Vibrio sp. RC341 , whole genome shotgun sequence. [asmbl_id: NC_000000].4008705, GC%: 46.91%



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            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 43 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
13541682..3541695 attL    CTGCAGAAATCACG 0.0 Click
2complement(3543332..3544810) PHAGE_Escher_TL_2011c: hypothetical protein; VCJ_003163; phage(gi418487119) 2e-08 Click
3complement(3544810..3545070) PHAGE_Escher_TL_2011c: hypothetical protein; VCJ_003164; phage(gi418487118) 9e-10 Click
4complement(3545073..3545450) PHAGE_Escher_TL_2011c: hypothetical protein; VCJ_003165; phage(gi418487117) 4e-15 Click
5complement(3545454..3546104) PHAGE_Stx2_c_I: hypothetical protein Stx2Ip042; VCJ_003166; phage(gi20065838) 3e-36 Click
6complement(3546104..3546445) conserved hypothetical protein; VCJ_003167 0.0 Click
7complement(3546486..3546848) hypothetical protein; VCJ_003168 0.0 Click
8complement(3546853..3548784) PHAGE_Escher_TL_2011c: hypothetical protein; VCJ_003169; phage(gi418487112) 5e-57 Click
9complement(3548829..3550415) PHAGE_Escher_TL_2011c: hypothetical protein; VCJ_003170; phage(gi418487111) 8e-112 Click
10complement(3550509..3553013) hypothetical protein; VCJ_003171 0.0 Click
11complement(3553028..3553657) PHAGE_Escher_TL_2011c: hypothetical protein; VCJ_003172; phage(gi418487106) 1e-23 Click
12complement(3553657..3554256) PHAGE_Escher_TL_2011c: hypothetical protein; VCJ_003173; phage(gi418487105) 7e-09 Click
13complement(3554259..3554723) PHAGE_Escher_TL_2011c: hypothetical protein; VCJ_003174; phage(gi418487104) 4e-33 Click
14complement(3554782..3555162) PHAGE_Escher_TL_2011c: hypothetical protein; VCJ_003175; phage(gi418487103) 9e-16 Click
15complement(3555177..3556382) PHAGE_Escher_TL_2011c: hypothetical protein; VCJ_003176; phage(gi418487102) 4e-136 Click
16complement(3556445..3557449) PHAGE_Stx2_c_86: hypothetical protein Stx2-86_gp15; VCJ_003177; phage(gi116222007) 5e-37 Click
17complement(3557567..3557707) hypothetical protein; VCJ_003178 0.0 Click
18complement(3557839..3558417) F0F1-type ATP synthase beta subunit; VCJ_003179 0.0 Click
19complement(3558420..3558641) hypothetical protein; VCJ_003180 0.0 Click
20complement(3558736..3558879) hypothetical protein; VCJ_003181 0.0 Click
21complement(3558917..3559075) hypothetical protein; VCJ_003182 0.0 Click
22complement(3559085..3559603) PHAGE_Vibrio_CP_T1: hypothetical protein; VCJ_003183; phage(gi418489254) 2e-56 Click
23complement(3559672..3559926) PHAGE_Cronob_ENT47670: phage holin; VCJ_003184; phage(gi431810538) 3e-10 Click
24complement(3560116..3561234) PHAGE_Halovi_HVTV_1: HNH endonuclease; VCJ_003185; phage(gi443404675) 2e-05 Click
25complement(3561231..3561884) hypothetical protein; VCJ_003186 0.0 Click
26complement(3561941..3563185) PHAGE_Bacill_BtCS33: phage tail tape measure protein; VCJ_003187; phage(gi392972722) 7e-07 Click
27complement(3563998..3565254) PHAGE_Salmon_vB_SosS_Oslo: error-prone lesion bypass DNA polymerase V; VCJ_003188; phage(gi399528790) 5e-87 Click
