Aeromicrobium marinum DSM 15272 , whole genome shotgun [asmbl_id: NC_000000].3078240, GC%: 71.11%



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            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 161 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1complement(57824..58618) PHAGE_Rhodoc_REQ3: hypothetical protein; HMPREF0063_10076; phage(gi372449985) 6e-07 Click
2complement(58615..59274) bacterial DnaA protein helix-turn-helix domain protein; HMPREF0063_10077 0.0 Click
3complement(59271..59930) prevent-host-death family antitoxin; HMPREF0063_10078 0.0 Click
4complement(59927..60064) hypothetical protein; HMPREF0063_10079 0.0 Click
5complement(60061..60306) PHAGE_Mycoba_Spud: gp72; HMPREF0063_10080; phage(gi203460592) 4e-06 Click
6complement(60306..60515) conserved hypothetical protein; HMPREF0063_10081 0.0 Click
7complement(60512..61237) PHAGE_Agroba_7_7_1: hypothetical protein; HMPREF0063_10082; phage(gi435844368) 7e-10 Click
8complement(61234..61506) conserved hypothetical protein; HMPREF0063_10083 0.0 Click
9complement(61503..62249) PHAGE_Rhodoc_REQ2: hypothetical protein; HMPREF0063_10084; phage(gi372449880) 1e-18 Click
10complement(62249..62464) conserved hypothetical protein; HMPREF0063_10085 0.0 Click
11complement(62461..62712) conserved hypothetical protein; HMPREF0063_10086 0.0 Click
12complement(62715..62903) conserved hypothetical protein; HMPREF0063_10087 0.0 Click
13complement(62896..63015) conserved hypothetical protein; HMPREF0063_10088 0.0 Click
14complement(63012..63149) hypothetical protein; HMPREF0063_10089 0.0 Click
15complement(63175..63381) conserved hypothetical protein; HMPREF0063_10090 0.0 Click
16complement(63378..63941) PHAGE_Mycoba_Che9c: gp69; HMPREF0063_10091; phage(gi29566175) 5e-12 Click
17complement(63938..64183) conserved hypothetical protein; HMPREF0063_10092 0.0 Click
18complement(64384..64845) conserved hypothetical protein; HMPREF0063_10093 0.0 Click
1964905..65102 conserved hypothetical protein; HMPREF0063_10094 0.0 Click
20complement(65357..65563) conserved hypothetical protein; HMPREF0063_10095 0.0 Click
21complement(65560..65811) conserved hypothetical protein; HMPREF0063_10096 0.0 Click
2265880..66272 XRE family transcriptional regulator; HMPREF0063_10097 0.0 Click
2366269..66727 conserved hypothetical protein; HMPREF0063_10098 0.0 Click
2466776..67324 hypothetical protein; HMPREF0063_10099 0.0 Click
2567034..67045 attL    GACGCCGCGCTG 0.0 Click
26complement(67321..68598) PHAGE_Mycoba_Che9d: gp50; HMPREF0063_10100; phage(gi29566457) 1e-44 Click
27complement(68832..69452) transcription antitermination factor NusB; HMPREF0063_10101 0.0 Click
28complement(69593..71926) PHAGE_Bacill_SPBc2: hypothetical protein SPBc2p117; HMPREF0063_10102; phage(gi9630242) 2e-18 Click
29complement(71916..72857) PHAGE_Mycoba_Omega: gp206; HMPREF0063_10103; phage(gi29566941) 5e-56 Click
30complement(72885..73757) PHAGE_Tricho_2c: hypothetical protein TNAV2c_gp071; HMPREF0063_10104; phage(gi116326757) 4e-60 Click
31complement(73754..74014) zinc finger CDGSH type superfamily protein; HMPREF0063_10105 0.0 Click
32complement(73999..74955) conserved hypothetical protein; HMPREF0063_10106 0.0 Click
33complement(74942..75601) isochorismatase transposase; HMPREF0063_10107 0.0 Click
34complement(75598..75813) PHAGE_Roseop_EE36P1: hypothetical protein EE36P1_gp41; HMPREF0063_10108; phage(gi237651501) 2e-05 Click
