Bilophila wadsworthia 3_1_6 .1, whole genome shotgun sequence. [asmbl_id: NC_000000].4374199, GC%: 59.32%



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            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 23 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1177485..177496 attL    AAGGGGGCCGTG 0.0 Click
2complement(192274..192645) PROPHAGE_Shewan_MR-1: ISSod13, transposase; HMPREF0179_00142; phage(gi24375047) 2e-51 Click
3complement(193077..193676) PHAGE_Lactob_Lrm1: integrase; HMPREF0179_00143; phage(gi195661224) 2e-10 Click
4194147..194158 attR    AAGGGGGCCGTG 0.0 Click
5complement(194166..194468) hypothetical protein; HMPREF0179_00144 0.0 Click
6complement(194478..194708) hypothetical protein; HMPREF0179_00145 0.0 Click
7195150..195476 hypothetical protein; HMPREF0179_00146 0.0 Click
8complement(195558..196574) PHAGE_Pseudo_phi297: putative RecT protein; HMPREF0179_00147; phage(gi374531258) 4e-62 Click
9complement(196578..197381) PHAGE_Pseudo_phi297: hypothetical protein; HMPREF0179_00148; phage(gi374531259) 1e-53 Click
10complement(197515..197808) hypothetical protein; HMPREF0179_00149 0.0 Click
11complement(197897..198139) hypothetical protein; HMPREF0179_00150 0.0 Click
12198671..198931 hypothetical protein; HMPREF0179_00151 0.0 Click
13200745..201197 hypothetical protein; HMPREF0179_00152 0.0 Click
14201194..201496 hypothetical protein; HMPREF0179_00153 0.0 Click
15201490..201975 PHAGE_Staphy_P954: DNA methyltransferase; HMPREF0179_00154; phage(gi257136381) 4e-28 Click
16201960..202436 PHAGE_Mycoba_Ardmore: gp60; HMPREF0179_00155; phage(gi291084918) 5e-05 Click
17202925..203287 hypothetical protein; HMPREF0179_00156 0.0 Click
18203300..203719 PHAGE_Pseudo_phi297: holliday junction resolvase; HMPREF0179_00157; phage(gi374531280) 3e-09 Click
19203712..203915 hypothetical protein; HMPREF0179_00158 0.0 Click
20203915..204289 hypothetical protein; HMPREF0179_00159 0.0 Click
21complement(204320..204928) Eco29kI restriction endonuclease; HMPREF0179_00160 0.0 Click
22complement(204928..206133) PHAGE_Thermu_26: C5 cytosine-specific DNA methylase; HMPREF0179_00161; phage(gi157265426) 7e-25 Click
23complement(206155..206568) PHAGE_Burkho_KL3: gp46; HMPREF0179_00162; phage(gi327198091) 8e-37 Click
24206888..207205 PHAGE_Bacter_8: putative peptidase; HMPREF0179_00163; phage(gi200003966) 1e-09 Click
25207331..207612 PHAGE_Bacter_8: putative peptidase; HMPREF0179_00164; phage(gi200003966) 2e-08 Click

Region 2, total : 19 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1complement(426040..426786) PHAGE_Bordet_1: adenine DNA methyltransferase; HMPREF0179_00354; phage(gi41179391) 7e-58 Click
2complement(426764..426955) Mu-like prophage protein Com; HMPREF0179_00355 0.0 Click
3complement(427204..428244) PHAGE_Bordet_1: reverse transcriptase; HMPREF0179_00356; phage(gi41179367) 4e-43 Click
4428224..428643 palmitoyltransferase ZDHHC18; HMPREF0179_00357 0.0 Click
5complement(428918..429343) hypothetical protein; HMPREF0179_00358 0.0 Click
6complement(429343..429636) PHAGE_Haemop_SuMu: transcription regulator; HMPREF0179_00359; phage(gi418489036) 1e-05 Click
7complement(429663..429962) PHAGE_Haemop_Aaphi23: hypothetical protein Aaphi23p52; HMPREF0179_00360; phage(gi45862234) 7e-10 Click
8complement(429959..430381) hypothetical protein; HMPREF0179_00361 0.0 Click
