Gemella haemolysans M341 .1, whole genome shotgun sequence. [asmbl_id: NC_000000].2034879, GC%: 30.71%



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            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 23 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1complement(1045569..1049519) PHAGE_Lister_LP_030_2: phage capsid and scaffold; HMPREF0428_00970; phage(gi514051949) 1e-46 Click
2complement(1049519..1050244) PHAGE_Strept_pyogenes_315_2: hypothetical protein SpyM3_0931; HMPREF0428_00971; phage(gi28876215) 2e-37 Click
3complement(1050241..1053831) PHAGE_Strept_2972: tail protein; HMPREF0428_00972; phage(gi66391777) 1e-157 Click
4complement(1053855..1054427) PHAGE_Strept_MM1: hypothetical protein MM1p45; HMPREF0428_00973; phage(gi15088785) 4e-33 Click
5complement(1054420..1054791) PHAGE_Strept_5093: unknown; HMPREF0428_00974; phage(gi238801905) 1e-12 Click
6complement(1054809..1055264) PHAGE_Strept_MM1: putative major tail shaft protein; HMPREF0428_00975; phage(gi15088783) 2e-41 Click
7complement(1055257..1055670) PHAGE_Strept_MM1: putative minor capsid protein 4; HMPREF0428_00976; phage(gi15088782) 7e-36 Click
8complement(1055667..1056011) PHAGE_Strept_MM1: putative minor capsid protein 3; HMPREF0428_00977; phage(gi15088781) 9e-22 Click
9complement(1056012..1056353) PHAGE_Strept_MM1: putative minor capsid protein 2; HMPREF0428_00978; phage(gi15088780) 8e-20 Click
10complement(1056343..1056738) PHAGE_Strept_MM1: hypothetical protein MM1p39; HMPREF0428_00979; phage(gi15088779) 2e-24 Click
11complement(1056767..1057003) PHAGE_Lister_B025: gp6; HMPREF0428_00980; phage(gi157325223) 4e-07 Click
12complement(1057019..1057906) PHAGE_Strept_MM1: hypothetical protein MM1p37; HMPREF0428_00981; phage(gi15088777) 4e-86 Click
13complement(1057925..1058494) PHAGE_Strept_MM1: putative scaffolding protein; HMPREF0428_00982; phage(gi15088776) 6e-37 Click
14complement(1058603..1059712) PHAGE_Strept_MM1: hypothetical protein MM1p35; HMPREF0428_00983; phage(gi15088775) 4e-97 Click
15complement(1059696..1061186) PHAGE_Strept_MM1: putative minor capsid protein 1; HMPREF0428_00984; phage(gi26553451) 0.0 Click
16complement(1061197..1062504) PHAGE_Strept_MM1: putative large terminase subunit; HMPREF0428_00985; phage(gi15088772) 0.0 Click
17complement(1062497..1062997) PHAGE_Lactoc_Tuc2009: hypothetical protein Tuc2009_28; HMPREF0428_00986; phage(gi13487829) 4e-32 Click
18complement(1062990..1064000) PHAGE_Strept_MM1: putative DNA methylase; HMPREF0428_00987; phage(gi15088756) 2e-16 Click
19complement(1063993..1064535) PHAGE_Psychr_pOW20_A: DNA methylase; HMPREF0428_00988; phage(gi472339820) 4e-21 Click
20complement(1064721..1065158) hypothetical protein; HMPREF0428_00989 0.0 Click
21complement(1065148..1065273) hypothetical protein; HMPREF0428_00990 0.0 Click
22complement(1065397..1065897) hypothetical protein; HMPREF0428_00991 0.0 Click
23complement(1066121..1066486) PHAGE_Staphy_vB_SepiS_phiIPLA5: YopX family protein; HMPREF0428_00992; phage(gi399528952) 4e-12 Click

Region 2, total : 25 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
11057238..1057249 attL    TAATTCAATGTT 0.0 Click
