Vibrio cholerae 12129(1) VCG.Contig178, whole genome shotgun [asmbl_id: NC_000000].1108913, GC%: 47.32%



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            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 11 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
19092..9373 PHAGE_Vibrio_fs1_NC_004306: hypothetical protein fs1p10; VCG_000644; phage(gi23455832) 5e-34 Click
29384..9587 PHAGE_Vibrio_VEJphi_NC_012757: hypothetical protein; VCG_000645; phage(gi238821383) 6e-37 Click
39577..10680 PHAGE_Vibrio_KSF_1phi_NC_006294: putative replication protein; VCG_000646; phage(gi52221122) 0.0 Click
410463..10474 attL    CTCGTAACAAAA 0.0 Click
510685..11023 PHAGE_Vibrio_KSF_1phi_NC_006294: putative ssDNA binding protein; VCG_000647; phage(gi52221123) 2e-35 Click
611297..11506 PHAGE_Vibrio_VCY_phi_NC_016162: hypothetical protein; VCG_000648; phage(gi358356475) 4e-16 Click
711639..13057 PHAGE_Vibrio_KSF_1phi_NC_006294: hypothetical protein KSF-1phigpORFV; VCG_000649; phage(gi52221126) 3e-104 Click
813057..13401 PHAGE_Vibrio_KSF_1phi_NC_006294: hypothetical protein KSF-1phigpORFVIII; VCG_000650; phage(gi52221129) 2e-57 Click
913380..14774 PHAGE_Vibrio_KSF_1phi_NC_006294: Zot-like protein; VCG_000651; phage(gi52221130) 0.0 Click
1015279..15704 hypothetical protein; VCG_000652 0.0 Click
1116488..17231 hypothetical protein; VCG_000653 0.0 Click
12complement(17290..17712) PHAGE_Vibrio_VEJphi_NC_012757: putative regulator protein; VCG_000654; phage(gi238821381) 9e-63 Click
1331287..31298 attR    CTCGTAACAAAA 0.0 Click

Region 2, total : 40 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1700808..700819 attL    AATTTCATTTTT 0.0 Click
2715285..715659 PHAGE_Burkho_phi644_2_NC_009235: gp36, bacteriophage/transposase fusion protein; VCG_001312; phage(gi134288659) 2e-12 Click
3716415..716984 PHAGE_Vibrio_CP_T1_NC_019457: hypothetical protein; VCG_001313; phage(gi418489254) 3e-56 Click
4716994..717152 hypothetical protein; VCG_001314 0.0 Click
5717157..717333 hypothetical protein; VCG_001315 0.0 Click
6717425..717649 hypothetical protein; VCG_001316 0.0 Click
7717652..717999 F0F1-type ATP synthase beta subunit; VCG_001317 0.0 Click
8717989..718231 hypothetical protein; VCG_001318 0.0 Click
9718216..718503 hypothetical protein; VCG_001319 0.0 Click
10718621..719625 PHAGE_Shigel_POCJ13_NC_025434: N/A; VCG_001320; phage(gi725949750) 1e-36 Click
11719687..720892 PHAGE_Escher_TL_2011c_NC_019442: hypothetical protein; VCG_001321; phage(gi418487102) 1e-134 Click
12720907..721287 PHAGE_Escher_TL_2011c_NC_019442: hypothetical protein; VCG_001322; phage(gi418487103) 2e-15 Click
13721342..721809 PHAGE_Escher_TL_2011c_NC_019442: hypothetical protein; VCG_001323; phage(gi418487104) 1e-32 Click
14721806..722411 PHAGE_Escher_TL_2011c_NC_019442: hypothetical protein; VCG_001324; phage(gi418487105) 3e-09 Click
15722411..723040 PHAGE_Escher_TL_2011c_NC_019442: hypothetical protein; VCG_001325; phage(gi418487106) 5e-24 Click
16723040..725559 PHAGE_Shewan_3/49_NC_025466: N/A; VCG_001326; phage(gi712916170) 2e-19 Click
17725631..727238 PHAGE_Escher_TL_2011c_NC_019442: hypothetical protein; VCG_001327; phage(gi418487111) 1e-114 Click
18727238..729214 PHAGE_Escher_TL_2011c_NC_019442: hypothetical protein; VCG_001328; phage(gi418487112) 4e-60 Click
19729201..729581 hypothetical protein; VCG_001329 0.0 Click
20729562..729963 hypothetical protein; VCG_001330 0.0 Click
21729945..730613 PHAGE_Stx2_converting_I_NC_003525: hypothetical protein Stx2Ip042; VCG_001331; phage(gi20065838) 5e-36 Click