35complement(75848..76117) PHAGE_Mycoba_Qyrzula: gp64; HMPREF0063_10109; phage(gi109521812) 8e-06 Click
36complement(76107..76247) conserved hypothetical protein; HMPREF0063_10110 0.0 Click
3776374..76871 conserved hypothetical protein; HMPREF0063_10111 0.0 Click
3876947..77087 conserved hypothetical protein; HMPREF0063_10112 0.0 Click
3977084..77320 HD phosphohydrolase family protein; HMPREF0063_10113 0.0 Click
4077317..77955 methyltransferase; HMPREF0063_10114 0.0 Click
41complement(78010..78234) conserved hypothetical protein; HMPREF0063_10115 0.0 Click
42complement(78213..78665) cyclase/dehydrase; HMPREF0063_10116 0.0 Click
4378873..80525 Rieske family iron-sulfur cluster-binding protein; HMPREF0063_10117 0.0 Click
44complement(81043..81474) conserved hypothetical protein; HMPREF0063_10118 0.0 Click
4581656..81955 efflux transporter; HMPREF0063_10119 0.0 Click
4681948..82133 integral membrane protein; HMPREF0063_10120 0.0 Click
4782115..82336 hypothetical protein; HMPREF0063_10121 0.0 Click
4882333..82599 50S ribosomal protein L18; HMPREF0063_10122 0.0 Click
4982599..82898 integral membrane protein; HMPREF0063_10123 0.0 Click
50complement(82974..83750) PHAGE_Bacill_BCP78: putative RNA polymerase sigma 28 subunit SigG; HMPREF0063_10124; phage(gi410492878) 2e-15 Click
5184092..84781 conserved hypothetical protein; HMPREF0063_10125 0.0 Click
52complement(84794..85810) PHAGE_Acanth_mimivirus: DNA topoisomerase 1b; HMPREF0063_10126; phage(gi311977570) 3e-28 Click
53complement(85789..86208) conserved hypothetical protein; HMPREF0063_10127 0.0 Click
54complement(86212..86823) NRAMP family metal ion transporter; HMPREF0063_10128 0.0 Click
5586953..87087 conserved hypothetical protein; HMPREF0063_10129 0.0 Click
5687183..87917 ANTAR domain protein; HMPREF0063_10130 0.0 Click
5788366..88716 conserved hypothetical protein; HMPREF0063_10131 0.0 Click
5888716..89576 sigma-70 family RNA polymerase sigma factor; HMPREF0063_10132 0.0 Click
59complement(90048..90908) acyl-CoA thioesterase II; HMPREF0063_10133 0.0 Click
60complement(90905..91735) transmembrane protein; HMPREF0063_10134 0.0 Click
61complement(91775..92668) PHAGE_Tricho_2c: hypothetical protein TNAV2c_gp071; HMPREF0063_10135; phage(gi116326757) 5e-08 Click
62complement(92665..93876) acetyl-CoA acetyltransferase; HMPREF0063_10136 0.0 Click
6393974..95209 acetyl-CoA acetyltransferase; HMPREF0063_10137 0.0 Click
6495243..96760 dioxygenase; HMPREF0063_10138 0.0 Click
6596771..97787 transcriptional regulator family protein; HMPREF0063_10139 0.0 Click
6697784..99343 feruloyl-CoA synthetase; HMPREF0063_10140 0.0 Click
67complement(100133..100417) XRE family transcriptional regulator; HMPREF0063_10141 0.0 Click
68complement(100515..101258) prevent-host-death family antitoxin; HMPREF0063_10142 0.0 Click
69complement(101263..102336) conserved hypothetical protein; HMPREF0063_10143 0.0 Click
70complement(102390..103184) short chain dehydrogenase/reductase family oxidoreductase; HMPREF0063_10144 0.0 Click
71complement(103181..104131) alpha/beta hydrolase; HMPREF0063_10145 0.0 Click
72104225..104761 probable transcriptional regulator; HMPREF0063_10146 0.0 Click
73104806..105210 conserved hypothetical protein; HMPREF0063_10147 0.0 Click
74complement(105317..106390) 5-methylcytosine-specific restriction enzyme subunit McrC; HMPREF0063_10148 0.0 Click