9complement(430368..430631) SH3 type 3 domain-containing protein; HMPREF0179_00362 0.0 Click
10complement(430701..432182) PHAGE_Salico_CGphi29: hypothetical protein; HMPREF0179_00363; phage(gi472340194) 2e-05 Click
11complement(432192..435383) PHAGE_Entero_phiEF24C: putative adsorption associated tail protein; HMPREF0179_00364; phage(gi158079337) 5e-74 Click
12complement(435393..435920) PHAGE_Bacill_SPO1: gp16.1; HMPREF0179_00365; phage(gi209972921) 1e-05 Click
13complement(436010..437247) hypothetical protein; HMPREF0179_00366 0.0 Click
14complement(437248..438435) PHAGE_Haemop_HP2: orf29; HMPREF0179_00367; phage(gi17981845) 9e-17 Click
15complement(438386..438859) PHAGE_Bacill_SP10: phage baseplate assembly protein W; HMPREF0179_00368; phage(gi418489598) 6e-05 Click
16complement(438972..439706) PHAGE_Haemop_HP2: orf35; HMPREF0179_00369; phage(gi17981851) 2e-07 Click
17complement(439708..440526) hypothetical protein; HMPREF0179_00370 0.0 Click
18complement(440523..441056) hypothetical protein; HMPREF0179_00371 0.0 Click
19complement(441053..443575) PHAGE_Vibrio_vB_VpaM_MAR: tail length tape-measure protein; HMPREF0179_00372; phage(gi428782750) 1e-100 Click

Region 3, total : 30 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1complement(455738..457213) PHAGE_Burkho_BcepMu: gp28; HMPREF0179_00387; phage(gi48696938) 1e-125 Click
2complement(457210..457827) hypothetical protein; HMPREF0179_00388 0.0 Click
3complement(457837..458076) hypothetical protein; HMPREF0179_00389 0.0 Click
4complement(458073..458474) transcription-associated protein 1; HMPREF0179_00390 0.0 Click
5complement(458471..458734) translation initiation factor IF-2; HMPREF0179_00391 0.0 Click
6complement(458688..459038) hypothetical protein; HMPREF0179_00392 0.0 Click
7complement(459035..459676) PHAGE_Burkho_BcepMu: gp22; HMPREF0179_00393; phage(gi48696932) 4e-55 Click
8complement(459802..460161) PHAGE_Burkho_BcepMu: gp21; HMPREF0179_00394; phage(gi48696931) 9e-21 Click
9complement(460330..460782) excisionase family DNA binding domain-containing protein; HMPREF0179_00395 0.0 Click
10complement(460785..461138) collagen alpha-1(V) chain; HMPREF0179_00396 0.0 Click
11complement(461131..461604) PHAGE_Pseudo_B3: hypothetical protein B3ORF2; HMPREF0179_00397; phage(gi56692570) 8e-05 Click
12complement(461612..462040) hypothetical protein; HMPREF0179_00398 0.0 Click
13complement(462045..462233) nrdD protein; HMPREF0179_00399 0.0 Click
14complement(462710..462874) hypothetical protein; HMPREF0179_00400 0.0 Click
15complement(463015..463674) PHAGE_Pseudo_JBD24: hypothetical protein; HMPREF0179_00401; phage(gi448245062) 8e-09 Click
16complement(463760..464017) 50S ribosomal protein L15; HMPREF0179_00402 0.0 Click
17complement(464254..464547) PHAGE_Burkho_BcepMu: gp04; HMPREF0179_00403; phage(gi48696914) 9e-11 Click
18complement(464558..464812) hypothetical protein; HMPREF0179_00404 0.0 Click
19complement(464824..465336) PHAGE_Haemop_SuMu: host-nuclease inhibitor protein; HMPREF0179_00405; phage(gi418489043) 1e-07 Click
20complement(465336..465617) hypothetical protein; HMPREF0179_00406 0.0 Click
21complement(465647..466357) PHAGE_Pseudo_MP42: DNA transposition protein; HMPREF0179_00407; phage(gi399528586) 3e-14 Click
22complement(466387..468573) PHAGE_Pseudo_MP22: transposase A; HMPREF0179_00408; phage(gi157834977) 5e-18 Click