22730614..730994 PHAGE_Escher_TL_2011c_NC_019442: hypothetical protein; VCG_001332; phage(gi418487117) 1e-14 Click
23730997..731257 PHAGE_Escher_TL_2011c_NC_019442: hypothetical protein; VCG_001333; phage(gi418487118) 2e-09 Click
24731257..732732 PHAGE_Escher_TL_2011c_NC_019442: hypothetical protein; VCG_001334; phage(gi418487119) 1e-07 Click
25complement(732865..734895) PHAGE_Lactoc_Q54_NC_008364: putative ribonuclease; VCG_001335; phage(gi115304286) 3e-62 Click
26complement(735388..735600) PHAGE_Lactoc_bIL312_NC_002671: Csp; VCG_001336; phage(gi13095918) 7e-15 Click
27complement(735890..736000) hypothetical protein; VCG_001337 0.0 Click
28complement(736227..738827) PHAGE_Archae_BJ1_virus_NC_008695: hypothetical protein BJ1_gp66; VCG_001338; phage(gi119757051) 1e-05 Click
29739095..739235 helicase Snf2 family; VCG_001339 0.0 Click
30739898..740194 methyl-accepting chemotaxis protein; VCG_001340 0.0 Click
31complement(740157..740672) PROPHAGE_Xantho_33913: IS1480 transposase; VCG_001341; phage(gi21231089) 4e-08 Click
32complement(740669..740959) PROPHAGE_Brucel_1330: ISBm1, transposase orfA; VCG_001342; phage(gi23501424) 2e-07 Click
33741180..751286 PHAGE_Erwini_PEp14_NC_016767: putative DNA methylase; VCG_001343; phage(gi374531875) 0.0 Click
34751274..753901 PHAGE_Vibrio_12A4_NC_021068: hypothetical protein; VCG_001345; phage(gi481019131) 0.0 Click
35754565..754732 L-threonine 3-dehydrogenase; VCG_001346 0.0 Click
36complement(755829..756890) PHAGE_Sulfol_virus_STSV1_NC_006268: hypothetical protein STSV1pORF37; VCG_001347; phage(gi51980163) 2e-06 Click
37complement(756941..758050) PHAGE_Entero_IME_EF4_NC_023551: tail tape measure protein; VCG_001348; phage(gi589893031) 2e-06 Click
38complement(758063..759127) hypothetical protein; VCG_001349 0.0 Click
39complement(759139..759534) hypothetical protein; VCG_001350 0.0 Click
40complement(759559..759939) hypothetical protein; VCG_001351 0.0 Click
41760190..760201 attR    AATTTCATTTTT 0.0 Click
42complement(760568..760822) PHAGE_Gifsy_2_NC_010393: bacteriophage integrase; VCG_001352; phage(gi169257268) 3e-11 Click

Region 3, total : 50 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1complement(939049..939486) PHAGE_Aeromo_phiO18P_NC_009542: putative cI repressor; VCG_001502; phage(gi148727133) 1e-23 Click
2939967..940191 PHAGE_Vibrio_12B12_NC_021070: DNA-binding protein Ner; VCG_001503; phage(gi481019194) 1e-14 Click
3940239..942203 PHAGE_Vibrio_12B12_NC_021070: transposase; VCG_001504; phage(gi481019193) 0.0 Click
4942230..943174 PHAGE_Vibrio_12B12_NC_021070: DNA transposition protein; VCG_001505; phage(gi481019192) 4e-131 Click
5943182..943406 hypothetical protein; VCG_001506 0.0 Click
6943413..943658 hypothetical protein; VCG_001507 0.0 Click
7943630..943986 PHAGE_Vibrio_12B12_NC_021070: hypothetical protein; VCG_001508; phage(gi481019191) 3e-06 Click
8943996..944370 PHAGE_Vibrio_12B12_NC_021070: hypothetical protein; VCG_001509; phage(gi481019190) 5e-29 Click
9944435..944533 hypothetical protein; VCG_001510 0.0 Click
10944520..945134 PHAGE_Vibrio_12B12_NC_021070: hypothetical protein; VCG_001511; phage(gi481019189) 2e-88 Click
11945144..945416 PHAGE_Vibrio_12B12_NC_021070: hypothetical protein; VCG_001512; phage(gi481019188) 7e-22 Click
12945409..945651 PHAGE_Vibrio_12B12_NC_021070: hypothetical protein; VCG_001513; phage(gi481019186) 1e-21 Click
13945635..945832 PHAGE_Vibrio_12B12_NC_021070: hypothetical protein; VCG_001514; phage(gi481019185) 2e-10 Click
14945829..946299 PHAGE_Vibrio_12B12_NC_021070: hypothetical protein; VCG_001515; phage(gi481019184) 2e-47 Click