2complement(1068254..1070134) PHAGE_Lister_P40: gp32; HMPREF0428_00999; phage(gi207270806) 1e-44 Click
3complement(1070118..1071437) PHAGE_Edward_PEi2: hypothetical protein; HMPREF0428_01000; phage(gi509141590) 5e-21 Click
4complement(1071466..1071921) hypothetical protein; HMPREF0428_01001 0.0 Click
5complement(1071927..1073603) PHAGE_Strept_PH15: putative NTP-binding protein; HMPREF0428_01002; phage(gi190151434) 4e-20 Click
6complement(1073593..1073895) hypothetical protein; HMPREF0428_01003 0.0 Click
7complement(1073888..1074181) PHAGE_Thermo_THSA_485A: VRR-NUC domain-containing protein; HMPREF0428_01004; phage(gi397912645) 2e-13 Click
8complement(1074178..1074378) PHAGE_Strept_PH10: hypothetical protein PH10_gp26; HMPREF0428_01005; phage(gi238821343) 5e-09 Click
9complement(1074375..1074692) PHAGE_Lactob_c5: hypothetical protein; HMPREF0428_01006; phage(gi418488176) 6e-05 Click
10complement(1074658..1075623) PHAGE_Strept_P9: helicase; HMPREF0428_01007; phage(gi157311154) 1e-24 Click
11complement(1075865..1075957) hypothetical protein; HMPREF0428_01008 0.0 Click
12complement(1075950..1076210) hypothetical protein; HMPREF0428_01009 0.0 Click
13complement(1076247..1076480) hypothetical protein; HMPREF0428_01010 0.0 Click
14complement(1076508..1077221) PHAGE_Lactoc_bIL285: dUTPase; HMPREF0428_01011; phage(gi13095708) 4e-18 Click
15complement(1077178..1077384) hypothetical protein; HMPREF0428_01012 0.0 Click
16complement(1077377..1077508) hypothetical protein; HMPREF0428_01013 0.0 Click
17complement(1077508..1077714) hypothetical protein; HMPREF0428_01014 0.0 Click
18complement(1077757..1077966) PHAGE_Lactoc_bIL285: repressor; HMPREF0428_01015; phage(gi13095685) 7e-08 Click
191078146..1078883 PHAGE_Lactoc_bIL285: repressor; HMPREF0428_01016; phage(gi13095684) 8e-17 Click
201078631..1078642 attR    TAATTCAATGTT 0.0 Click
211078938..1080326 PHAGE_Staphy_phiMR11: integrase; HMPREF0428_01017; phage(gi162290108) 5e-66 Click
22complement(1080319..1080882) hypothetical protein; HMPREF0428_01018 0.0 Click
23complement(1081055..1081828) PHAGE_Tricho_ni_ascovirus_2c: hypothetical protein TNAV2c_gp071; HMPREF0428_01019; phage(gi116326757) 5e-06 Click
24complement(1081843..1082277) PHAGE_Clostr_phiC2: putative transcriptional regulator; HMPREF0428_01020; phage(gi134287378) 1e-09 Click
25complement(1082384..1083019) hypothetical protein; HMPREF0428_01021 0.0 Click
26complement(1083021..1083227) hypothetical protein; HMPREF0428_01022 0.0 Click
27complement(1083196..1083741) PHAGE_Invert_iridescent_virus_6: 235L; HMPREF0428_01023; phage(gi15078947) 3e-06 Click

Region 3, total : 68 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
11916068..1916079 attL    TTTACTATTTTA 0.0 Click
2complement(1917398..1918615) PHAGE_Megavi_lba: putative HD domain-containing protein; HMPREF0428_01800; phage(gi448825463) 4e-25 Click
3complement(1919704..1920180) PHAGE_Strept_PH15: hypothetical protein phiPH15_gp59; HMPREF0428_01801; phage(gi190151474) 2e-08 Click
4complement(1920586..1921389) PHAGE_Brocho_BL3: gp23; HMPREF0428_01802; phage(gi327409415) 1e-34 Click
5complement(1921391..1921636) hypothetical protein; HMPREF0428_01803 0.0 Click
