Rhodobacter sp. SW2 whole genome shotgun sequence. [asmbl_id: NC_000000].3514342, GC%: 65.15%



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            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 11 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
12743820..2743834 attL    GGCCGAGGCGCTGGC 0.0 Click
22748081..2749883 PHAGE_Stenot_S1: putative major head protein; Rsw2DRAFT_2655; phage(gi213163906) 1e-54 Click
32749883..2750092 conserved hypothetical protein; Rsw2DRAFT_2656 0.0 Click
42750095..2750439 PHAGE_Stenot_S1: putative recombinase; Rsw2DRAFT_2657; phage(gi213163907) 3e-07 Click
52750436..2750750 hypothetical protein; Rsw2DRAFT_2658 0.0 Click
6complement(2750764..2750979) PHAGE_Roseob_1: hypothetical protein RDJLphi1_gp12; Rsw2DRAFT_2659; phage(gi331028066) 3e-09 Click
72751787..2752386 conserved hypothetical protein; Rsw2DRAFT_2660 0.0 Click
8complement(2752412..2753704) PROPHAGE_Escher_CFT073: putative prophage integrase; Rsw2DRAFT_2661; phage(gi26250313) 6e-19 Click
92754271..2754516 regulatory protein MerR; Rsw2DRAFT_2662 0.0 Click
102754513..2754776 hypothetical protein; Rsw2DRAFT_2663 0.0 Click
112754773..2755168 PHAGE_Strept_2: hypothetical protein SpyM3_0955; Rsw2DRAFT_2664; phage(gi28876239) 6e-06 Click
122755165..2756172 PHAGE_Entero_Min27: putative replication protein O; Rsw2DRAFT_2665; phage(gi170783638) 3e-05 Click
132756751..2756765 attR    GGCCGAGGCGCTGGC 0.0 Click

Region 2, total : 16 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1complement(3144684..3144908) PHAGE_Cronob_vB_CsaM_GAP32: hypothetical protein; Rsw2DRAFT_3024; phage(gi414087003) 2e-05 Click
23145015..3145956 conserved hypothetical protein; Rsw2DRAFT_3025 0.0 Click
33145953..3146390 hypothetical protein; Rsw2DRAFT_3026 0.0 Click
43146489..3146623 hypothetical protein; Rsw2DRAFT_3027 0.0 Click
5complement(3146628..3146918) conserved hypothetical protein; Rsw2DRAFT_3028 0.0 Click
6complement(3147088..3147405) PilT domain-containing protein; Rsw2DRAFT_3029 0.0 Click
7complement(3147468..3147680) SpoVT/AbrB domain protein; Rsw2DRAFT_3030 0.0 Click
83147751..3150285 PHAGE_phiJL001: tail length tape measure protein; Rsw2DRAFT_3031; phage(gi62327186) 9e-25 Click
93150278..3151423 PHAGE_Pseudo_YuA: structural phage protein; Rsw2DRAFT_3032; phage(gi162135154) 1e-22 Click
103151420..3152280 PHAGE_Pseudo_YuA: structural phage protein; Rsw2DRAFT_3033; phage(gi162135155) 8e-32 Click
113152381..3152629 PHAGE_Pseudo_YuA: structural phage protein; Rsw2DRAFT_3034; phage(gi162135156) 5e-17 Click
123152626..3152997 PHAGE_Burkho_AH2: tail assembly protein; Rsw2DRAFT_3035; phage(gi399529092) 1e-10 Click
133152990..3156316 PHAGE_Pseudo_YuA: structural phage protein; Rsw2DRAFT_3036; phage(gi162135158) 2e-71 Click
143156313..3157308 PHAGE_Roseop_DSS3P2: hypothetical protein DSS3P2_gp37; Rsw2DRAFT_3037; phage(gi237651577) 2e-14 Click
153157305..3157595 conserved hypothetical protein; Rsw2DRAFT_3038 0.0 Click
163157892..3158566 PHAGE_Vibrio_VP93: hypothetical protein VPP93_gp41; Rsw2DRAFT_3039; phage(gi229604965) 1e-11 Click

