Leptotrichia hofstadii F0254 .10, whole [asmbl_id: NC_000000].2453253, GC%: 30.79%



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            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 55 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1420499..420511 attL    TTTAGGAGGATAT 0.0 Click
2421402..421414 attL    TTTTATTTTTTTA 0.0 Click
3complement(426972..427313) PHAGE_Lactob_Sha1: phage integrase; GCWU000323_00505; phage(gi418489824) 5e-09 Click
4427329..427341 attR    TTTTATTTTTTTA 0.0 Click
5complement(427331..427453) DNA integration/recombination/invertion protein; GCWU000323_00506 0.0 Click
6complement(427579..427860) PHAGE_Clostr_phiC2: putative integrase; GCWU000323_00507; phage(gi134287379) 3e-05 Click
7complement(427875..428057) toxin-antitoxin system, antitoxin component, MerR family; GCWU000323_00508 0.0 Click
8complement(428051..428248) conserved hypothetical protein; GCWU000323_00509 0.0 Click
9complement(428245..428406) conserved hypothetical protein; GCWU000323_00510 0.0 Click
10complement(428403..428828) PHAGE_Strept_YMC_2011: hypothetical protein; GCWU000323_00511; phage(gi399498710) 1e-09 Click
11complement(428839..429120) hypothetical protein; GCWU000323_00512 0.0 Click
12complement(429127..429270) cytidylate kinase; GCWU000323_00513 0.0 Click
13complement(429279..429791) PHAGE_Lactoc_jm2: hypothetical protein; GCWU000323_00514; phage(gi526244798) 3e-12 Click
14complement(429788..429961) putative enterotoxin type A; GCWU000323_00515 0.0 Click
15complement(429958..430146) 60S ribosomal protein L35; GCWU000323_00516 0.0 Click
16complement(430269..430406) conserved hypothetical protein; GCWU000323_00517 0.0 Click
17complement(430403..430768) conserved hypothetical protein; GCWU000323_00518 0.0 Click
18431046..431459 conserved hypothetical protein; GCWU000323_00519 0.0 Click
19complement(431638..431988) conserved hypothetical protein; GCWU000323_00520 0.0 Click
20complement(431990..432112) conserved hypothetical protein; GCWU000323_00521 0.0 Click
21complement(432125..432544) conserved hypothetical protein; GCWU000323_00522 0.0 Click
22432890..433453 PHAGE_Strept_PH15: putative transcriptional repressor; GCWU000323_00523; phage(gi190151419) 1e-08 Click
23433687..433824 toxin-antitoxin system, antitoxin component, Xre family; GCWU000323_00524 0.0 Click
24433931..434200 putative ATP-dependent nuclease subunit A; GCWU000323_00525 0.0 Click
25434202..434987 hypothetical protein; GCWU000323_00526 0.0 Click
26435263..435598 transcription factor E; GCWU000323_00527 0.0 Click
27complement(435614..435853) conserved hypothetical protein; GCWU000323_00528 0.0 Click
28435991..436248 UvrABC system protein B; GCWU000323_00529 0.0 Click
29complement(436251..436484) ATP-dependent Clp protease adapter protein ClpS; GCWU000323_00530 0.0 Click
30436575..436787 conserved hypothetical protein; GCWU000323_00531 0.0 Click
31436800..436991 DnaJ domain protein; GCWU000323_00532 0.0 Click
32437259..438059 PHAGE_Lactob_c5: putative DNA replication protein; GCWU000323_00533; phage(gi418488187) 6e-14 Click
33438046..438711 PHAGE_Lactob_c5: putative DnaC; GCWU000323_00534; phage(gi418488188) 5e-13 Click
34438804..439337 conserved hypothetical protein; GCWU000323_00535 0.0 Click
35439597..439926 PHAGE_Escher_HK75: RusA-like protein; GCWU000323_00536; phage(gi356870726) 1e-07 Click
36439929..440213 PHAGE_Acanth_moumouvirus: Nucleoside Triphosphate Pyrophosphohydrolase; GCWU000323_00537; phage(gi441432262) 5e-05 Click
37440210..440401 PHAGE_Liston_phiHSIC: hypothetical protein LPPPVgp47; GCWU000323_00538; phage(gi62362398) 6e-10 Click
38440532..440726 PHAGE_Clostr_phiCD38_2: hypothetical protein; GCWU000323_00539; phage(gi333798138) 4e-05 Click
39440843..441130 conserved hypothetical protein; GCWU000323_00540 0.0 Click
40441143..441916 PHAGE_Bacter_B40_8: putative antirepressor; GCWU000323_00541; phage(gi200003978) 2e-59 Click
41441916..442122 conserved hypothetical protein; GCWU000323_00542 0.0 Click
42442286..442468 conserved hypothetical protein; GCWU000323_00543 0.0 Click