6complement(1921651..1923627) PHAGE_Strept_EJ_1: hypothetical protein EJ-1p71; HMPREF0428_01804; phage(gi39653745) 2e-68 Click
7complement(1923631..1924011) PHAGE_Strept_pyogenes_315_3: putative holin protein; HMPREF0428_01805; phage(gi28876267) 1e-19 Click
8complement(1924049..1924186) hypothetical protein; HMPREF0428_01806 0.0 Click
9complement(1924161..1924583) PHAGE_Strept_2972: hypothetical protein SPV2972_gp22; HMPREF0428_01807; phage(gi66391781) 6e-09 Click
10complement(1924576..1924779) hypothetical protein; HMPREF0428_01808 0.0 Click
11complement(1924784..1929238) PHAGE_Brocho_BL3: gp19; HMPREF0428_01809; phage(gi327409411) 2e-59 Click
12complement(1929245..1929595) PHAGE_Brocho_BL3: gp18; HMPREF0428_01810; phage(gi327409410) 3e-29 Click
13complement(1929606..1933253) PHAGE_Lactoc_340: putative tail tape measure protein; HMPREF0428_01811; phage(gi526244482) 4e-40 Click
14complement(1933333..1933707) hypothetical protein; HMPREF0428_01812 0.0 Click
15complement(1933716..1934078) PHAGE_Brocho_BL3: gp15; HMPREF0428_01813; phage(gi327409407) 9e-09 Click
16complement(1934105..1934521) PHAGE_Brocho_BL3: gp14.2; HMPREF0428_01814; phage(gi327409405) 6e-14 Click
17complement(1934523..1934894) PHAGE_Bacill_phIS3501: phage protein; HMPREF0428_01815; phage(gi422934335) 7e-06 Click
18complement(1934891..1935409) PHAGE_Brocho_BL3: gp12; HMPREF0428_01816; phage(gi327409402) 1e-11 Click
19complement(1935406..1935723) PHAGE_Brocho_BL3: gp11; HMPREF0428_01817; phage(gi327409401) 6e-07 Click
20complement(1935680..1936009) PHAGE_Brocho_BL3: gp10; HMPREF0428_01818; phage(gi327409400) 3e-10 Click
21complement(1936020..1936214) hypothetical protein; HMPREF0428_01819 0.0 Click
22complement(1936228..1937067) PHAGE_Temper_phiNIH1_1: major capsid protein; HMPREF0428_01820; phage(gi16271809) 3e-79 Click
23complement(1937073..1937645) PHAGE_Strept_pyogenes_315_5: hypothetical protein SpyM3_1323; HMPREF0428_01821; phage(gi28876405) 3e-17 Click
24complement(1937775..1938812) PHAGE_Brocho_BL3: gp7; HMPREF0428_01822; phage(gi327409397) 9e-32 Click
25complement(1938793..1940190) PHAGE_Brocho_BL3: gp4; HMPREF0428_01823; phage(gi327409394) 2e-81 Click
26complement(1940203..1941426) PHAGE_Entero_phiFL1A: terminase large subunit; HMPREF0428_01824; phage(gi281416362) 3e-157 Click
27complement(1941413..1941862) PHAGE_Staphy_StB27: TerS; HMPREF0428_01825; phage(gi431809705) 6e-37 Click
28complement(1942041..1942493) hypothetical protein; HMPREF0428_01826 0.0 Click
29complement(1942599..1942784) hypothetical protein; HMPREF0428_01827 0.0 Click
30complement(1942805..1943461) hypothetical protein; HMPREF0428_01828 0.0 Click
31complement(1943427..1943594) hypothetical protein; HMPREF0428_01829 0.0 Click
32complement(1943699..1944193) hypothetical protein; HMPREF0428_01830 0.0 Click
33complement(1944196..1944624) PHAGE_Staphy_vB_SepiS_phiIPLA5: YopX family protein; HMPREF0428_01831; phage(gi399528952) 6e-06 Click
34complement(1944637..1944828) hypothetical protein; HMPREF0428_01832 0.0 Click
35complement(1944840..1946123) PHAGE_Strept_MM1: putative DNA methylase; HMPREF0428_01833; phage(gi15088756) 1e-127 Click
