Pseudomonas syringae pv. tabaci ATCC 11528 _1.1, whole [asmbl_id: NC_000000].6068411, GC%: 58.05%



Text file for download

            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 21 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1complement(1536334..1536981) PHAGE_Entero_ST64T: C2; PP_01468; phage(gi24371557) 3e-52 Click
21537135..1537578 hypothetical protein PSPPH_0654 [Pseudomonas syringae pv. phaseolicola 1448A] gi|71734734|ref|YP_272953.1|; PP_01469 2e-77 Click
31538048..1539220 prophage PSPPH01 cellulase [Pseudomonas syringae pv. phaseolicola 1448A] gi|71733209|ref|YP_272954.1|; PP_01470 0.0 Click
41539343..1539732 PHAGE_Erwini_PEp14: holin; PP_01471; phage(gi374531877) 3e-07 Click
51539782..1540051 prophage PSPPH01 lipoprotein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71737524|ref|YP_272956.1|; PP_01472 2e-41 Click
61540098..1540688 PHAGE_Entero_SfV: hypothetical protein SfVp09; PP_01473; phage(gi19548999) 6e-20 Click
71540685..1540873 PHAGE_Entero_SfV: hypothetical protein SfVp10; PP_01474; phage(gi19549000) 3e-08 Click
81540892..1542388 PHAGE_Entero_SfV: tail sheath protein; PP_01475; phage(gi19549001) 8e-148 Click
91542449..1542796 PHAGE_Entero_SfV: hypothetical protein SfVp12; PP_01476; phage(gi19549002) 1e-18 Click
101542793..1543089 PHAGE_Entero_SfV: hypothetical protein SfVp13; PP_01477; phage(gi19549003) 2e-14 Click
111543220..1545364 PHAGE_Entero_SfV: tail protein; PP_01478; phage(gi19549004) 6e-39 Click
121545361..1546746 PHAGE_Entero_SfV: tail/DNA circulation protein; PP_01479; phage(gi19549005) 5e-46 Click
131546750..1547877 PHAGE_Entero_SfV: tail protein; PP_01480; phage(gi19549006) 2e-67 Click
141547874..1548386 PHAGE_Entero_SfV: tail protein; PP_01481; phage(gi19549007) 1e-22 Click
151548383..1548781 PHAGE_Entero_SfV: tail protein; PP_01482; phage(gi19549008) 5e-24 Click
161548771..1549811 PHAGE_Entero_SfV: tail protein; PP_01483; phage(gi19549009) 4e-60 Click
171549799..1550398 PHAGE_Entero_SfV: tail protein; PP_01484; phage(gi19548988) 1e-15 Click
181550409..1551869 PHAGE_Burkho_KS14: gp18; PP_01485; phage(gi327198287) 3e-18 Click
191551877..1552443 PHAGE_Gifsy_1: bacteriophage side tail fiber assembly factor & structural component; Lambda gpTfa homolog; PP_01486; phage(gi169257212) 1e-15 Click
201552785..1553750 tail fiber assembly domain protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28870561|ref|NP_793180.1|; PP_01487 1e-29 Click
211553848..1554894 PHAGE_Cronob_vB_CsaM_GAP31: lysozyme; PP_01488; phage(gi414086784) 1e-46 Click

Region 2, total : 21 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
15201232..5201243 attL    TCTCGACCGGCA 0.0 Click
2complement(5201516..5202412) PHAGE_Thermu_45: XerD-like integrase; PP_05170; phage(gi157265299) 2e-15 Click
3complement(5202515..5202865) 50S ribosomal protein L19 [Pseudomonas syringae pv. tomato str. DC3000] gi|28868683|ref|NP_791302.1|; PP_05171 2e-57 Click
4complement(5202910..5203662) tRNA (guanine-N(1)-)-methyltransferase [Pseudomonas syringae pv. phaseolicola 1448A] gi|71735324|ref|YP_273614.1|; PP_05172 3e-140 Click
5complement(5203668..5204207) 16S rRNA-processing protein RimM [Pseudomonas syringae pv. phaseolicola 1448A] gi|71733889|ref|YP_273613.1|; PP_05173 2e-99 Click
6complement(5204213..5204470) 30S ribosomal protein S16 [Pseudomonas syringae pv. phaseolicola 1448A] gi|71735073|ref|YP_273612.1|; PP_05174 1e-41 Click
7complement(5204718..5205623) signal recognition particle protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71738105|ref|YP_273611.1|; PP_05175 1e-163 Click
8complement(5205620..5206090) Signal recognition particle protein [Pseudomonas syringae pv. syringae B728a] gi|66044529|ref|YP_234370.1|; PP_05176 1e-66 Click
95206144..5207124 cytochrome C assembly family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71733690|ref|YP_273610.1|; PP_05177 9e-139 Click
105207185..5208384 hypothetical protein PSPPH_1351 [Pseudomonas syringae pv. phaseolicola 1448A] gi|71735985|ref|YP_273609.1|; PP_05178 0.0 Click
115208534..5209481 PHAGE_Burkho_phi1026b: gp59; PP_05179; phage(gi38707949) 4e-33 Click
125209502..5209783 citrate-proton symport [Pseudomonas syringae pv. syringae B728a] gi|66044526|ref|YP_234367.1|; PP_05180 2e-44 Click
13complement(5209840..5211021) phosphoribosylglycinamide formyltransferase 2 [Pseudomonas syringae pv. phaseolicola 1448A] gi|71735232|ref|YP_273607.1|; PP_05181 0.0 Click
14complement(5211125..5211592) hypothetical protein PSPPH_1348 [Pseudomonas syringae pv. phaseolicola 1448A] gi|71734512|ref|YP_273606.1|; PP_05182 1e-82 Click
15complement(5211858..5212076) hypothetical protein PSPPH_1347 [Pseudomonas syringae pv. phaseolicola 1448A] gi|71733575|ref|YP_273605.1|; PP_05183 3e-36 Click
16complement(5212076..5212600) PHAGE_Bathyc_BpV1: hypothetical protein; PP_05184; phage(gi313768028) 1e-07 Click
17complement(5212692..5213288) mutT/nudix family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|71737950|ref|YP_273603.1|; PP_05185 9e-111 Click
185213558..5213992 PHAGE_Burkho_Bcep1: gp18; PP_05186; phage(gi38638625) 2e-07 Click
195214056..5214619 hypothetical protein PSPPH_1343 [Pseudomonas syringae pv. phaseolicola 1448A] gi|71736308|ref|YP_273601.1|; PP_05187 3e-107 Click
20complement(5214768..5215079) PHAGE_Megavi_lba: hypothetical protein; PP_05188; phage(gi448826036) 2e-16 Click
21complement(5215085..5218975) PHAGE_Macaci_4: BNRF1; PP_05189; phage(gi51518016) 1e-32 Click
225219255..5220595 PHAGE_Entero_285P: gp16; PP_05190; phage(gi326536141) 2e-08 Click
23complement(5220614..5221123) PHAGE_Mycoba_D29: gp36.1; PP_05191; phage(gi9630421) 7e-08 Click
245222223..5222234 attR    TCTCGACCGGCA 0.0 Click