75complement(106387..108600) 5-methylcytosine-specific restriction enzyme B; HMPREF0063_10149 0.0 Click
76108984..110018 conserved hypothetical protein; HMPREF0063_10150 0.0 Click
77110291..112036 PHAGE_Acinet_Bphi_B1251: putative restriction-modification protein; HMPREF0063_10151; phage(gi423261981) 4e-13 Click
78112948..113289 conserved hypothetical protein; HMPREF0063_10152 0.0 Click
79113286..115946 type I restriction-modification system R subunit; HMPREF0063_10153 0.0 Click
80115982..118096 PHAGE_Megavi_lba: putative serine threonine-protein kinase; HMPREF0063_10154; phage(gi448825623) 7e-10 Click
81118467..118754 PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; HMPREF0063_10155; phage(gi24373865) 3e-10 Click
82118802..119626 PROPHAGE_Xantho_33913: ISxac3 transposase; HMPREF0063_10156; phage(gi21231086) 3e-52 Click
83119521..121191 autotransporter; HMPREF0063_10157 0.0 Click
84complement(121349..122944) feruloyl-CoA synthetase; HMPREF0063_10158 0.0 Click
85complement(122965..124020) conserved hypothetical protein; HMPREF0063_10159 0.0 Click
86complement(124017..124748) oxidoreductase; HMPREF0063_10160 0.0 Click
87complement(124784..125341) conserved hypothetical protein; HMPREF0063_10161 0.0 Click
88125525..127261 AMP-dependent synthetase and ligase; HMPREF0063_10162 0.0 Click
89127258..127665 conserved hypothetical protein; HMPREF0063_10163 0.0 Click
90complement(127684..128541) enoyl-CoA hydratase/isomerase; HMPREF0063_10164 0.0 Click
91complement(128566..129528) 2-nitropropane dioxygenase; HMPREF0063_10165 0.0 Click
92complement(129539..130348) enoyl-CoA hydratase; HMPREF0063_10166 0.0 Click
93130613..132325 AMP-dependent synthetase and ligase; HMPREF0063_10167 0.0 Click
94complement(132416..132787) PHAGE_Nile_virus: hypothetical protein; HMPREF0063_10168; phage(gi115531836) 3e-08 Click
95133041..133823 3-hydroxybutyryl-CoA dehydratase; HMPREF0063_10169 0.0 Click
96134160..134447 PHAGE_Pseuda_granulovirus: hypothetical protein PsunGV_gp074; HMPREF0063_10170; phage(gi285002349) 8e-06 Click
97complement(134706..136343) acyl-CoA synthetase; HMPREF0063_10171 0.0 Click
98136429..136653 acetyl-CoA carboxylase, biotin carboxylase; HMPREF0063_10172 0.0 Click
99136650..138203 carboxyl transferase domain protein; HMPREF0063_10173 0.0 Click
100complement(138678..139841) beta-ketoadipyl CoA thiolase; HMPREF0063_10174 0.0 Click
101complement(139998..141566) acyl-CoA synthetase; HMPREF0063_10175 0.0 Click
102complement(141563..141916) conserved hypothetical protein; HMPREF0063_10176 0.0 Click
103complement(141988..143505) dioxygenase; HMPREF0063_10177 0.0 Click
104complement(143605..144843) acetyl-CoA acetyltransferase; HMPREF0063_10178 0.0 Click
105144933..145919 HxlR family transcriptional regulator; HMPREF0063_10179 0.0 Click
106complement(145874..146848) transcriptional regulator family protein; HMPREF0063_10180 0.0 Click
107147097..147855 PHAGE_Plankt_PaV_LD: ABC transporter; HMPREF0063_10181; phage(gi371496158) 1e-14 Click
108147852..148574 PHAGE_Plankt_PaV_LD: ABC transporter; HMPREF0063_10182; phage(gi371496158) 3e-17 Click
109148587..149486 branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein; HMPREF0063_10183 0.0 Click
110149483..150577 branched chain amino acid ABC superfamily ATP binding cassette transporter, membrane protein; HMPREF0063_10184 0.0 Click
111150658..151968 hypothetical protein; HMPREF0063_10185 0.0 Click
