Thermoanaerobacter ethanolicus CCSD1 whole genome shotgun [asmbl_id: NC_000000].2204850, GC%: 34.24%



Text file for download

            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 11 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
11820930..1820943 attL    TTTTGTTTATAATT 0.0 Click
21829179..1830699 PHAGE_Acidia_1: putative thymidylate synthase; TeCCSD1DRAFT_1954; phage(gi159341089) 2e-08 Click
31830717..1831031 PHAGE_Bacill_BPS13: putative MazG nucleotide pyrophosphohydrolase; TeCCSD1DRAFT_1955; phage(gi410492530) 6e-07 Click
41831110..1831292 conserved hypothetical protein; TeCCSD1DRAFT_1956 0.0 Click
51831308..1831583 Coat F domain protein; TeCCSD1DRAFT_1957 0.0 Click
61831673..1832587 PHAGE_Lactoc_949: putative ribonucleotide diphosphate reductase alpha subunit; TeCCSD1DRAFT_1958; phage(gi327197952) 2e-21 Click
7complement(1832616..1833599) PHAGE_Lactob_LF1: lysin; TeCCSD1DRAFT_1959; phage(gi418489408) 3e-19 Click
81833705..1834385 PHAGE_Geobac_GBSV1: N-acetylmuramoyl-L-alanine amidase; TeCCSD1DRAFT_1960; phage(gi115334645) 1e-16 Click
91834470..1835102 PHAGE_Parame_FR483: hypothetical protein FR483_N177L; TeCCSD1DRAFT_1961; phage(gi155370275) 2e-05 Click
101835164..1835496 PHAGE_Clostr_st: putative IS transposase (OrfA); TeCCSD1DRAFT_1962; phage(gi80159862) 5e-11 Click
111835567..1837003 PHAGE_Thermu_TMA: transposase; TeCCSD1DRAFT_1963; phage(gi343960512) 6e-05 Click
121837149..1838093 PHAGE_Acidia_virus: hypothetical protein ATV_gp66; TeCCSD1DRAFT_1964; phage(gi75750456) 3e-07 Click
131852964..1852977 attR    TTTTGTTTATAATT 0.0 Click

Region 2, total : 15 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
11860917..1860929 attL    TTTAATTTTATTT 0.0 Click
21868453..1868872 PHAGE_Bacill_Fah: holin; TeCCSD1DRAFT_1999; phage(gi89152494) 3e-29 Click
31868869..1869873 PHAGE_Entero_phiFL4A: endolysin; TeCCSD1DRAFT_2000; phage(gi281416489) 1e-09 Click
41869927..1870145 conserved hypothetical protein; TeCCSD1DRAFT_2001 0.0 Click
51870207..1871775 PHAGE_Bacill_Fah: site-specific serine recombinase; TeCCSD1DRAFT_2002; phage(gi89152504) 4e-38 Click
61871739..1872230 PHAGE_Entero_phiFL3A: integrase; TeCCSD1DRAFT_2003; phage(gi281416214) 4e-07 Click
71872193..1872600 PHAGE_Bacill_Fah: site-specific serine recombinase; TeCCSD1DRAFT_2004; phage(gi89152504) 2e-11 Click
81872630..1873760 PHAGE_Geobac_E2: putative recombinase; TeCCSD1DRAFT_2005; phage(gi148747753) 8e-20 Click
91873914..1874060 conserved hypothetical protein; TeCCSD1DRAFT_2006 0.0 Click
101874377..1874751 transcriptional regulator, ArsR family; TeCCSD1DRAFT_2007 0.0 Click
111874765..1877125 PHAGE_Parame_AR158: hypothetical protein AR158_C785L; TeCCSD1DRAFT_2008; phage(gi157953975) 1e-19 Click
121877212..1877676 lipoprotein signal peptidase; TeCCSD1DRAFT_2009 0.0 Click
131877834..1878319 BFD domain protein (2Fe-2S)-binding domain protein; TeCCSD1DRAFT_2010 0.0 Click
141878480..1878668 conserved hypothetical protein; TeCCSD1DRAFT_2011 0.0 Click
151879023..1879355 conserved hypothetical protein; TeCCSD1DRAFT_2012 0.0 Click
161879467..1880669 PHAGE_Rhodot_RM378: hypothetical protein Rm378p022; TeCCSD1DRAFT_2013; phage(gi30044012) 3e-12 Click
171881374..1881386 attR    TTTAATTTTATTT 0.0 Click