28complement(3565254..3565661) PHAGE_Cronob_ENT39118: protein umuD; VCJ_003189; phage(gi431811072) 1e-20 Click
29complement(3566088..3567014) hypothetical protein; VCJ_003190 0.0 Click
30complement(3567071..3567991) PHAGE_Entero_HK022: IS903 transposase; VCJ_003191; phage(gi9634149) 1e-106 Click
31complement(3568568..3569944) Na+/H+ antiporter NhaA type; VCJ_003192 0.0 Click
32complement(3570066..3570215) hypothetical protein; VCJ_003193 0.0 Click
33complement(3570417..3570629) PHAGE_Lactoc_bIL312: Csp; VCJ_003194; phage(gi13095918) 3e-16 Click
34complement(3570924..3572981) PHAGE_Escher_TL_2011c: putative portal protein; VCJ_003195; phage(gi418487074) 0.0 Click
353573067..3573987 PHAGE_Entero_HK022: IS903 transposase; VCJ_003196; phage(gi9634149) 1e-106 Click
36complement(3574071..3575591) PHAGE_Escher_TL_2011c: putative large subunit terminase; VCJ_003197; phage(gi418487073) 0.0 Click
37complement(3575761..3576606) PHAGE_Escher_TL_2011c: putative terminase small subunit; VCJ_003198; phage(gi418487072) 3e-19 Click
38complement(3576720..3577538) hypothetical protein; VCJ_003199 0.0 Click
39complement(3577602..3578570) PHAGE_Entero_phiP27: hypothetical protein P27p17; VCJ_003200; phage(gi18249881) 1e-12 Click
40complement(3578736..3578900) hypothetical protein; VCJ_003201 0.0 Click
413579458..3580171 PHAGE_Haemop_Aaphi23: putative CI protein; VCJ_003202; phage(gi31544010) 9e-49 Click
423580423..3580686 hypothetical protein; VCJ_003203 0.0 Click
433580559..3580572 attR    CTGCAGAAATCACG 0.0 Click
443580692..3580874 conserved hypothetical protein; VCJ_003204 0.0 Click
453580856..3582079 PHAGE_Gifsy_2: bacteriophage integrase; VCJ_003205; phage(gi169257268) 1e-61 Click

Region 2, total : 12 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
13754212..3755033 PHAGE_Prochl_P_SSM7: phosphate transporter subunit; VCJ_003359; phage(gi326784507) 6e-15 Click
23755112..3756032 phosphate transport system permease protein PstC; VCJ_003360 0.0 Click
33756038..3756901 phosphate transport system permease protein PstA; VCJ_003361 0.0 Click
43756930..3757685 PHAGE_Plankt_PaV_LD: ABC transporter; VCJ_003362; phage(gi371496158) 1e-21 Click
5complement(3757734..3758444) PHAGE_Pseudo_MP1412: diguanylate-cyclase GGDEF domain; VCJ_003363; phage(gi399529005) 6e-08 Click
63758539..3759459 PHAGE_Entero_HK022: IS903 transposase; VCJ_003364; phage(gi9634149) 1e-106 Click
73759572..3760462 PHAGE_Burkho_phi1026b: gp58; VCJ_003365; phage(gi38707948) 3e-09 Click
8complement(3760506..3762818) PHAGE_Lactob_Lj965: putative putative minor tail protein; VCJ_003366; phage(gi41179260) 3e-05 Click
9complement(3763005..3763724) PHAGE_Ostreo_OlV1: hypothetical protein; VCJ_003367; phage(gi313844014) 1e-06 Click
103763871..3764776 PHAGE_Burkho_phi1026b: gp58; VCJ_003368; phage(gi38707948) 6e-09 Click
113764882..3765487 hypothetical protein; VCJ_003369 0.0 Click
12complement(3765552..3766208) PHAGE_Synech_S_SKS1: 3,4-dihydroxy-2-butanone 4-phosphate synthase; VCJ_003370; phage(gi472340887) 2e-38 Click