23complement(468583..468825) hypothetical protein; HMPREF0179_00409 0.0 Click
24469040..469666 bacteriophage CI repressor helix-turn-helix domain-containing protein; HMPREF0179_00410 0.0 Click
25470118..470891 branched-chain amino acid transport system substrate-binding protein; HMPREF0179_00411 0.0 Click
26471033..471938 PHAGE_Lactob_KC5a: putative minor tail protein; HMPREF0179_00412; phage(gi90592623) 2e-06 Click
27471935..472975 branched-chain amino acid transport system/permease component; HMPREF0179_00413 0.0 Click
28472972..473733 PHAGE_Plankt_PaV_LD: ABC transporter; HMPREF0179_00414; phage(gi371496158) 1e-15 Click
29473890..474636 PHAGE_Plankt_PaV_LD: ABC transporter; HMPREF0179_00415; phage(gi371496158) 4e-16 Click
30complement(474934..477945) PHAGE_Ostreo_OlV1: hypothetical protein; HMPREF0179_00416; phage(gi313844163) 1e-05 Click

Region 4, total : 18 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
11885168..1886640 PHAGE_Burkho_phiE255: gp13, phage tail sheath protein; HMPREF0179_01574; phage(gi134288804) 2e-41 Click
21886651..1887175 PHAGE_Vibrio_vB_VpaM_MAR: tail tube protein; HMPREF0179_01575; phage(gi428782747) 1e-07 Click
31887187..1887528 hypothetical protein; HMPREF0179_01576 0.0 Click
41887634..1890792 PHAGE_Vibrio_VP882: phage-related tail protein; HMPREF0179_01577; phage(gi126010872) 2e-63 Click
51890782..1890991 hypothetical protein; HMPREF0179_01578 0.0 Click
61890991..1892028 PHAGE_Salmon_RE_2010: gene D protein; HMPREF0179_01579; phage(gi418489726) 2e-20 Click
71892028..1892678 PHAGE_Pseudo_phiCTX: predicted baseplate; HMPREF0179_01580; phage(gi17313235) 1e-17 Click
81892675..1893067 PHAGE_Salmon_RE_2010: tail protein; HMPREF0179_01581; phage(gi418489725) 2e-05 Click
91893067..1893408 hypothetical protein; HMPREF0179_01582 0.0 Click
101893395..1894525 PHAGE_Salmon_RE_2010: baseplate assembly protein J; HMPREF0179_01583; phage(gi418489711) 6e-18 Click
111894518..1895258 PHAGE_Salmon_RE_2010: tail protein I; HMPREF0179_01584; phage(gi418489712) 6e-08 Click
121895255..1896194 PHAGE_Salmon_RE_2010: tail fiber protein; HMPREF0179_01585; phage(gi418489713) 2e-29 Click
131896656..1897258 hypothetical protein; HMPREF0179_01586 0.0 Click
141897419..1898933 PHAGE_Salisa_1: gp43; HMPREF0179_01587; phage(gi388570752) 2e-12 Click
151899078..1899326 hypothetical protein; HMPREF0179_01588 0.0 Click
16complement(1899429..1899905) hypothetical protein; HMPREF0179_01589 0.0 Click
17complement(1899924..1901258) PHAGE_Entero_EcP1: hypothetical protein; HMPREF0179_01590; phage(gi418489337) 3e-39 Click
18complement(1901263..1902264) PHAGE_Cyanop_S_TIM5: MoxR-like ATPase; HMPREF0179_01591; phage(gi422936311) 2e-61 Click

Region 5, total : 16 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
12181451..2183988 PHAGE_Ectoca_1: EsV-1-65; HMPREF0179_01847; phage(gi13242537) 2e-37 Click
22184135..2184146 attL    AGGGCTCGGCTT 0.0 Click
3complement(2184282..2185610) PHAGE_Mycoba_Wee: gp46; HMPREF0179_01848; phage(gi318065836) 1e-17 Click
4complement(2185665..2186186) lipoyl synthase; HMPREF0179_01849 0.0 Click
5complement(2186535..2188052) PHAGE_Escher_phiKT: tail fiber protein; HMPREF0179_01850; phage(gi422936632) 1e-06 Click
6complement(2188244..2188909) PHAGE_Haemop_Aaphi23: hypothetical protein Aaphi23p49; HMPREF0179_01851; phage(gi31544052) 8e-12 Click
