Lactobacillus crispatus 125-2-CHN .1, whole genome shotgun [asmbl_id: NC_000000].2130375, GC%: 36.68%



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            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 68 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1395257..395268 attL    ATTTTAAGAAAG 0.0 Click
2complement(400927..402150) PHAGE_Lactob_Lj771: integrase XerC-like protein; PP_00414; phage(gi163932153) 2e-76 Click
3complement(402326..402871) hypothetical; PP_00415 0.0 Click
4402951..403064 hypothetical; PP_00416 0.0 Click
5403229..403240 attL    GCCTCTTTTCTT 0.0 Click
6complement(403449..403997) hypothetical protein LA2_07865 [Lactobacillus amylovorus GRL 1112] gi|315038719|ref|YP_004032287.1|; PP_00417 2e-07 Click
7complement(404054..405085) PHAGE_Clostr_phiC2: putative abortive infection bacteriophage resistance protein ORF 37; PP_00418; phage(gi134287370) 2e-14 Click
8complement(405232..405861) PHAGE_Lactob_1: Ci-like repressor; PP_00419; phage(gi219563222) 1e-34 Click
9406014..406268 PHAGE_Lactob_Lrm1: cro; PP_00420; phage(gi195661227) 2e-16 Click
10406265..406474 hypothetical protein LPST_C1700 [Lactobacillus plantarum subsp. plantarum ST-III] gi|308180882|ref|YP_003925010.1|; PP_00421 7e-10 Click
11complement(406471..406818) PHAGE_Staphy_phi7401PVL: hypothetical protein; PP_00422; phage(gi448244650) 5e-09 Click
12406916..407047 hypothetical; PP_00423 0.0 Click
13407047..407283 PHAGE_Lactob_phiadh: hypothetical protein phiadhp13; PP_00424; phage(gi9633013) 9e-08 Click
14407414..407542 hypothetical; PP_00425 0.0 Click
15407599..408417 PHAGE_Lactob_1: DnaA; PP_00426; phage(gi219563230) 6e-23 Click
16408706..409029 hypothetical; PP_00427 0.0 Click
17409022..409273 hypothetical protein LA2_05655 [Lactobacillus amylovorus GRL 1112] gi|315038317|ref|YP_004031885.1|; PP_00428 1e-20 Click
18409282..409599 PHAGE_Bacill_phBC6A51: hypothetical protein BC1875; PP_00429; phage(gi31415769) 6e-06 Click
19409857..410342 PHAGE_Entero_phiEf11: conserved hypothetical protein; PP_00430; phage(gi282598755) 9e-07 Click
20410446..410577 hypothetical; PP_00431 0.0 Click
21410577..410891 hypothetical; PP_00432 0.0 Click
22410901..411179 hypothetical; PP_00433 0.0 Click
23411151..411477 hypothetical; PP_00434 0.0 Click
24411515..412015 PHAGE_Lactob_1: hypothetical protein Lv-1_gp37; PP_00435; phage(gi219563234) 1e-06 Click
25412032..412484 PHAGE_Lactob_phiadh: hypothetical protein phiadhp37; PP_00436; phage(gi9633037) 1e-06 Click
26412735..412807 tRNA 0.0 Click
27412859..412929 tRNA 0.0 Click
28412881..413501 PHAGE_Lactob_Nu: putative HNH nuclease; PP_00437; phage(gi78000023) 1e-39 Click
29413665..413865 hypothetical; PP_00438 0.0 Click
30413951..414103 hypothetical; PP_00439 0.0 Click
31414115..414711 PHAGE_Lactob_1: terminase small subunit; PP_00440; phage(gi219563198) 3e-13 Click
32414701..416578 PHAGE_Lactob_phiAT3: putative terminase large subunit; PP_00441; phage(gi48697260) 0.0 Click
33416777..417931 PHAGE_Lactob_1: portal protein; PP_00442; phage(gi219563200) 3e-50 Click
34417918..418628 PHAGE_Lactob_Sha1: protease subunit of ATP-dependent Clp protease; PP_00443; phage(gi418489805) 2e-56 Click
35418612..418797 hypothetical; PP_00444 0.0 Click
36418767..419855 PHAGE_Lactob_Nu: major head protein; PP_00445; phage(gi78000028) 3e-86 Click
37419878..420192 PHAGE_Lactob_phiAT3: hypothetical protein phiAT3gORF7; PP_00446; phage(gi48697265) 2e-14 Click
38420179..420562 hypothetical; PP_00447 0.0 Click
39420565..420966 PHAGE_Strept_YMC_2011: putative tail component protein; PP_00448; phage(gi399498726) 2e-25 Click
