Staphylococcus aureus subsp. aureus Btn1260 .1, whole genome [asmbl_id: NC_000000].2780206, GC%: 32.70%



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            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 18 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1839890..840102 PHAGE_Staphy_55: ORF073; PP_00778; phage(gi66396175) 3e-08 Click
2840399..840605 PHAGE_Staphy_phiMR11: hypothetical protein; PP_00779; phage(gi162290174) 2e-15 Click
3841810..841995 PHAGE_Staphy_55: ORF073; PP_00780; phage(gi66396175) 6e-22 Click
4843064..843480 PHAGE_Staphy_52A: ORF019; PP_00781; phage(gi66396286) 2e-25 Click
5complement(843911..844117) PROPHAGE_Escher_CFT073: transposase/IS protein; PP_00782; phage(gi26248359) 5e-09 Click
6complement(844383..844586) hypothetical protein HMPREF0772_11908 [Staphylococcus aureus subsp. aureus TCH60] gi|384867794|ref|YP_005747990.1|; PP_00783 1e-31 Click
7complement(844602..844733) hypothetical protein SAOV_1320c [Staphylococcus aureus subsp. aureus ED133] gi|384547559|ref|YP_005736812.1|; PP_00784 5e-18 Click
8845001..845252 hypothetical protein HMPREF0772_11907 [Staphylococcus aureus subsp. aureus TCH60] gi|384867793|ref|YP_005747989.1|; PP_00785 3e-41 Click
9845457..845978 PHAGE_Staphy_StB27: minor head protein; PP_00786; phage(gi431809708) 7e-12 Click
10845980..846177 hypothetical protein HMPREF0772_11905 [Staphylococcus aureus subsp. aureus TCH60] gi|384867791|ref|YP_005747987.1|; PP_00787 3e-30 Click
11846337..846921 PHAGE_Staphy_StB27: scaffold protein; PP_00788; phage(gi431809709) 5e-11 Click
12847248..847445 PHAGE_Staphy_StB27: minor head protein; PP_00789; phage(gi431809708) 4e-12 Click
13847495..847608 hypothetical protein SAVC_05795 [Staphylococcus aureus subsp. aureus VC40] gi|379014517|ref|YP_005290753.1|; PP_00790 2e-06 Click
14847590..847763 hypothetical protein SAR1316 [Staphylococcus aureus subsp. aureus MRSA252] gi|49483497|ref|YP_040721.1|; PP_00791 3e-25 Click
15847774..847968 hypothetical protein SAVC_05800 [Staphylococcus aureus subsp. aureus VC40] gi|379014518|ref|YP_005290754.1|; PP_00792 1e-28 Click
16848235..848414 hypothetical protein HMPREF0772_11900 [Staphylococcus aureus subsp. aureus TCH60] gi|384867786|ref|YP_005747982.1|; PP_00793 3e-28 Click
17848725..848973 hypothetical protein SAVC_05775 [Staphylococcus aureus subsp. aureus VC40] gi|379014513|ref|YP_005290749.1|; PP_00794 4e-40 Click
18849124..849402 PHAGE_Staphy_StB27: scaffold protein; PP_00795; phage(gi431809709) 1e-11 Click

Region 2, total : 70 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
11061814..1061825 attL    CACCTATTTATG 0.0 Click
2complement(1061896..1062081) PHAGE_Staphy_phiPVL108: hypothetical protein SABPV108_gp59; PP_00968; phage(gi119443711) 4e-28 Click
3complement(1062317..1063054) PHAGE_Staphy_52A: ORF019; PP_00969; phage(gi66396286) 1e-138 Click
4complement(1063061..1063855) PHAGE_Staphy_52A: ORF013; PP_00970; phage(gi66396280) 1e-150 Click
51064200..1064211 attL    TATTATATCACA 0.0 Click
6complement(1064237..1064992) PHAGE_Staphy_3: amidase; PP_00971; phage(gi156604072) 7e-154 Click
