Lactobacillus iners DSM 13335 , whole genome shotgun [asmbl_id: NC_000000].1269484, GC%: 32.51%



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            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 10 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1660822..660836 attL    TTTGGCTGTTTGAGG 0.0 Click
2660989..661501 PHAGE_Burkho_KS14: gp6; HMPREF0520_0631; phage(gi327198275) 1e-04 Click
3661562..661960 PHAGE_Bacill_WBeta: putative site-specific recombinase; HMPREF0520_0632; phage(gi85701406) 9e-05 Click
4661950..662594 conserved hypothetical protein; HMPREF0520_0633 0.0 Click
5662753..662766 attL    TGTAGTATTGATGA 0.0 Click
6663250..663573 PHAGE_Nocard_NBR1: terminase large subunit; HMPREF0520_0634; phage(gi372217589) 1e-14 Click
7663712..664755 PHAGE_Strept_2: hypothetical protein SpyM3_0921; HMPREF0520_0635; phage(gi28876205) 2e-08 Click
8664801..664998 PHAGE_Entero_mEp235: portal protein; HMPREF0520_0636; phage(gi428781813) 8e-07 Click
9664982..665284 PHAGE_Entero_mEpX2: portal protein; HMPREF0520_0637; phage(gi428765616) 7e-08 Click
10665332..665343 attL    TTAAAAGGTTTA 0.0 Click
11665753..665950 site-specific recombinase; HMPREF0520_0638 0.0 Click
12665967..666713 conserved hypothetical protein; HMPREF0520_0639 0.0 Click
13666871..666882 attR    TTAAAAGGTTTA 0.0 Click
14666940..667140 phage integrase family site-specific recombinase; HMPREF0520_0640 0.0 Click
15679992..680005 attR    TGTAGTATTGATGA 0.0 Click
16680909..680923 attR    TTTGGCTGTTTGAGG 0.0 Click

Region 2, total : 16 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
11139124..1140017 PHAGE_Cafete_BV_PW1: putative tRNA pseudouridine 5S synthase; HMPREF0520_1100; phage(gi310831060) 4e-08 Click
21140035..1140964 riboflavin biosynthesis protein RibF; HMPREF0520_1101 0.0 Click
31141113..1141295 biotin-acetyl-CoA-carboxylase ligase; HMPREF0520_1102 0.0 Click
41141761..1141949 HicA family toxin-antitoxin system; HMPREF0520_1103 0.0 Click
51141999..1142394 PHAGE_Clostr_CD119: hypothetical protein CDBPCV119_gp44; HMPREF0520_1104; phage(gi90592680) 1e-06 Click
61142409..1142960 PHAGE_Lactob_Lj771: small terminase subunit; HMPREF0520_1105; phage(gi163932180) 2e-66 Click
71142923..1144143 PHAGE_Lactob_Lj771: putative phage terminase large subunit B; HMPREF0520_1106; phage(gi163932181) 3e-156 Click
81144156..1145577 PHAGE_Lactob_Lj928: hypothetical protein Ljo_1438; HMPREF0520_1107; phage(gi41179315) 3e-160 Click
91145561..1146445 PHAGE_Lactob_Lj928: hypothetical protein Ljo_1437; HMPREF0520_1108; phage(gi41179316) 5e-42 Click
101146450..1146572 hypothetical protein; HMPREF0520_1109 0.0 Click
111146632..1147174 conserved hypothetical protein; HMPREF0520_1110 0.0 Click
121147161..1147349 conserved hypothetical protein; HMPREF0520_1111 0.0 Click
131147349..1147564 ISHne1 transposase; HMPREF0520_1112 0.0 Click
141147551..1147919 PHAGE_Lactob_Lj928: putative major head protein; HMPREF0520_1113; phage(gi41179318) 3e-05 Click
151147980..1148285 PHAGE_Strept_SMP: hypothetical protein; HMPREF0520_1114; phage(gi119953780) 6e-10 Click
16complement(1148269..1148430) conserved hypothetical protein; HMPREF0520_1115 0.0 Click
171148869..1149144 prophage protein; HMPREF0520_1116 0.0 Click