7complement(2188906..2190066) PHAGE_Iodoba_phiPLPE: gp61 putative baseplate protein; HMPREF0179_01852; phage(gi197085675) 2e-42 Click
8complement(2190066..2190419) PHAGE_Haemop_Aaphi23: hypothetical protein Aaphi23p47; HMPREF0179_01853; phage(gi31544050) 3e-13 Click
9complement(2190416..2191147) PHAGE_Haemop_Aaphi23: putative baseplate protein; HMPREF0179_01854; phage(gi31544048) 1e-36 Click
10complement(2191275..2192086) PHAGE_Haemop_Aaphi23: hypothetical protein Aaphi23p45; HMPREF0179_01855; phage(gi31544047) 1e-30 Click
11complement(2192079..2192384) hypothetical protein; HMPREF0179_01856 0.0 Click
12complement(2192428..2192949) PHAGE_Edward_MSW_3: hypothetical protein; HMPREF0179_01857; phage(gi448261053) 1e-10 Click
13complement(2192946..2195690) PHAGE_Geobac_E2: putative tail tape measure protein; HMPREF0179_01858; phage(gi148747742) 3e-21 Click
14complement(2195690..2195842) hypothetical protein; HMPREF0179_01859 0.0 Click
15complement(2195869..2196324) hypothetical protein; HMPREF0179_01860 0.0 Click
16complement(2196279..2196722) PHAGE_Haemop_Aaphi23: hypothetical protein Aaphi23p40; HMPREF0179_01861; phage(gi31544041) 4e-05 Click
17complement(2196739..2198223) PHAGE_Haemop_Aaphi23: hypothetical protein Aaphi23p39; HMPREF0179_01862; phage(gi31544040) 2e-70 Click
182198896..2198907 attR    AGGGCTCGGCTT 0.0 Click

Region 6, total : 47 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
14076605..4076621 attL    GATATCCCGTCCGAACC 0.0 Click
2complement(4076716..4077759) PHAGE_Pelagi_HTVC019P: integrase; HMPREF0179_03418; phage(gi460042383) 2e-31 Click
3complement(4077952..4078929) PHAGE_Bacill_1: Phage associated-antirepressor; HMPREF0179_03419; phage(gi155042960) 9e-25 Click
4complement(4079237..4079608) PHAGE_Cronob_CR3: hypothetical protein; HMPREF0179_03420; phage(gi389060010) 2e-08 Click
5complement(4079611..4079841) hypothetical protein; HMPREF0179_03421 0.0 Click
6complement(4079856..4080425) hypothetical protein; HMPREF0179_03422 0.0 Click
7complement(4080539..4080985) hypothetical protein; HMPREF0179_03423 0.0 Click
8complement(4083681..4085486) PHAGE_Pelagi_HTVC011P: DNA maturase B; HMPREF0179_03424; phage(gi460042368) 1e-166 Click
9complement(4086112..4086399) PHAGE_Pelagi_HTVC011P: DNA maturase A; HMPREF0179_03425; phage(gi460042367) 4e-06 Click
10complement(4086894..4087175) forkhead box protein G1; HMPREF0179_03426 0.0 Click
11complement(4087176..4087418) PHAGE_Aggreg_S1249: hypothetical protein; HMPREF0179_03427; phage(gi273809543) 2e-07 Click
12complement(4087415..4087981) hypothetical protein; HMPREF0179_03428 0.0 Click
13complement(4087994..4089532) PHAGE_Escher_P13374: phage tail fibre; HMPREF0179_03429; phage(gi410491660) 6e-26 Click
14complement(4089541..4090593) PHAGE_Liberi_SC2: collagen triple helix repeat; HMPREF0179_03430; phage(gi423262550) 4e-42 Click
15complement(4090679..4094227) PHAGE_Pelagi_HTVC011P: internal virion protein D; HMPREF0179_03431; phage(gi460042358) 2e-50 Click
16complement(4094224..4096353) hypothetical protein; HMPREF0179_03432 0.0 Click
17complement(4096350..4096949) PHAGE_Pelagi_HTVC011P: hypothetical protein; HMPREF0179_03433; phage(gi460042356) 5e-05 Click
18complement(4096957..4099341) PHAGE_Pelagi_HTVC011P: tail tubular protein B; HMPREF0179_03434; phage(gi460042354) 9e-142 Click
19complement(4099343..4099978) PHAGE_Pelagi_HTVC011P: tail tubular protein A; HMPREF0179_03435; phage(gi460042353) 1e-22 Click
