862069.1|; PP_00963 5e-26 Click
36complement(915621..915833) PHAGE_Lactob_Lj771: hypothetical protein LJ771_024; PP_00964; phage(gi163932176) 3e-23 Click
37complement(915814..915951) hypothetical protein LGAS_0655 [Lactobacillus gasseri ATCC 33323] gi|116629315|ref|YP_814487.1|; PP_00965 2e-14 Click
38complement(916032..916493) PHAGE_Lactob_Lj771: holliday junction resolvase; PP_00966; phage(gi163932172) 1e-81 Click
39complement(916490..916651) hypothetical; PP_00967 0.0 Click
40complement(916968..917237) PHAGE_Lactob_phiadh: hypothetical protein phiadhp26; PP_00968; phage(gi9633026) 1e-06 Click
41complement(917255..917803) PHAGE_Lactob_Lj928: hypothetical protein Ljo_1445; PP_00969; phage(gi41179308) 3e-84 Click
42complement(918139..918441) hypothetical; PP_00970 0.0 Click
43complement(918431..918673) PHAGE_Lactob_Lj965: hypothetical protein Ljo_0301; PP_00971; phage(gi41179233) 2e-44 Click
44complement(918705..919295) PHAGE_Lactob_Lj965: putative replication protein; PP_00972; phage(gi41179232) 2e-34 Click
45919267..919425 hypothetical; PP_00973 0.0 Click
46complement(919417..920220) PHAGE_Lactob_Lj965: putative replication protein; PP_00974; phage(gi41179231) 2e-17 Click
47complement(920223..921113) PHAGE_Lactob_Lj965: hypothetical protein Ljo_0298; PP_00975; phage(gi41179230) 2e-71 Click
48complement(921144..921296) PHAGE_Lactob_Lj928: putative recombination protein; PP_00976; phage(gi41179302) 3e-15 Click
49complement(921444..921728) hypothetical protein LA2_05595 [Lactobacillus amylovorus GRL 1112] gi|315038305|ref|YP_004031873.1|; PP_00977 1e-07 Click
50complement(921742..922530) PHAGE_Lactob_Lj965: putative antirepressor; PP_00978; phage(gi41179234) 3e-57 Click
51complement(922543..922770) PHAGE_Strept_Sfi21: cro-repressor; PP_00979; phage(gi9632966) 5e-11 Click
52922920..923528 PHAGE_Lactob_Lrm1: CI-like repressor; PP_00980; phage(gi195661226) 3e-26 Click
53923539..924132 Prophage protein [Lactobacillus helveticus R0052] gi|403515030|ref|YP_006655850.1|; PP_00981 3e-14 Click
54924157..924810 PHAGE_Lactob_phiadh: hypothetical protein phiadhp03; PP_00982; phage(gi9633003) 4e-14 Click
55924628..924639 attR    CCTCAAAAAGCT 0.0 Click
56924997..926121 PHAGE_Lactob_Lj965: putative integrase; PP_00983; phage(gi41179218) 2e-89 Click
57complement(926235..926831) dephospho-CoA kinase [Lactobacillus gasseri ATCC 33323] gi|116630046|ref|YP_815218.1|; PP_00984 3e-107 Click
58complement(926828..927658) PHAGE_Bacill_SP10: formamidopyrimidine-DNA glycosylase; PP_00985; phage(gi418489574) 6e-27 Click
59complement(927674..930334) PHAGE_Bacill_SP10: DNA polymerase; PP_00986; phage(gi418489633) 6e-61 Click