Ochrobactrum intermedium LMG 3301 chromosome I VBI00028_1, whole [asmbl_id: NC_000000].4725392, GC%: 57.74%



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            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 53 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1complement(1796867..1798018) PHAGE_Bathyc_BpV1: hypothetical protein; OINT_1001742; phage(gi313768026) 8e-31 Click
2complement(1798152..1799108) oxidoreductase domain-containing protein; OINT_1001743 0.0 Click
31799295..1799368 tRNA 0.0 Click
4complement(1799829..1800194) Hypothetical protein; OINT_1001745 0.0 Click
5complement(1800191..1801111) PHAGE_Burkho_phiE125: DNA adenine methylase; OINT_1001746; phage(gi17975188) 9e-56 Click
6complement(1801130..1801471) PHAGE_Rhodob_RC1: hypothetical protein; OINT_1001747; phage(gi472339691) 5e-20 Click
7complement(1801468..1802451) PHAGE_Entero_2: P2 gpD-like tail protein; OINT_1001748; phage(gi169936019) 3e-37 Click
8complement(1802442..1802702) PHAGE_Burkho_phiE202: gp46, phage Tail Protein X; OINT_1001749; phage(gi134288782) 1e-05 Click
9complement(1802699..1803130) PROPHAGE_Xylell_Temecula1: phage-related tail protein; OINT_1001750; phage(gi28198982) 1e-14 Click
10complement(1803130..1805442) PHAGE_Salmon_ST64B: tail protein; OINT_1001751; phage(gi23505460) 5e-38 Click
11complement(1805503..1805970) Conserved hypothetical protein; OINT_1001752 0.0 Click
12complement(1805983..1806501) Hypothetical protein, conserved; OINT_1001753 0.0 Click
13complement(1806514..1807785) PROPHAGE_Xylell_Temecula1: contractile tail sheath protein; OINT_1001754; phage(gi28198986) 9e-52 Click
14complement(1807957..1808415) PHAGE_Sinorh_PBC5: hypothetical protein PBC5p15; OINT_1001755; phage(gi18071254) 2e-19 Click
15complement(1808420..1809652) PHAGE_Sinorh_PBC5: hypothetical protein PBC5p14; OINT_1001756; phage(gi18071228) 1e-06 Click
16complement(1809654..1810706) PHAGE_Staphy_JD007: adsorption-associated tail protein; OINT_1001757; phage(gi428783003) 5e-10 Click
17complement(1810678..1812972) PHAGE_Staphy_JD007: adsorption-associated tail protein; OINT_1001758; phage(gi428783003) 3e-46 Click
18complement(1812979..1813503) PHAGE_Bacill_SPO1: gp16.1; OINT_1001759; phage(gi209972921) 9e-06 Click
19complement(1813504..1814313) Hypothetical protein; OINT_1001760 0.0 Click
20complement(1814310..1815173) PROPHAGE_Salmon_Ty2: phage baseplate assembly protein; OINT_1001761; phage(gi29143752) 2e-18 Click
21complement(1815170..1815562) PHAGE_Pseudo_phiCTX: predicted baseplate; OINT_1001762; phage(gi17313236) 2e-06 Click
22complement(1815559..1815753) Hypothetical protein; OINT_1001763 0.0 Click
23complement(1815766..1816284) PHAGE_Halomo_1: putative baseplate assembly protein V; OINT_1001764; phage(gi167832354) 3e-08 Click
24complement(1816277..1816801) Hypothetical protein; OINT_1001765 0.0 Click
25complement(1816798..1817277) PHAGE_Rhodob_RcapMu: virion morphogenesis protein; OINT_1001766; phage(gi356870876) 1e-15 Click
26complement(1817274..1817693) PHAGE_Haemop_SuMu: Mu-like prophage protein gp36; OINT_1001767; phage(gi418489087) 3e-10 Click
27complement(1818218..1819183) PHAGE_Pseudo_B3: capsid protein; OINT_1001768; phage(gi56692607) 2e-68 Click
28complement(1819243..1819611) PHAGE_Pseudo_B3: hypothetical protein B3ORF37; OINT_1001769; phage(gi56692606) 2e-10 Click
29complement(1819608..1820705) PHAGE_Rhodob_RC1: I protein; OINT_1001770; phage(gi472339684) 2e-26 Click
30complement(1821021..1822229) PHAGE_Escher_D108: virion morphogenesis; OINT_1001771; phage(gi281199673) 2e-38 Click
31complement(1822233..1823855) PHAGE_Rhodob_RC1: hypothetical protein; OINT_1001772; phage(gi472339690) 8e-90 Click
32complement(1823855..1825504) PROPHAGE_Escher_Sakai: putative portal protein; OINT_1001773; phage(gi15834223) 3e-97 Click
