Pseudomonas syringae pv. aesculi str. NCPPB3681 [asmbl_id: NC_000000].5836346, GC%: 58.26%



Text file for download

            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 21 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1complement(58084..58593) PHAGE_Burkho_DC1: Rz; PP_00052; phage(gi401723083) 5e-09 Click
2complement(58590..59135) PHAGE_Salmon_PVP_SE1: lysozyme; PP_00053; phage(gi363539668) 4e-52 Click
3complement(59265..59717) PHAGE_Aeromo_phiO18P: putative tail fiber assembly protein; PP_00054; phage(gi148727172) 3e-13 Click
4complement(59783..61642) PHAGE_Ralsto_phiRSA1: tail fiber protein gpH; PP_00055; phage(gi145708097) 2e-38 Click
5complement(61653..62252) PHAGE_Entero_SfV: tail protein; PP_00056; phage(gi19548988) 8e-15 Click
6complement(62240..63280) PHAGE_Entero_SfV: tail protein; PP_00057; phage(gi19549009) 3e-59 Click
7complement(63270..63668) PHAGE_Entero_SfV: tail protein; PP_00058; phage(gi19549008) 3e-23 Click
8complement(63665..64177) PHAGE_Entero_SfV: tail protein; PP_00059; phage(gi19549007) 8e-23 Click
9complement(64174..65301) PHAGE_Entero_SfV: tail protein; PP_00060; phage(gi19549006) 2e-67 Click
10complement(65305..66645) PHAGE_Entero_SfV: tail/DNA circulation protein; PP_00061; phage(gi19549005) 8e-48 Click
11complement(66642..68786) PHAGE_Entero_SfV: tail protein; PP_00062; phage(gi19549004) 2e-38 Click
12complement(68917..69213) PHAGE_Entero_SfV: hypothetical protein SfVp13; PP_00063; phage(gi19549003) 1e-13 Click
13complement(69210..69557) PHAGE_Entero_SfV: hypothetical protein SfVp12; PP_00064; phage(gi19549002) 1e-18 Click
14complement(69618..71114) PHAGE_Entero_SfV: tail sheath protein; PP_00065; phage(gi19549001) 5e-148 Click
15complement(71133..71321) PHAGE_Entero_SfV: hypothetical protein SfVp10; PP_00066; phage(gi19549000) 9e-08 Click
16complement(71318..71908) PHAGE_Entero_SfV: hypothetical protein SfVp09; PP_00067; phage(gi19548999) 5e-20 Click
17complement(71955..72224) prophage PSPPH01 lipoprotein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71737524|ref|YP_272956.1|; PP_00068 2e-40 Click
18complement(72274..72663) PHAGE_Erwini_PEp14: holin; PP_00069; phage(gi374531877) 3e-07 Click
19complement(72786..73958) prophage PSPPH01 cellulase [Pseudomonas syringae pv. phaseolicola 1448A] gi|71733209|ref|YP_272954.1|; PP_00070 0.0 Click
20complement(74428..74871) hypothetical protein Psyr_4602 [Pseudomonas syringae pv. syringae B728a] gi|66047829|ref|YP_237670.1|; PP_00071 3e-77 Click
2175013..75672 PHAGE_Entero_ST64T: C2; PP_00072; phage(gi24371557) 9e-53 Click

Region 2, total : 21 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
15244382..5244394 attL    GGAGACGCTGAAC 0.0 Click
2complement(5257412..5258029) PROPHAGE_Escher_CFT073: prophage P4 integrase; PP_05073; phage(gi26251024) 6e-33 Click
3complement(5258478..5258807) AsnC family transcriptional regulator [Pseudomonas protegens Pf-5] gi|70730048|ref|YP_259787.1|; PP_05074 8e-35 Click
45259537..5259689 LysE family efflux protein [Streptomyces davawensis JCM 4913] gi|471324479|ref|YP_007523509.1|; PP_05075 6e-08 Click
55259940..5260230 hypothetical protein PflA506_1649 [Pseudomonas fluorescens A506] gi|387892859|ref|YP_006323156.1|; PP_05076 5e-30 Click
65260227..5260472 hypothetical protein PSPTO_0014 [Pseudomonas syringae pv. tomato str. DC3000] gi|28867256|ref|NP_789875.1|; PP_05077 5e-14 Click
7complement(5260482..5261630) PROPHAGE_Xylell_Temecula1: phage-related integrase; PP_05078; phage(gi28198969) 5e-75 Click
8complement(5261627..5261839) hypothetical; PP_05079 0.0 Click
9complement(5261920..5262150) hypothetical protein PSPPH_4972 [Pseudomonas syringae pv. phaseolicola 1448A] gi|71735147|ref|YP_277057.1|; PP_05080 3e-21 Click
10complement(5262244..5262540) hypothetical protein PflA506_1608 [Pseudomonas fluorescens A506] gi|387892818|ref|YP_006323115.1|; PP_05081 2e-08 Click
11complement(5262550..5265261) PHAGE_Pseudo_phiCTX: hypothetical protein phiCTXp40; PP_05082; phage(gi17313257) 0.0 Click
12complement(5265261..5265494) PHAGE_Pseudo_phiCTX: hypothetical protein phiCTXp39; PP_05083; phage(gi17313256) 5e-05 Click
13complement(5265571..5265936) hypothetical protein PputUW4_01235 [Pseudomonas sp. UW4] gi|426408148|ref|YP_007028247.1|; PP_05084 7e-07 Click
14complement(5265933..5266433) PHAGE_Pseudo_phiCTX: hypothetical protein phiCTXp36; PP_05085; phage(gi17313253) 1e-47 Click
155266727..5267062 PHAGE_Burkho_phi52237: helix-turn-helix domain protein; PP_05086; phage(gi72537692) 1e-12 Click
165267164..5267340 hypothetical; PP_05087 0.0 Click
17complement(5267382..5267522) hypothetical; PP_05088 0.0 Click
18complement(5267718..5268509) PHAGE_Vibrio_kappa: hypothetical pbsx family phage portal protein; PP_05089; phage(gi165970255) 6e-58 Click
19complement(5268496..5270550) PHAGE_Vibrio_kappa: putative terminase ATPase subunit; PP_05090; phage(gi165970256) 3e-161 Click
205270712..5271644 PHAGE_Vibrio_kappa: putative capsid scaffolding protein; PP_05091; phage(gi165970257) 7e-26 Click
215271646..5272668 PHAGE_Ralsto_phiRSA1: P2 family phage major capsid protein; PP_05092; phage(gi145708082) 7e-75 Click
225272665..5273387 PHAGE_Vibrio_kappa: putative terminase endonuclease subunit; PP_05093; phage(gi165970259) 4e-18 Click
235275114..5275126 attR    GGAGACGCTGAAC 0.0 Click