40420969..421379 PHAGE_Strept_DT1: putative tail component protein; PP_00449; phage(gi9632428) 6e-05 Click
41421381..422109 PHAGE_Strept_YMC_2011: major tail protein; PP_00450; phage(gi399498728) 3e-17 Click
42422201..422602 hypothetical; PP_00451 0.0 Click
43422659..422835 hypothetical; PP_00452 0.0 Click
44422856..429875 PHAGE_Lactob_1: tape measure protein; PP_00453; phage(gi219563207) 1e-174 Click
45429865..430635 PHAGE_Lactob_1: tail protein; PP_00454; phage(gi219563208) 6e-10 Click
46430635..434363 PHAGE_Lactob_1: fiber tail protein; PP_00455; phage(gi219563209) 2e-73 Click
47434375..434605 hypothetical protein LA2_07610 [Lactobacillus amylovorus GRL 1112] gi|315038668|ref|YP_004032236.1|; PP_00456 8e-06 Click
48434559..436199 PHAGE_Lactob_1: minor capsid protein; PP_00457; phage(gi219563210) 6e-33 Click
49436216..436686 PHAGE_Lactob_AQ113: hypothetical protein; PP_00458; phage(gi446730253) 1e-05 Click
50436687..437034 hypothetical; PP_00459 0.0 Click
51437036..437602 PHAGE_Lactoc_949: putative tail protein; PP_00460; phage(gi327197971) 2e-10 Click
52437651..437941 hypothetical; PP_00461 0.0 Click
53438022..438669 PHAGE_Lactob_1: hypothetical protein Lv-1_gp14; PP_00462; phage(gi219563211) 2e-05 Click
54438669..438830 hypothetical; PP_00463 0.0 Click
55438793..439212 PHAGE_Lactob_phiadh: hypothetical protein phiadhp59; PP_00464; phage(gi9633059) 5e-07 Click
56439341..439475 hypothetical; PP_00465 0.0 Click
57439465..439917 PHAGE_Lactob_H: ORF107; PP_00466; phage(gi148750861) 1e-10 Click
58439907..440809 PHAGE_Lactob_H: muramidase; PP_00467; phage(gi148750862) 5e-88 Click
59complement(441045..441920) hypothetical protein LCRIS_01045 [Lactobacillus crispatus ST1] gi|295692907|ref|YP_003601517.1|; PP_00468 6e-162 Click
60442009..443208 PHAGE_Mycoba_Myrna: gp28; PP_00469; phage(gi203454630) 7e-32 Click
61complement(443245..443910) hemolysin iii [Lactobacillus crispatus ST1] gi|295692909|ref|YP_003601519.1|; PP_00470 1e-124 Click
62444024..444875 degv family protein [Lactobacillus crispatus ST1] gi|295692910|ref|YP_003601520.1|; PP_00471 4e-151 Click
63444878..445108 hypothetical protein LCRIS_01049 [Lactobacillus crispatus ST1] gi|295692911|ref|YP_003601521.1|; PP_00472 1e-37 Click
64445157..445582 hypothetical protein LCRIS_01050 [Lactobacillus crispatus ST1] gi|295692912|ref|YP_003601522.1|; PP_00473 9e-71 Click
65445569..445763 Na+/H+ antiporter [Lactobacillus crispatus ST1] gi|295692913|ref|YP_003601523.1|; PP_00474 2e-24 Click
66445748..446104 Na+/H+ antiporter [Lactobacillus helveticus H10] gi|385813927|ref|YP_005850320.1|; PP_00475 6e-44 Click
67446101..446751 Na+/H+ antiporter [Lactobacillus crispatus ST1] gi|295692913|ref|YP_003601523.1|; PP_00476 5e-100 Click
68446772..447611 GTP-binding protein [Lactobacillus crispatus ST1] gi|295692914|ref|YP_003601524.1|; PP_00477 6e-154 Click
69447608..448360 PHAGE_Emilia_86: putative ribonuclease; PP_00478; phage(gi73852875) 2e-25 Click
70448423..449271 DNA processing protein [Lactobacillus crispatus ST1] gi|295692916|ref|YP_003601526.1|; PP_00479 6e-154 Click
71449341..451452 PHAGE_Cafete_BV_PW1: putative DNA topoisomerase IA; PP_00480; phage(gi310831073) 5e-104 Click
72451475..452791 methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmfo [Lactobacillus crispatus ST1] gi|295692918|ref|YP_003601528.1|; PP_00481 0.0 Click
73452791..453699 PHAGE_Thermu_26: phage XerD-like integrase; PP_00482; phage(gi157265417) 1e-11 Click
74462985..462996 attR    GCCTCTTTTCTT 0.0 Click
75465315..465326 attR    ATTTTAAGAAAG 0.0 Click