20complement(4100038..4101003) PHAGE_Pelagi_HTVC011P: capsid protein; HMPREF0179_03436; phage(gi460042352) 3e-46 Click
21complement(4101039..4101248) hypothetical protein; HMPREF0179_03437 0.0 Click
22complement(4101329..4101556) hypothetical protein; HMPREF0179_03438 0.0 Click
23complement(4101578..4102174) PHAGE_Azospi_Cd: Phage-related lysozyme; HMPREF0179_03439; phage(gi168495156) 5e-17 Click
24complement(4102104..4102931) PHAGE_Pelagi_HTVC011P: scaffolding protein; HMPREF0179_03440; phage(gi460042348) 7e-24 Click
25complement(4102959..4103132) late cornified envelope-like proline-rich protein 1; HMPREF0179_03441 0.0 Click
26complement(4103157..4104821) PHAGE_Pelagi_HTVC011P: head-to-tail joining protein; HMPREF0179_03442; phage(gi460042347) 5e-103 Click
27complement(4104790..4105035) PHAGE_Synech_Syn5: gp36; HMPREF0179_03443; phage(gi148724479) 8e-06 Click
28complement(4105047..4105607) hypothetical protein; HMPREF0179_03444 0.0 Click
29complement(4105558..4105737) hypothetical protein; HMPREF0179_03445 0.0 Click
30complement(4105692..4106300) PHAGE_Entero_01: Anaerobic NTP reductase, small subunit; HMPREF0179_03446; phage(gi38707878) 1e-09 Click
31complement(4106263..4106481) hypothetical protein; HMPREF0179_03447 0.0 Click
32complement(4106618..4108579) PHAGE_Clostr_st: putative anaerobic ribonucleotide reductase-related protein; HMPREF0179_03448; phage(gi80159762) 4e-44 Click
33complement(4108576..4109070) PHAGE_Mycoba_Faith1: gp76; HMPREF0179_03449; phage(gi338827088) 2e-12 Click
34complement(4109101..4109856) PHAGE_Bacter_8: conserved phage protein pRha; HMPREF0179_03450; phage(gi200003982) 5e-21 Click
35complement(4109887..4110312) PHAGE_Synech_Syn5: gp32; HMPREF0179_03451; phage(gi148724475) 3e-20 Click
36complement(4110293..4110538) PHAGE_Clostr_phiCPV4: hypothetical protein; HMPREF0179_03452; phage(gi392972657) 7e-10 Click
37complement(4110505..4111320) PHAGE_Cyanop_NATL1A_7: exonuclease; HMPREF0179_03453; phage(gi372217790) 2e-38 Click
38complement(4111301..4111888) PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp68; HMPREF0179_03454; phage(gi304360730) 4e-07 Click
39complement(4111866..4112342) PHAGE_Staphy_P954: DNA methyltransferase; HMPREF0179_03455; phage(gi257136381) 7e-39 Click
40complement(4112351..4112755) hypothetical protein; HMPREF0179_03456 0.0 Click
41complement(4113185..4115065) PHAGE_Pelagi_HTVC011P: DNA polymerase family A; HMPREF0179_03457; phage(gi460042339) 5e-145 Click
42complement(4115043..4115852) PHAGE_Vibrio_ICP1: putative antirepressor protein; HMPREF0179_03458; phage(gi325171055) 2e-22 Click
43complement(4115867..4116250) NADH-quinone oxidoreductase subunit I; HMPREF0179_03459 0.0 Click
44complement(4116252..4118048) PHAGE_Vibrio_VP4: Primase/Helicase; HMPREF0179_03460; phage(gi82793115) 1e-119 Click
45complement(4118017..4118526) PHAGE_Synech_Syn5: endonuclease; HMPREF0179_03461; phage(gi148724465) 3e-18 Click
46complement(4118504..4119193) PHAGE_Pseudo_phi15: putative ssDNA-binding protein; HMPREF0179_03462; phage(gi326424975) 1e-13 Click
47complement(4119204..4119467) hypothetical protein; HMPREF0179_03463 0.0 Click
48complement(4119692..4122340) PHAGE_Pelagi_HTVC019P: RNA polymerase; HMPREF0179_03464; phage(gi460042384) 1e-139 Click
494122790..4122806 attR    GATATCCCGTCCGAACC 0.0 Click