7complement(1065004..1065258) PHAGE_Staphy_3: holin; PP_00972; phage(gi156604071) 3e-43 Click
8complement(1065395..1065694) PHAGE_Staphy_phi7401PVL: hypothetical protein; PP_00973; phage(gi448244681) 2e-52 Click
9complement(1065740..1065904) PHAGE_Staphy_phi2958PVL: hypothetical protein phi2958PVL_gp53; PP_00974; phage(gi209363606) 3e-26 Click
10complement(1065897..1066286) PHAGE_Staphy_phi7401PVL: hypothetical protein; PP_00975; phage(gi448244680) 2e-67 Click
11complement(1066286..1067752) PHAGE_Staphy_phi2958PVL: hypothetical protein phi2958PVL_gp51; PP_00976; phage(gi209363604) 0.0 Click
12complement(1067752..1069662) PHAGE_Staphy_phi2958PVL: hypothetical protein phi2958PVL_gp50; PP_00977; phage(gi209363603) 0.0 Click
13complement(1069678..1069968) PHAGE_Staphy_phi2958PVL: hypothetical protein phi2958PVL_gp49; PP_00978; phage(gi209363602) 7e-51 Click
14complement(1069968..1071551) PHAGE_Staphy_phi2958PVL: hypothetical protein phi2958PVL_gp48; PP_00979; phage(gi209363601) 0.0 Click
15complement(1071560..1072384) PHAGE_Staphy_phi2958PVL: hypothetical protein phi2958PVL_gp47; PP_00980; phage(gi209363600) 7e-160 Click
16complement(1072384..1078614) PHAGE_Staphy_phi2958PVL: tail length tape measure protein; PP_00981; phage(gi209363599) 0.0 Click
17complement(1078628..1078786) PHAGE_Staphy_phi2958PVL: hypothetical protein phi2958PVL_gp45; PP_00982; phage(gi209363598) 5e-24 Click
18complement(1078828..1079178) PHAGE_Staphy_phi2958PVL: hypothetical protein phi2958PVL_gp44; PP_00983; phage(gi209363597) 2e-61 Click
19complement(1079236..1079691) PHAGE_Staphy_phi7401PVL: major tail protein2; PP_00984; phage(gi448244672) 3e-82 Click
20complement(1079783..1080424) PHAGE_Staphy_phi7401PVL: major tail protein1; PP_00985; phage(gi448244671) 1e-122 Click
21complement(1080459..1080854) PHAGE_Staphy_3A: ORF029; PP_00986; phage(gi66395617) 4e-70 Click
22complement(1080908..1081255) PHAGE_Staphy_3A: ORF028; PP_00987; phage(gi66395616) 3e-53 Click
23complement(1081252..1081584) PHAGE_Staphy_phi2958PVL: hypothetical protein phi2958PVL_gp40; PP_00988; phage(gi209363592) 6e-58 Click
24complement(1081596..1081874) PHAGE_Staphy_phi2958PVL: hypothetical protein phi2958PVL_gp39; PP_00989; phage(gi209363591) 2e-48 Click
25complement(1081943..1083106) PHAGE_Staphy_phi7401PVL: phage major capsid protein; PP_00990; phage(gi448244667) 0.0 Click
26complement(1083118..1083891) PHAGE_Staphy_SMSAP5: protease; PP_00991; phage(gi422935811) 2e-142 Click
27complement(1083875..1085113) PHAGE_Staphy_phi7401PVL: portal protein; PP_00992; phage(gi448244665) 0.0 Click
28complement(1085118..1086809) PHAGE_Staphy_phi7401PVL: terminase large subunit; PP_00993; phage(gi448244664) 0.0 Click
29complement(1086799..1087104) PHAGE_Staphy_3A: ORF037; PP_00994; phage(gi66395625) 1e-52 Click
30complement(1087233..1087547) PHAGE_Staphy_phi2958PVL: hypothetical protein phi2958PVL_gp33; PP_00995; phage(gi209363585) 1e-59 Click
31complement(1087704..1088141) PHAGE_Staphy_phi2958PVL: hypothetical protein phi2958PVL_gp32; PP_00996; phage(gi209363584) 2e-78 Click
