Ralstonia sp. 5_7_47FAA .1, whole genome shotgun sequence. [asmbl_id: NC_000000].5231733, GC%: 63.68%



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            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 44 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1complement(2540663..2544271) PHAGE_Stenot_S1: putative tail protein b; HMPREF1004_02330; phage(gi213163918) 6e-172 Click
2complement(2544271..2544681) PHAGE_Stenot_S1: hypothetical protein StPS1_gp18; HMPREF1004_02331; phage(gi213163917) 2e-07 Click
3complement(2544718..2548755) PHAGE_Pseudo_MP22: putative tail component protein; HMPREF1004_02332; phage(gi157835013) 2e-64 Click
4complement(2548757..2549401) conserved hypothetical protein; HMPREF1004_02333 0.0 Click
5complement(2549376..2549564) conserved hypothetical protein; HMPREF1004_02334 0.0 Click
6complement(2549582..2549992) conserved hypothetical protein; HMPREF1004_02335 0.0 Click
7complement(2549992..2550744) PHAGE_Pseudo_B3: hypothetical protein B3ORF43; HMPREF1004_02336; phage(gi56692612) 4e-41 Click
8complement(2550741..2550962) conserved hypothetical protein; HMPREF1004_02337 0.0 Click
9complement(2550968..2551414) PHAGE_Synech_S_CBS1: hypothetical protein; HMPREF1004_02338; phage(gi356870805) 2e-12 Click
10complement(2551419..2551721) conserved hypothetical protein; HMPREF1004_02339 0.0 Click
11complement(2551721..2552725) PHAGE_Pseudo_KPP10: putative major capsid protein; HMPREF1004_02340; phage(gi327198179) 3e-37 Click
12complement(2552728..2553105) PHAGE_Vibrio_vB_VpaM_MAR: hypothetical protein; HMPREF1004_02341; phage(gi428782730) 3e-10 Click
13complement(2553107..2554348) PHAGE_Klebsi_phiKO2: putative head maturation protease; HMPREF1004_02342; phage(gi46402091) 2e-53 Click
14complement(2554382..2555896) PHAGE_Stenot_S1: putative portal protein; HMPREF1004_02343; phage(gi213163905) 2e-63 Click
15complement(2555898..2556119) conserved hypothetical protein; HMPREF1004_02344 0.0 Click
16complement(2556119..2556511) conserved hypothetical protein; HMPREF1004_02345 0.0 Click
17complement(2556511..2557002) conserved hypothetical protein; HMPREF1004_02346 0.0 Click
18complement(2557032..2558984) PHAGE_Stenot_S1: putative terminase large subunit; HMPREF1004_02347; phage(gi213163902) 4e-80 Click
19complement(2558990..2559535) bacteriophage protein; HMPREF1004_02348 0.0 Click
202559642..2559848 conserved hypothetical protein; HMPREF1004_02349 0.0 Click
212559944..2560465 conserved hypothetical protein; HMPREF1004_02350 0.0 Click
222560563..2560931 PHAGE_Pseudo_MP1412: hypothetical protein; HMPREF1004_02351; phage(gi399528997) 4e-05 Click
23complement(2560895..2562157) PHAGE_Psychr_pOW20_A: DNA methylase; HMPREF1004_02352; phage(gi472339820) 9e-76 Click
24complement(2562154..2563569) PHAGE_Psychr_pOW20_A: DNA methylase; HMPREF1004_02353; phage(gi472339820) 3e-52 Click
252563579..2563591 attL    CCCAAAAGCAAAA 0.0 Click
26complement(2563915..2564331) conserved hypothetical protein; HMPREF1004_02354 0.0 Click
27complement(2564324..2564527) conserved hypothetical protein; HMPREF1004_02355 0.0 Click
28complement(2564529..2565005) holliday junction resolvasome, endonuclease subunit; HMPREF1004_02356 0.0 Click
29complement(2565147..2567447) PHAGE_Bacill_phi105: hypothetical protein phi105_42; HMPREF1004_02357; phage(gi22855035) 7e-82 Click
30complement(2567444..2567689) conserved hypothetical protein; HMPREF1004_02358 0.0 Click
31complement(2567686..2568420) PHAGE_Burkho_BcepGomr: BcepGomrgp43; HMPREF1004_02359; phage(gi146329955) 1e-21 Click
32complement(2568417..2568917) conserved hypothetical protein; HMPREF1004_02360 0.0 Click
33complement(2568914..2569774) PHAGE_Salmon_vB_SosS_Oslo: KilA domain protein; HMPREF1004_02361; phage(gi399528774) 6e-18 Click
34complement(2569780..2570403) conserved hypothetical protein; HMPREF1004_02362 0.0 Click
35complement(2570409..2571257) PHAGE_Salico_CGphi29: hypothetical protein; HMPREF1004_02363; phage(gi472340162) 4e-11 Click
36complement(2571254..2571736) conserved hypothetical protein; HMPREF1004_02364 0.0 Click
37complement(2571748..2572005) conserved hypothetical protein; HMPREF1004_02365 0.0 Click
38complement(2572091..2573029) hypothetical protein; HMPREF1004_02366 0.0 Click
39complement(2573041..2574423) conserved hypothetical protein; HMPREF1004_02367 0.0 Click
40complement(2574566..2575378) toxin-antitoxin system; HMPREF1004_02368 0.0 Click
41complement(2575379..2575657) toxin-antitoxin system, antitoxin component, Xre family; HMPREF1004_02369 0.0 Click
422575817..2576029 conserved hypothetical protein; HMPREF1004_02370 0.0 Click
432576029..2576478 bacteriophage protein; HMPREF1004_02371 0.0 Click
442576475..2577854 PHAGE_Deep_s_D6E: recombinase; HMPREF1004_02372; phage(gi423262352) 1e-40 Click
452577854..2578225 prophage LambdaMc01, site-specific recombinase, resolvase family; HMPREF1004_02373 0.0 Click
462590780..2590792 attR    CCCAAAAGCAAAA 0.0 Click

Region 2, total : 8 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
12846450..2848105 PHAGE_Plankt_PaV_LD: ABC transporter; HMPREF1004_02621; phage(gi371496158) 1e-23 Click
22848347..2848994 PHAGE_Clostr_phiMMP04: cell wall hydrolase; HMPREF1004_02622; phage(gi414090458) 7e-10 Click
3complement(2849049..2849407) PROPHAGE_Escher_CFT073: transposase insF; HMPREF1004_02623; phage(gi26249410) 6e-12 Click
4complement(2849504..2849770) PROPHAGE_Ralsto_GMI1000: isrso12-transposase orfa protein; HMPREF1004_02624; phage(gi17546157) 2e-35 Click
52849884..2850051 HTH-type transcriptional regulator PhcA (Virulence genestranscriptional regulator phcA); HMPREF1004_02625 0.0 Click
6complement(2850124..2850555) ferric uptake regulator; HMPREF1004_02626 0.0 Click
72850708..2851364 lipoprotein, SmpA/OmlA family; HMPREF1004_02627 0.0 Click
82851470..2852261 dihydrodipicolinate reductase; HMPREF1004_02628 0.0 Click
92852436..2855069 PHAGE_Acanth_moumouvirus: isoleucyl-tRNA synthetase; HMPREF1004_02629; phage(gi441432219) 2e-08 Click