33complement(1825501..1826118) PHAGE_Rhodob_RC1: hypothetical protein; OINT_1001774; phage(gi472339694) 3e-48 Click
34complement(1826121..1826432) PHAGE_Rhodob_RC1: hypothetical protein; OINT_1001775; phage(gi472339695) 2e-25 Click
35complement(1826429..1826806) PHAGE_Rhodob_RC1: hypothetical protein; OINT_1001776; phage(gi472339696) 4e-07 Click
36complement(1826779..1827009) PHAGE_Burkho_KS10: hypothetical protein KS10_gp07; OINT_1001777; phage(gi198449269) 8e-09 Click
37complement(1827006..1827236) Hypothetical protein; OINT_1001778 0.0 Click
38complement(1827211..1827918) exonuclease SbcC; OINT_1001779 0.0 Click
39complement(1827878..1828777) PHAGE_Mycoba_Rosebush: gp46; OINT_1001781; phage(gi29566239) 4e-38 Click
40complement(1828828..1829205) Hypothetical protein, conserved; OINT_1001782 0.0 Click
41complement(1829202..1829426) Hypothetical protein; OINT_1001783 0.0 Click
42complement(1829423..1830073) PHAGE_Rhodob_RC1: hypothetical protein; OINT_1001784; phage(gi472339703) 1e-31 Click
43complement(1830070..1830759) PHAGE_Rhodob_RcapMu: conserved transposable phage protein; OINT_1001785; phage(gi356870864) 2e-39 Click
44complement(1830756..1831049) Hypothetical protein; OINT_1001786 0.0 Click
45complement(1831046..1831669) PHAGE_Burkho_phiE255: gp36; OINT_1001787; phage(gi134288843) 5e-53 Click
46complement(1831695..1831985) Hypothetical protein; OINT_1001788 0.0 Click
47complement(1831982..1832269) Hypothetical protein; OINT_1001789 0.0 Click
48complement(1832266..1833312) PHAGE_Haemop_SuMu: phage transposase; OINT_1001790; phage(gi418489040) 3e-11 Click
49complement(1833338..1835350) PHAGE_Entero_Mu: transposase; OINT_1001791; phage(gi9633496) 2e-97 Click
50complement(1835347..1835811) PHAGE_Rhodob_RcapMu: conserved transposable prophage protein; OINT_1001792; phage(gi356870852) 2e-08 Click
51complement(1835808..1836629) PHAGE_Rhodob_RcapMu: ParB-like nuclease; OINT_1001793; phage(gi356870851) 7e-25 Click
52complement(1836629..1836985) Hypothetical protein; OINT_1001794 0.0 Click
53complement(1836989..1837141) Hypothetical protein; OINT_1001795 0.0 Click
54complement(1837306..1837707) PHAGE_Rhodob_RcapMu: ner-like transcriptional regulator; OINT_1001796; phage(gi356870845) 2e-09 Click

Region 2, total : 20 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
13660834..3660852 attL    ATAAATGTGGTGTTAATGG 0.0 Click
2complement(3669569..3670579) PHAGE_Entero_HK578: tail fiber; OINT_2001058; phage(gi428782882) 1e-06 Click
3complement(3670599..3672137) Hypothetical protein; OINT_2001059 0.0 Click
43672160..3672549 PROPHAGE_Ralsto_GMI1000: ISRSO10-transposase ORFA protein; OINT_2001060; phage(gi17546153) 8e-30 Click
53672546..3673373 PROPHAGE_Escher_CFT073: insertion element IS2 transposase InsD; OINT_2001061; phage(gi26249446) 1e-60 Click
6complement(3673515..3676115) PHAGE_Rhizob_3: putative tail fiber protein H; OINT_2001062; phage(gi195546553) 4e-13 Click
7complement(3676191..3676628) PHAGE_Yersin_PY54: hypothetical protein PY54p19; OINT_2001063; phage(gi33770528) 9e-10 Click
8complement(3676600..3677166) Conserved hypothetical protein; OINT_2001064 0.0 Click
93677246..3677461 Hypothetical protein; OINT_2001065 0.0 Click
10complement(3677468..3678079) Hypothetical protein; OINT_2001066 0.0 Click
11complement(3678079..3680496) PHAGE_Rhizob_3: p017; OINT_2001067; phage(gi195546548) 8e-42 Click
12complement(3681119..3681238) Hypothetical protein; OINT_2001068 0.0 Click
13complement(3681244..3681684) PHAGE_Rhizob_3: p015; OINT_2001069; phage(gi195546546) 3e-14 Click
14complement(3681684..3682145) PHAGE_Rhizob_3: p014; OINT_2001070; phage(gi195546545) 2e-10 Click
15complement(3682209..3682625) PHAGE_Rhizob_3: p012; OINT_2001071; phage(gi195546543) 1e-06 Click
16complement(3683640..3683885) Hypothetical protein; OINT_2001072 0.0 Click
17complement(3684062..3684340) PHAGE_Entero_mEpX2: head-tail connector I; OINT_2001073; phage(gi428765619) 2e-05 Click