32complement(1088154..1089512) PHAGE_Staphy_phi7401PVL: helicase; PP_00997; phage(gi448244660) 0.0 Click
33complement(1089502..1089792) PHAGE_Staphy_phi2958PVL: hypothetical protein phi2958PVL_gp30; PP_00998; phage(gi209363582) 3e-52 Click
34complement(1090133..1092580) PHAGE_Staphy_phi2958PVL: virulence-associated protein E; PP_00999; phage(gi209363581) 0.0 Click
35complement(1092868..1093068) PHAGE_Staphy_phi2958PVL: hypothetical protein phi2958PVL_gp28; PP_01000; phage(gi209363580) 4e-30 Click
36complement(1093136..1093288) PHAGE_Staphy_phi2958PVL: hypothetical protein phi2958PVL_gp27; PP_01001; phage(gi209363579) 8e-22 Click
37complement(1093281..1093517) PHAGE_Staphy_phiPV83: hypothetical protein phiPV83p32; PP_01002; phage(gi9635707) 1e-40 Click
38complement(1093542..1093709) PHAGE_Staphy_phiPV83: hypothetical protein phiPV83p31; PP_01003; phage(gi19343454) 5e-21 Click
39complement(1093892..1094428) PHAGE_Staphy_phi2958PVL: hypothetical protein phi2958PVL_gp25; PP_01004; phage(gi209363577) 2e-96 Click
40complement(1094421..1094672) PHAGE_Staphy_phiSLT: phi PVL ORF 52 analogue; PP_01005; phage(gi12719419) 8e-41 Click
41complement(1094684..1094926) PHAGE_Staphy_phiN315: hypothetical protein SA1786; PP_01006; phage(gi30043964) 1e-43 Click
42complement(1094941..1095141) PHAGE_Staphy_12: ETA orf 28-like protein; PP_01007; phage(gi29028633) 6e-33 Click
43complement(1095144..1095401) PHAGE_Staphy_phi2958PVL: hypothetical protein phi2958PVL_gp22; PP_01008; phage(gi209363574) 9e-45 Click
44complement(1095401..1095802) PHAGE_Staphy_phi2958PVL: putative DNA-binding protein; PP_01009; phage(gi209363573) 7e-75 Click
45complement(1095802..1095987) PHAGE_Staphy_phi2958PVL: hypothetical protein phi2958PVL_gp20; PP_01010; phage(gi209363572) 3e-29 Click
46complement(1096000..1097961) PHAGE_Staphy_phi2958PVL: DNA polymerase; PP_01011; phage(gi209363571) 0.0 Click
47complement(1098020..1098577) PHAGE_Staphy_phi2958PVL: hypothetical protein phi2958PVL_gp18; PP_01012; phage(gi209363570) 2e-101 Click
48complement(1098603..1099769) PHAGE_Staphy_phi2958PVL: hypothetical protein phi2958PVL_gp17; PP_01013; phage(gi209363569) 0.0 Click
49complement(1099766..1100128) PHAGE_Staphy_phi7401PVL: hypothetical protein; PP_01014; phage(gi448244652) 2e-60 Click
50complement(1100143..1100466) PHAGE_Staphy_phi2958PVL: hypothetical protein phi2958PVL_gp15; PP_01015; phage(gi209363567) 1e-54 Click
51complement(1100719..1100982) PHAGE_Staphy_2: hypothetical protein SPTP3102_gp15; PP_01016; phage(gi156603964) 5e-48 Click
52complement(1101007..1101222) PHAGE_Staphy_phi2958PVL: hypothetical protein phi2958PVL_gp12; PP_01017; phage(gi209363564) 2e-33 Click
531101277..1101642 PHAGE_Staphy_phi2958PVL: hypothetical protein phi2958PVL_gp11; PP_01018; phage(gi209363563) 5e-64 Click
54complement(1101611..1101856) PHAGE_Staphy_phi2958PVL: hypothetical protein phi2958PVL_gp10; PP_01019; phage(gi209363562) 7e-43 Click
55complement(1101906..1102124) PHAGE_Staphy_phi2958PVL: hypothetical protein phi2958PVL_gp09; PP_01020; phage(gi209363561) 2e-35 Click