112complement(152015..152818) integral membrane protein; HMPREF0063_10186 0.0 Click
113complement(152855..153832) conserved hypothetical protein; HMPREF0063_10187 0.0 Click
114complement(153909..155246) protein of hypothetical function DUF323; HMPREF0063_10188 0.0 Click
115155267..156481 cysteine desulfurase; HMPREF0063_10189 0.0 Click
116complement(156579..157694) PHAGE_Synech_S_MbCM6: ferredoxin; HMPREF0063_10190; phage(gi418487588) 3e-07 Click
117157782..158270 conserved hypothetical protein; HMPREF0063_10191 0.0 Click
118complement(158272..158910) conserved hypothetical protein; HMPREF0063_10192 0.0 Click
119158989..159618 conserved hypothetical protein; HMPREF0063_10193 0.0 Click
120159805..160915 PROPHAGE_Deinoc_R1: serine protease; HMPREF0063_10194; phage(gi15808000) 2e-21 Click
121complement(160916..161117) ISMsm7 transposase; HMPREF0063_10195 0.0 Click
122complement(161599..162228) conserved hypothetical protein; HMPREF0063_10196 0.0 Click
123complement(162332..163975) PHAGE_Acinet_Bphi_B1251: putative restriction-modification protein; HMPREF0063_10197; phage(gi423261981) 3e-08 Click
124complement(164108..165325) PHAGE_Rhodoc_REQ3: phage integrase; HMPREF0063_10198; phage(gi372449972) 8e-21 Click
125complement(165885..166919) PHAGE_Ostreo_2: putative DNA methylase; HMPREF0063_10199; phage(gi314055173) 2e-20 Click
126complement(167246..167602) conserved hypothetical protein; HMPREF0063_10200 0.0 Click
127complement(167587..167955) conserved hypothetical protein; HMPREF0063_10201 0.0 Click
128168127..169431 PHAGE_Acidia_virus: hypothetical protein ATV_gp70; HMPREF0063_10202; phage(gi75750457) 5e-07 Click
129complement(169428..170237) conserved hypothetical protein; HMPREF0063_10203 0.0 Click
130complement(170234..170632) conserved hypothetical protein; HMPREF0063_10204 0.0 Click
131complement(171006..171371) conserved hypothetical protein; HMPREF0063_10205 0.0 Click
132complement(171566..172582) conserved hypothetical protein; HMPREF0063_10206 0.0 Click
133complement(172579..173280) conserved hypothetical protein; HMPREF0063_10207 0.0 Click
134complement(174344..175639) HipA domain protein; HMPREF0063_10208 0.0 Click
135complement(175639..175959) XRE family transcriptional regulator; HMPREF0063_10209 0.0 Click
136complement(176296..177201) conserved hypothetical protein; HMPREF0063_10210 0.0 Click
137complement(177459..178241) PHAGE_Mycoba_LeBron: gp46; HMPREF0063_10211; phage(gi304360992) 4e-29 Click
138complement(178271..178675) conserved hypothetical protein; HMPREF0063_10212 0.0 Click
139complement(178672..179193) hypothetical protein; HMPREF0063_10213 0.0 Click
140complement(179617..180081) transcriptional regulatory protein QseB; HMPREF0063_10214 0.0 Click
141complement(180078..180620) conserved hypothetical protein; HMPREF0063_10215 0.0 Click
142complement(180617..181084) conserved hypothetical protein; HMPREF0063_10216 0.0 Click
143complement(181604..182125) conserved hypothetical protein; HMPREF0063_10217 0.0 Click
144complement(182327..182689) conserved hypothetical protein; HMPREF0063_10218 0.0 Click
145complement(182788..183336) hypothetical protein; HMPREF0063_10219 0.0 Click
146183864..185273 alkane 1-monooxygenase; HMPREF0063_10220 0.0 Click
147185273..185467 probable ferredoxin; HMPREF0063_10221 0.0 Click
148185470..186735 ferredoxin reductase; HMPREF0063_10222 0.0 Click
149complement(186742..188040) conserved hypothetical protein; HMPREF0063_10223 0.0 Click