Region 3, total : 13 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
13189459..3189470 attL    GCAAAAGTTTTC 0.0 Click
23200282..3202060 PHAGE_Stenot_S1: putative terminase large subunit; Rsw2DRAFT_3080; phage(gi213163902) 1e-52 Click
3complement(3202087..3202347) hypothetical protein; Rsw2DRAFT_3081 0.0 Click
4complement(3202344..3202580) PHAGE_Caulob_CcrColossus: putative HTH domain DNA-binding protein; Rsw2DRAFT_3082; phage(gi414088480) 9e-05 Click
53202662..3202943 hypothetical protein; Rsw2DRAFT_3083 0.0 Click
63202946..3203260 hypothetical protein; Rsw2DRAFT_3084 0.0 Click
73203332..3203889 hypothetical protein; Rsw2DRAFT_3085 0.0 Click
83203889..3205217 PHAGE_Stenot_S1: putative portal protein; Rsw2DRAFT_3086; phage(gi213163905) 5e-37 Click
93205214..3206974 PHAGE_Stenot_S1: putative major head protein; Rsw2DRAFT_3087; phage(gi213163906) 6e-57 Click
103206974..3207189 conserved hypothetical protein; Rsw2DRAFT_3088 0.0 Click
113207189..3207431 phage transcriptional regulator, AlpA; Rsw2DRAFT_3089 0.0 Click
123207424..3208500 PHAGE_Azospi_Cd: integrase; Rsw2DRAFT_3090; phage(gi168495175) 2e-22 Click
133208767..3209801 PHAGE_Pseudo_YuA: hypothetical protein; Rsw2DRAFT_3091; phage(gi162135126) 5e-07 Click
14complement(3209920..3209996) tRNA 0.0 Click
15complement(3210074..3211504) PHAGE_Feldma_virus: putative hybrid sensor histdine kinase; Rsw2DRAFT_3092; phage(gi197322490) 5e-07 Click
163219823..3219834 attR    GCAAAAGTTTTC 0.0 Click

Region 4, total : 20 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1complement(3502365..3503207) PROPHAGE_Escher_EDL933: putative transposase; Rsw2DRAFT_3390; phage(gi15801124) 4e-26 Click
2complement(3503216..3503515) PROPHAGE_Ralsto_GMI1000: ISRSO10-transposase ORFA protein; Rsw2DRAFT_3391; phage(gi17546153) 6e-06 Click
33503596..3503919 PHAGE_Burkho_phiE125: ISBt3 transposase subunit protein; Rsw2DRAFT_3392; phage(gi17975200) 4e-34 Click
43503922..3504692 PHAGE_Entero_4795: putative transposase OrfB protein of IS629; Rsw2DRAFT_3393; phage(gi157166067) 7e-80 Click
5complement(3504703..3504840) hypothetical protein; Rsw2DRAFT_3394 0.0 Click
6complement(3504866..3505717) PROPHAGE_Xantho_33913: IS1477 transposase; Rsw2DRAFT_3395; phage(gi77747809) 2e-54 Click
7complement(3505756..3506019) PROPHAGE_Xantho_33913: IS1477 transposase; Rsw2DRAFT_3396; phage(gi21230912) 5e-24 Click
83506086..3507243 PHAGE_Acanth_mimivirus: collagen-like protein 4; Rsw2DRAFT_3397; phage(gi311977616) 2e-10 Click
93507244..3507566 PHAGE_Burkho_phiE125: ISBt3 transposase subunit protein; Rsw2DRAFT_3398; phage(gi17975200) 1e-33 Click
103508050..3508395 PROPHAGE_Escher_CFT073: transposase insF; Rsw2DRAFT_3399; phage(gi26249410) 4e-30 Click
113508736..3508927 1-deoxy-D-xylulose-5-phosphate synthase; Rsw2DRAFT_3400 0.0 Click
12complement(3509314..3510127) PHAGE_Equid__9: envelope glycoprotein J; Rsw2DRAFT_3401; phage(gi216905924) 3e-05 Click
133510232..3510851 PHAGE_Synech_S_SM2: zinc-containing alcohol dehydrogenase superfamily protein; Rsw2DRAFT_3402; phage(gi326781942) 3e-11 Click
14complement(3510852..3511433) PHAGE_Entero_4795: putative transposase OrfB protein of IS629; Rsw2DRAFT_3403; phage(gi157166067) 4e-51 Click
15complement(3511430..3511532) PHAGE_Entero_4795: putative transposase OrfA protein of IS629; Rsw2DRAFT_3404; phage(gi157166066) 5e-06 Click
16complement(3511533..3512143) AMP nucleosidase; Rsw2DRAFT_3405 0.0 Click
17complement(3512198..3512599) Protein-tyrosine phosphatase; Rsw2DRAFT_3406 0.0 Click
183512716..3513273 PROPHAGE_Escher_Sakai: ATP-dependent protease ATP-binding subunit HslU; Rsw2DRAFT_3407; phage(gi15834112) 3e-42 Click
19complement(3513287..3513586) transcriptional regulator, ArsR family; Rsw2DRAFT_3408 0.0 Click
203513828..3514342 PHAGE_Lausan: putative translation elongation factor 1-alpha; Rsw2DRAFT_3409; phage(gi327409596) 2e-18 Click