56complement(1102140..1102916) PHAGE_Staphy_47: ORF017; PP_01021; phage(gi66395673) 3e-145 Click
57complement(1102942..1103169) PHAGE_Staphy_phi2958PVL: hypothetical protein phi2958PVL_gp07; PP_01022; phage(gi209363559) 9e-37 Click
581103341..1103955 PHAGE_Staphy_phi2958PVL: probable transcriptional repressor; PP_01023; phage(gi209363558) 7e-113 Click
591103971..1104891 PHAGE_Staphy_phi2958PVL: hypothetical protein phi2958PVL_gp05; PP_01024; phage(gi209363557) 3e-177 Click
601104988..1105170 PHAGE_Staphy_phi2958PVL: hypothetical protein phi2958PVL_gp04; PP_01025; phage(gi209363556) 5e-29 Click
611105228..1105353 PHAGE_Staphy_3A: ORF130; PP_01026; phage(gi66395654) 1e-14 Click
62complement(1105350..1105964) PHAGE_Staphy_phi2958PVL: Na(+)/K(+) ATPase; PP_01027; phage(gi209363555) 3e-113 Click
631106090..1107295 PHAGE_Staphy_phi2958PVL: phage integrase; PP_01028; phage(gi209363554) 0.0 Click
64complement(1107338..1109380) PHAGE_Staphy_phi2958PVL: hypothetical protein phi2958PVL_gp01; PP_01029; phage(gi209363553) 5e-58 Click
65complement(1109367..1110239) lipoprotein [Staphylococcus aureus subsp. aureus TCH60] gi|384867537|ref|YP_005747733.1|; PP_01030 1e-165 Click
66complement(1110551..1112245) PHAGE_Feldma_virus: putative hybrid sensor histdine kinase; PP_01031; phage(gi197322490) 2e-16 Click
67complement(1112283..1112951) PHAGE_Ectoca_1: EsV-1-65; PP_01032; phage(gi13242537) 3e-05 Click
681113048..1113059 attR    TATTATATCACA 0.0 Click
69complement(1113141..1113878) ribosomal large subunit pseudouridine synthase B [Staphylococcus aureus subsp. aureus VC40] gi|379014702|ref|YP_005290938.1|; PP_01033 1e-135 Click
70complement(1113871..1114413) segregation and condensation protein B [Staphylococcus aureus subsp. aureus TCH60] gi|384867533|ref|YP_005747729.1|; PP_01034 2e-93 Click
71complement(1114406..1115161) hypothetical protein SAR1571 [Staphylococcus aureus subsp. aureus MRSA252] gi|49483745|ref|YP_040969.1|; PP_01035 4e-140 Click
721115229..1115735 hypothetical protein HMPREF0772_11645 [Staphylococcus aureus subsp. aureus TCH60] gi|384867531|ref|YP_005747727.1|; PP_01036 2e-94 Click
73complement(1115813..1116700) PHAGE_Thermu_45: XerD-like integrase; PP_01037; phage(gi157265299) 5e-22 Click
741119308..1119319 attR    CACCTATTTATG 0.0 Click

Region 3, total : 24 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
11593889..1593904 attL    TTTATTTGTAATTGTT 0.0 Click
2complement(1594448..1594675) PHAGE_Strept_5093: hypothetical protein st5093phage_45; PP_01494; phage(gi238801925) 1e-08 Click
31595094..1595798 toxic shock syndrome toxin-1 [Staphylococcus aureus subsp. aureus N315] gi|15927587|ref|NP_375120.1|; PP_01495 2e-131 Click
4complement(1595953..1596522) PHAGE_Staphy_PT1028: ORF009; PP_01496; phage(gi66395173) 1e-104 Click
5complement(1596519..1596860) PHAGE_Staphy_PT1028: ORF014; PP_01497; phage(gi66395178) 6e-60 Click
6complement(1596863..1597390) PHAGE_Staphy_PT1028: ORF010; PP_01498; phage(gi66395174) 5e-92 Click
7complement(1597441..1597659) Pathogenicity island protein [Staphylococcus aureus subsp. aureus T0131] gi|384868940|ref|YP_005751654.1|; PP_01499 8e-33 Click