43442435..443157 PHAGE_Lister_B054: gp70; GCWU000323_00544; phage(gi157325353) 2e-16 Click
44443154..443438 r-phenyllactate dehydratase, small subunit; GCWU000323_00545 0.0 Click
45443527..443760 cell division protein FtsA; GCWU000323_00546 0.0 Click
46443852..444709 conserved hypothetical protein; GCWU000323_00547 0.0 Click
47444841..445005 putative Holliday junction resolvase; GCWU000323_00548 0.0 Click
48445115..445417 conserved hypothetical protein; GCWU000323_00549 0.0 Click
49445526..446095 transcriptional regulator, MerR family; GCWU000323_00550 0.0 Click
50446070..446528 PHAGE_Synech_S_CBS3: large terminase subunit; GCWU000323_00551; phage(gi331028008) 4e-24 Click
51446576..446890 PHAGE_Vibrio_vB_VpaM_MAR: terminase large subunit; GCWU000323_00552; phage(gi428782726) 4e-12 Click
52446875..447861 PHAGE_Entero_HK630: terminase large subunit A; GCWU000323_00553; phage(gi428782789) 2e-48 Click
53447867..448097 PHAGE_Entero_mEp213: hypothetical protein; GCWU000323_00554; phage(gi428782592) 5e-05 Click
54448116..449669 PHAGE_Provid_Redjac: phage portal protein; GCWU000323_00555; phage(gi410490794) 2e-48 Click
55449629..450411 PHAGE_Paenib_phiIBB_Pl23: Clp protease-like protein; GCWU000323_00556; phage(gi526245014) 3e-41 Click
56450480..450698 charged multivesicular body protein 1b; GCWU000323_00557 0.0 Click
57450699..451034 conserved hypothetical protein; GCWU000323_00558 0.0 Click
58451034..452047 PHAGE_Burkho_BcepNazgul: capsid protein E; GCWU000323_00559; phage(gi34610166) 6e-12 Click
59455871..455883 attR    TTTAGGAGGATAT 0.0 Click

Region 2, total : 25 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1453880..455328 PHAGE_Salmon_SP_004: major tail sheath protein; GCWU000323_00565; phage(gi526003633) 6e-05 Click
2455340..455867 PHAGE_Burkho_phiE202: gp29, phage major tail tube protein; GCWU000323_00566; phage(gi134288759) 2e-05 Click
3455887..456255 hypothetical protein; GCWU000323_00567 0.0 Click
4complement(456454..456705) ABC transporter, permease protein; GCWU000323_00568 0.0 Click
5456718..458520 PHAGE_Entero_phiP27: putative tail protein; GCWU000323_00569; phage(gi18249911) 4e-63 Click
6458706..459728 PHAGE_Paenib_phiIBB_Pl23: tail length tape-measure protein; GCWU000323_00570; phage(gi526245024) 1e-24 Click
7459728..459949 PHAGE_Burkho_phiE255: gp20, phage Tail Protein X; GCWU000323_00571; phage(gi134288808) 2e-05 Click
8459952..460806 PHAGE_Vibrio_vB_VpaM_MAR: putative tail protein; GCWU000323_00572; phage(gi428782753) 2e-09 Click
9460816..461364 PHAGE_Lausan: hypothetical protein; GCWU000323_00573; phage(gi327409912) 7e-05 Click
10461568..461921 toxin-antitoxin system, toxin component, MazF family; GCWU000323_00574 0.0 Click
11462108..462704 hypothetical protein; GCWU000323_00575 0.0 Click
12462682..462954 PHAGE_Clostr_phiCD38_2: hypothetical protein; GCWU000323_00576; phage(gi333798138) 1e-07 Click
13463085..463384 putative sensory transduction histidine kinase; GCWU000323_00577 0.0 Click
14463384..464115 PHAGE_Mycoba_Pukovnik: gp68; GCWU000323_00578; phage(gi192824244) 2e-28 Click
15464150..464644 putative phage baseplate protein; GCWU000323_00579 0.0 Click
16464641..465432 PHAGE_Mythim_'L': hypothetical protein; GCWU000323_00580; phage(gi506497819) 5e-05 Click
17465432..465746 conserved hypothetical protein; GCWU000323_00581 0.0 Click
18465739..466851 PHAGE_Salmon_SP_004: baseplate assembly protein; GCWU000323_00582; phage(gi526003629) 2e-16 Click
19466848..467489 PHAGE_Salmon_SP_004: phage tail protein; GCWU000323_00583; phage(gi526003630) 2e-07 Click
20467499..468476 conserved hypothetical protein; GCWU000323_00584 0.0 Click
21468477..469304 hypothetical protein; GCWU000323_00585 0.0 Click
22469314..469502 conserved hypothetical protein; GCWU000323_00586 0.0 Click
23469515..469991 putative cytoplasmic protein; GCWU000323_00587 0.0 Click
24469994..470146 large-conductance mechanosensitive channel; GCWU000323_00588 0.0 Click
25470148..471137 PHAGE_Acinet_Bphi_B1251: hypothetical protein; GCWU000323_00589; phage(gi423262031) 6e-21 Click