150complement(188050..189609) long-chain-fatty-acid-CoA ligase; HMPREF0063_10224 0.0 Click
151189910..191745 GMC oxidoreductase; HMPREF0063_10225 0.0 Click
152191745..192611 ABC superfamily ATP binding cassette transporter membrane protein; HMPREF0063_10226 0.0 Click
153192613..193464 ABC superfamily ATP binding cassette transporter membrane protein; HMPREF0063_10227 0.0 Click
154193472..194638 virulence factor Mce family protein; HMPREF0063_10228 0.0 Click
155194635..195693 virulence factor Mce family protein; HMPREF0063_10229 0.0 Click
156195738..196700 virulence factor Mce family protein; HMPREF0063_10230 0.0 Click
157196697..197890 virulence factor Mce family protein; HMPREF0063_10231 0.0 Click
158197315..197326 attR    GACGCCGCGCTG 0.0 Click
159197887..199083 PHAGE_Avian_orthoreovirus: sigma-C protein; HMPREF0063_10232; phage(gi323714226) 1e-04 Click
160199083..200390 virulence factor Mce family protein; HMPREF0063_10233 0.0 Click
161200387..200884 conserved hypothetical protein; HMPREF0063_10234 0.0 Click
162200944..201420 conserved hypothetical protein; HMPREF0063_10235 0.0 Click
163201491..202447 PHAGE_Plankt_PaV_LD: ABC transporter; HMPREF0063_10236; phage(gi371496158) 2e-24 Click

Region 2, total : 20 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1complement(1913691..1915274) PHAGE_Rhodoc_REQ1: hypothetical protein; HMPREF0063_11895; phage(gi372450096) 3e-38 Click
2complement(1915311..1915664) PHAGE_Mycoba_Pacc40: gp21; HMPREF0063_11896; phage(gi206600100) 2e-19 Click
3complement(1915692..1917242) conserved hypothetical protein; HMPREF0063_11897 0.0 Click
4complement(1917256..1917390) hypothetical protein; HMPREF0063_11898 0.0 Click
5complement(1917390..1917617) PHAGE_Lactoc_r1t: Holin; HMPREF0063_11899; phage(gi23455767) 4e-09 Click
6complement(1917614..1918456) PHAGE_Strept_SV1: putative endolysin; HMPREF0063_11900; phage(gi410491741) 3e-17 Click
7complement(1918508..1918789) conserved hypothetical protein; HMPREF0063_11901 0.0 Click
8complement(1918803..1919138) conserved hypothetical protein; HMPREF0063_11902 0.0 Click
9complement(1919165..1920115) PHAGE_Strept_phiHau3: hypothetical protein; HMPREF0063_11903; phage(gi410490979) 6e-10 Click
10complement(1920115..1921281) PHAGE_Microb_Min1: hypothetical protein MPMin1_gp51; HMPREF0063_11904; phage(gi149882832) 1e-08 Click
11complement(1921266..1922333) PHAGE_Strept_SV1: hypothetical protein; HMPREF0063_11905; phage(gi410491738) 1e-10 Click
12complement(1922345..1923208) PHAGE_Strept_SV1: hypothetical protein; HMPREF0063_11906; phage(gi410491737) 3e-07 Click
13complement(1923205..1925961) PHAGE_Bacill_Finn: tape measure protein; HMPREF0063_11907; phage(gi460042199) 5e-35 Click
141925986..1926333 PHAGE_Bacill_SP10: hypothetical protein; HMPREF0063_11908; phage(gi418489545) 4e-07 Click
15complement(1926330..1926644) conserved hypothetical protein; HMPREF0063_11909 0.0 Click
16complement(1926647..1927390) hypothetical protein; HMPREF0063_11910 0.0 Click
17complement(1927478..1927987) conserved hypothetical protein; HMPREF0063_11911 0.0 Click
18complement(1927994..1928236) translation initiation factor IF3; HMPREF0063_11912 0.0 Click
19complement(1928276..1928725) mycobactin biosynthesis peptide synthetase MbtE; HMPREF0063_11913 0.0 Click
20complement(1928727..1929071) PHAGE_Lactoc_Tuc2009: hypothetical protein Tuc2009_41; HMPREF0063_11914; phage(gi13487842) 4e-10 Click