8complement(1597677..1598117) pathogenicity island protein [Staphylococcus aureus subsp. aureus TCH60] gi|384868234|ref|YP_005748430.1|; PP_01500 3e-78 Click
9complement(1598267..1598608) PHAGE_Staphy_PT1028: ORF015; PP_01501; phage(gi66395179) 3e-60 Click
10complement(1599144..1599785) PHAGE_Staphy_PT1028: ORF008; PP_01502; phage(gi66395172) 3e-115 Click
11complement(1599782..1600162) PHAGE_Staphy_PT1028: ORF013; PP_01503; phage(gi66395177) 3e-71 Click
12complement(1600474..1600965) PHAGE_Staphy_PT1028: ORF001; PP_01504; phage(gi66395165) 9e-93 Click
13complement(1600953..1601228) PHAGE_Staphy_PT1028: ORF001; PP_01505; phage(gi66395165) 2e-30 Click
14complement(1601242..1602111) PHAGE_Staphy_PT1028: ORF003; PP_01506; phage(gi66395167) 5e-170 Click
15complement(1602175..1602492) PHAGE_Staphy_PT1028: ORF016; PP_01507; phage(gi66395180) 7e-21 Click
16complement(1602493..1602876) hypothetical protein SAA6008_00352 [Staphylococcus aureus subsp. aureus str. JKD6008] gi|384861018|ref|YP_005743738.1|; PP_01508 2e-67 Click
17complement(1603004..1603207) Pathogenicity island protein [Staphylococcus aureus subsp. aureus T0131] gi|384869373|ref|YP_005752087.1|; PP_01509 7e-31 Click
18complement(1603344..1603661) Superantigen-encoding pathogenicity islands protein SaPI [Staphylococcus aureus subsp. aureus T0131] gi|384870574|ref|YP_005753288.1|; PP_01510 2e-53 Click
19complement(1603666..1603884) PHAGE_Mycoba_Pacc40: gp43; PP_01511; phage(gi206600122) 7e-05 Click
201604057..1604731 PHAGE_Lactoc_lato: hypothetical protein P335p08; PP_01512; phage(gi30089869) 2e-10 Click
211604745..1605917 PROPHAGE_Oceano_HTE831: integrase; PP_01513; phage(gi23097608) 1e-43 Click
22complement(1605986..1607602) PHAGE_Halocy_JM_2012: chaperonin GroEL; PP_01514; phage(gi389060206) 8e-67 Click
23complement(1607678..1607962) PHAGE_Bacill_36: GroES; PP_01515; phage(gi156564025) 5e-16 Click
241608137..1608880 abortive infection protein [Staphylococcus aureus subsp. aureus TCH60] gi|384867053|ref|YP_005747249.1|; PP_01516 2e-133 Click
25complement(1608905..1610119) PHAGE_Cafete_BV_PW1: hypothetical protein; PP_01517; phage(gi310831380) 5e-23 Click
261613821..1613836 attR    TTTATTTGTAATTGTT 0.0 Click

Region 4, total : 33 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
12671169..2671180 attL    TTAAGATTGATA 0.0 Click
22671532..2672035 PHAGE_Staphy_StB27: DNA single-strand binding protein; PP_02502; phage(gi431809693) 2e-61 Click
32672087..2672329 30S ribosomal protein S18 [Staphylococcus aureus subsp. aureus VC40] gi|379013681|ref|YP_005289917.1|; PP_02503 2e-39 Click
42672370..2672386 attL    GGGTTGTTTTTGTGTTT 0.0 Click
5complement(2672561..2673280) PHAGE_Staphy_PT1028: ORF005; PP_02504; phage(gi66395169) 4e-34 Click
6complement(2673393..2674607) PHAGE_Staphy_PT1028: ORF002; PP_02505; phage(gi66395166) 0.0 Click
7complement(2674768..2675391) PHAGE_Lactoc_bIL311: repressor; PP_02506; phage(gi13095660) 8e-05 Click
82675540..2675704 DNA-binding protein [Staphylococcus aureus subsp. aureus MRSA252] gi|49482601|ref|YP_039825.1|; PP_02507 3e-22 Click