18complement(3684324..3684500) Hypothetical protein; OINT_2001074 0.0 Click
19complement(3684552..3685772) PHAGE_Rhizob_3: p005b; OINT_2001075; phage(gi195546535) 1e-22 Click
20complement(3685778..3686653) PHAGE_Entero_mEp235: head maturation protease; OINT_2001076; phage(gi428781814) 4e-57 Click
21complement(3686643..3688082) PHAGE_Azospi_Cd: portal protein; OINT_2001077; phage(gi168495134) 7e-61 Click
223694018..3694036 attR    ATAAATGTGGTGTTAATGG 0.0 Click

Region 3, total : 31 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
14697905..4698330 PHAGE_Sinorh_PBC5: hypothetical protein PBC5p56; OINT_3000013; phage(gi18071280) 2e-14 Click
24698617..4698877 PHAGE_Sinorh_PBC5: hypothetical protein PBC5p55; OINT_3000014; phage(gi18071259) 7e-21 Click
34699076..4699312 Hypothetical protein; OINT_3000015 0.0 Click
44699309..4699914 PHAGE_Pseudo_phi297: terminase small subunit; OINT_3000016; phage(gi374531284) 8e-21 Click
54699918..4701444 PHAGE_Sinorh_PBC5: hypothetical protein PBC5p46; OINT_3000017; phage(gi18071222) 6e-146 Click
64701525..4701956 PHAGE_Sinorh_PBC5: hypothetical protein PBC5p44; OINT_3000018; phage(gi18071256) 3e-29 Click
74701949..4704267 PHAGE_Sinorh_PBC5: hypothetical protein PBC5p43; OINT_3000019; phage(gi18071218) 0.0 Click
84704317..4705306 PHAGE_Sinorh_PBC5: hypothetical protein PBC5p40; OINT_3000020; phage(gi18071233) 8e-34 Click
94705306..4705500 Hypothetical protein; OINT_3000021 0.0 Click
10complement(4705919..4705989) tRNA 0.0 Click
11complement(4706321..4706392) tRNA 0.0 Click
124706655..4706777 Hypothetical protein; OINT_3000024 0.0 Click
134706793..4707941 PHAGE_Sinorh_PBC5: hypothetical protein PBC5p07; OINT_3000025; phage(gi18071229) 8e-140 Click
144708005..4708433 PHAGE_Burkho_BcepIL02: virion-associated phage protein; OINT_3000026; phage(gi238801667) 7e-18 Click
154708533..4709081 PHAGE_Acidia_virus: hypothetical protein ATV_gp61; OINT_3000027; phage(gi75750453) 2e-05 Click
164709095..4709781 PHAGE_Sinorh_PBC5: hypothetical protein PBC5p08; OINT_3000028; phage(gi18071240) 1e-46 Click
174709781..4710413 PHAGE_Sinorh_PBC5: hypothetical protein PBC5p09; OINT_3000029; phage(gi18071246) 2e-23 Click
184710421..4710837 PHAGE_Sinorh_PBC5: hypothetical protein PBC5p10; OINT_3000030; phage(gi18071247) 9e-36 Click
194710837..4711679 PHAGE_Sinorh_PBC5: hypothetical protein PBC5p11; OINT_3000031; phage(gi18071274) 8e-08 Click
204711676..4711957 PHAGE_Sinorh_PBC5: hypothetical protein PBC5p12; OINT_3000032; phage(gi18071294) 2e-22 Click
214711948..4713057 PHAGE_Sinorh_PBC5: hypothetical protein PBC5p14; OINT_3000033; phage(gi18071228) 8e-28 Click
224713033..4713773 Hypothetical protein; OINT_3000034 0.0 Click
234713831..4714655 Hypothetical protein; OINT_3000035 0.0 Click
244714739..4716487 PHAGE_Sinorh_PBC5: hypothetical protein PBC5p17; OINT_3000036; phage(gi18071220) 2e-174 Click
254716484..4716744 PHAGE_Burkho_BcepMigl: virion associated protein; OINT_3000037; phage(gi431809921) 2e-05 Click
264716741..4717154 PHAGE_Persic_P12024L: VRR-NUC domain protein; OINT_3000038; phage(gi399528513) 4e-05 Click
274717151..4717588 PHAGE_Sinorh_PBC5: hypothetical protein PBC5p18; OINT_3000039; phage(gi18071255) 2e-30 Click
284717598..4717864 Hypothetical protein; OINT_3000040 0.0 Click
294717949..4719124 PHAGE_Sinorh_PBC5: hypothetical protein PBC5p19; OINT_3000041; phage(gi18071292) 2e-125 Click
304719121..4720329 PHAGE_Sinorh_PBC5: hypothetical protein PBC5p20; OINT_3000042; phage(gi18071227) 2e-31 Click
314720329..4720622 PHAGE_Tetras_SI1: hypothetical protein; OINT_3000043; phage(gi472342262) 9e-05 Click
324721058..4722080 PHAGE_Sinorh_PBC5: hypothetical protein PBC5p33; OINT_3000044; phage(gi18071215) 2e-42 Click
334722058..4725392 PHAGE_Sinorh_PBC5: hypothetical protein PBC5p33; OINT_3000045; phage(gi18071215) 4e-79 Click