36complement(1946120..1946326) hypothetical protein; HMPREF0428_01834 0.0 Click
37complement(1946330..1946440) hypothetical protein; HMPREF0428_01835 0.0 Click
38complement(1946591..1946821) hypothetical protein; HMPREF0428_01836 0.0 Click
39complement(1946834..1947118) hypothetical protein; HMPREF0428_01837 0.0 Click
40complement(1947111..1947350) hypothetical protein; HMPREF0428_01838 0.0 Click
41complement(1947350..1947847) hypothetical protein; HMPREF0428_01839 0.0 Click
42complement(1947864..1948322) PHAGE_Entero_phiFL2A: DNA cytosine methyltransferase; HMPREF0428_01840; phage(gi281416514) 5e-56 Click
43complement(1948484..1948723) hypothetical protein; HMPREF0428_01841 0.0 Click
44complement(1948725..1948913) hypothetical protein; HMPREF0428_01842 0.0 Click
45complement(1948917..1949144) hypothetical protein; HMPREF0428_01843 0.0 Click
46complement(1949148..1949330) hypothetical protein; HMPREF0428_01844 0.0 Click
47complement(1949333..1949539) hypothetical protein; HMPREF0428_01845 0.0 Click
48complement(1949520..1949972) PHAGE_Bacill_BCJA1c: rus; HMPREF0428_01846; phage(gi56694892) 1e-23 Click
49complement(1949987..1950961) PHAGE_Staphy_StauST398_3: hypothetical protein; HMPREF0428_01847; phage(gi509140955) 6e-08 Click
50complement(1950968..1951591) PHAGE_Brocho_BL3: gp52; HMPREF0428_01848; phage(gi327409444) 2e-25 Click
51complement(1951581..1952204) hypothetical protein; HMPREF0428_01849 0.0 Click
52complement(1952207..1952629) hypothetical protein; HMPREF0428_01850 0.0 Click
53complement(1952616..1952834) hypothetical protein; HMPREF0428_01851 0.0 Click
54complement(1952932..1953168) hypothetical protein; HMPREF0428_01852 0.0 Click
55complement(1953172..1953507) PHAGE_Lactoc_bIL311: repressor; HMPREF0428_01853; phage(gi13095660) 4e-11 Click
56complement(1953510..1954046) PHAGE_Strept_EJ_1: DNA-binding protein; HMPREF0428_01854; phage(gi39653705) 3e-11 Click
57complement(1954050..1954304) hypothetical protein; HMPREF0428_01855 0.0 Click
58complement(1954279..1954485) hypothetical protein; HMPREF0428_01856 0.0 Click
59complement(1954489..1954767) hypothetical protein; HMPREF0428_01857 0.0 Click
60complement(1954769..1954972) hypothetical protein; HMPREF0428_01858 0.0 Click
61complement(1954969..1955139) hypothetical protein; HMPREF0428_01859 0.0 Click
62complement(1955123..1955281) hypothetical protein; HMPREF0428_01860 0.0 Click
631955377..1955730 hypothetical protein; HMPREF0428_01861 0.0 Click
64complement(1955813..1956022) PHAGE_Staphy_tp310_3: repressor-like protein; HMPREF0428_01862; phage(gi156604021) 5e-17 Click
651956185..1956859 PHAGE_Staphy_77: 77ORF011; HMPREF0428_01863; phage(gi41189526) 1e-28 Click
661956877..1957668 PHAGE_Staphy_PT1028: ORF005; HMPREF0428_01864; phage(gi66395169) 2e-25 Click
671958241..1958252 attR    TTTACTATTTTA 0.0 Click
681958423..1959448 PHAGE_Staphy_phi5967PVL: integrase; HMPREF0428_01865; phage(gi431810245) 5e-31 Click
69complement(1959575..1959823) 30S ribosomal protein S18; HMPREF0428_01866 0.0 Click
70complement(1959847..1960419) PHAGE_Brocho_NF5: gp45; HMPREF0428_01867; phage(gi327197630) 3e-41 Click