92675705..2675977 PHAGE_Staphy_PT1028: ORF019; PP_02508; phage(gi66395183) 3e-45 Click
102675989..2676162 hypothetical protein SAT0131_00859 [Staphylococcus aureus subsp. aureus T0131] gi|384869372|ref|YP_005752086.1|; PP_02509 1e-24 Click
112676129..2676332 Pathogenicity island protein [Staphylococcus aureus subsp. aureus T0131] gi|384869373|ref|YP_005752087.1|; PP_02510 2e-31 Click
122676334..2676513 pathogenicity island protein [Staphylococcus aureus subsp. aureus TCH60] gi|384868242|ref|YP_005748438.1|; PP_02511 2e-09 Click
132676515..2676898 Pathogenicity island protein [Staphylococcus aureus subsp. aureus T0131] gi|384869374|ref|YP_005752088.1|; PP_02512 1e-67 Click
142676899..2677225 PHAGE_Staphy_PT1028: ORF016; PP_02513; phage(gi66395180) 7e-58 Click
152677290..2678159 PHAGE_Staphy_PT1028: ORF003; PP_02514; phage(gi66395167) 6e-166 Click
162678173..2678385 PHAGE_Staphy_PT1028: ORF001; PP_02515; phage(gi66395165) 1e-31 Click
172678388..2678978 PHAGE_Staphy_PT1028: ORF001; PP_02516; phage(gi66395165) 1e-92 Click
182679288..2679668 PHAGE_Staphy_PT1028: ORF013; PP_02517; phage(gi66395177) 5e-70 Click
192679665..2680306 PHAGE_Staphy_PT1028: ORF008; PP_02518; phage(gi66395172) 2e-112 Click
202680552..2680686 hypothetical; PP_02519 0.0 Click
212681014..2681358 PHAGE_Staphy_PT1028: ORF015; PP_02520; phage(gi66395179) 5e-54 Click
222681389..2682042 PHAGE_Staphy_PT1028: ORF007; PP_02521; phage(gi66395171) 2e-121 Click
232682095..2682622 PHAGE_Staphy_PT1028: ORF010; PP_02522; phage(gi66395174) 6e-96 Click
242682625..2682966 PHAGE_Staphy_PT1028: ORF014; PP_02523; phage(gi66395178) 3e-61 Click
252682963..2683532 PHAGE_Staphy_PT1028: ORF009; PP_02524; phage(gi66395173) 2e-104 Click
262683809..2684777 PHAGE_Clostr_phiC2: putative abortive infection bacteriophage resistance protein ORF 37; PP_02525; phage(gi134287370) 7e-14 Click
272684955..2685356 PHAGE_Staphy_PT1028: ORF026; PP_02526; phage(gi66395186) 7e-29 Click
282685474..2685986 PHAGE_Staphy_PT1028: ORF011; PP_02527; phage(gi66395175) 5e-92 Click
292686748..2686764 attR    GGGTTGTTTTTGTGTTT 0.0 Click
30complement(2686945..2687952) hypothetical protein HMPREF0772_10126 [Staphylococcus aureus subsp. aureus TCH60] gi|384866012|ref|YP_005746208.1|; PP_02528 0.0 Click
31complement(2688029..2688277) PHAGE_Staphy_PT1028: ORF002; PP_02529; phage(gi66395166) 9e-27 Click
32complement(2688381..2688503) PHAGE_Staphy_PT1028: ORF002; PP_02530; phage(gi66395166) 3e-12 Click
332688909..2689277 hypothetical protein HMPREF0772_10123 [Staphylococcus aureus subsp. aureus TCH60] gi|384866009|ref|YP_005746205.1|; PP_02531 2e-63 Click
342689458..2690030 hypothetical protein HMPREF0772_10122 [Staphylococcus aureus subsp. aureus TCH60] gi|384866008|ref|YP_005746204.1|; PP_02532 1e-103 Click
35complement(2690168..2690431) PHAGE_Staphy_55: ORF044; PP_02533; phage(gi66396156) 4e-06 Click
362690725..2690979 PHAGE_Vibrio_VP882: phage-related tail protein; PP_02534; phage(gi126010872) 9e-05 Click
372691333..2691344 attR    TTAAGATTGATA 0.0 Click