15946296..946565 PHAGE_Entero_phiEf11_NC_013696: asch domain protein; VCG_001516; phage(gi282598726) 1e-14 Click
16946562..947092 PHAGE_Haemop_SuMu_NC_019455: hypothetical protein; VCG_001517; phage(gi418489048) 1e-30 Click
17947172..947405 PHAGE_Vibrio_12B12_NC_021070: hypothetical protein; VCG_001518; phage(gi481019182) 1e-32 Click
18947698..948243 PHAGE_Vibrio_12B12_NC_021070: hypothetical protein; VCG_001519; phage(gi481019180) 5e-57 Click
19948706..949200 PHAGE_Vibrio_12B12_NC_021070: hypothetical protein; VCG_001520; phage(gi481019179) 1e-28 Click
20949285..949842 PHAGE_Pelagi_HTVC008M_NC_020484: hypothetical protein; VCG_001521; phage(gi460042628) 4e-17 Click
21949827..950129 PHAGE_Vibrio_12B12_NC_021070: hypothetical protein; VCG_001522; phage(gi481019176) 8e-18 Click
22950105..950704 PHAGE_Vibrio_12B12_NC_021070: hypothetical protein; VCG_001523; phage(gi481019175) 2e-50 Click
23950928..951230 PHAGE_Vibrio_12B12_NC_021070: hypothetical protein; VCG_001524; phage(gi481019173) 1e-33 Click
24951239..951529 PHAGE_Vibrio_12B12_NC_021070: hypothetical protein; VCG_001525; phage(gi481019172) 8e-42 Click
25951541..952107 PHAGE_Vibrio_12B12_NC_021070: hypothetical protein; VCG_001526; phage(gi481019171) 2e-64 Click
26952108..953673 PHAGE_Vibrio_12B12_NC_021070: portal protein; VCG_001527; phage(gi481019169) 0.0 Click
27953670..955229 PHAGE_Vibrio_12B12_NC_021070: hypothetical protein; VCG_001528; phage(gi481019168) 0.0 Click
28955213..955995 PHAGE_Vibrio_12B12_NC_021070: F protein; VCG_001529; phage(gi481019167) 3e-116 Click
29956007..956255 hypothetical protein; VCG_001530 0.0 Click
30956252..956764 PHAGE_Entero_RB43_NC_007023: hypothetical protein RB43ORF128w; VCG_001531; phage(gi66391579) 4e-31 Click
31957606..958109 PHAGE_Vibrio_12B12_NC_021070: I protein; VCG_001532; phage(gi481019166) 2e-50 Click
32958112..959011 PHAGE_Vibrio_12B12_NC_021070: major head subunit; VCG_001533; phage(gi481019165) 5e-149 Click
33959078..959653 PHAGE_Vibrio_12B12_NC_021070: hypothetical protein; VCG_001534; phage(gi481019162) 1e-27 Click
34959659..960093 PHAGE_Vibrio_12B12_NC_021070: hypothetical protein; VCG_001535; phage(gi481019161) 3e-69 Click
35960090..960635 PHAGE_Vibrio_12B12_NC_021070: phage virion morphogenesis protein; VCG_001536; phage(gi481019160) 2e-77 Click
36960632..961231 PHAGE_Vibrio_12B12_NC_021070: hypothetical protein; VCG_001537; phage(gi481019159) 5e-69 Click
37961246..961473 PHAGE_Acinet_Ac42_NC_014660: hypothetical protein; VCG_001538; phage(gi311992508) 9e-20 Click
38961451..961672 PHAGE_Vibrio_12B12_NC_021070: hypothetical protein; VCG_001539; phage(gi481019158) 4e-12 Click
39961675..963159 PHAGE_Vibrio_12B12_NC_021070: tail sheath protein; VCG_001540; phage(gi481019157) 0.0 Click
40963174..963527 PHAGE_Vibrio_12B12_NC_021070: tail tube protein; VCG_001541; phage(gi481019156) 8e-43 Click
41963527..963871 PHAGE_Vibrio_12B12_NC_021070: extracellular solute-binding protein family 7 protein; VCG_001542; phage(gi481019155) 4e-47 Click
42963997..965784 PHAGE_Vibrio_12B12_NC_021070: phage tail tape measure protein; VCG_001543; phage(gi481019154) 0.0 Click
43965796..967115 PHAGE_Vibrio_12B12_NC_021070: DNA circulation protein; VCG_001544; phage(gi481019153) 9e-170 Click
44967108..968184 PHAGE_Vibrio_12B12_NC_021070: P protein; VCG_001545; phage(gi481019152) 3e-156 Click
45968184..968798 PHAGE_Vibrio_12B12_NC_021070: hypothetical protein; VCG_001546; phage(gi481019151) 3e-78 Click
46968801..969250 PHAGE_Vibrio_12B12_NC_021070: hypothetical protein; VCG_001547; phage(gi481019150) 1e-57 Click
47969240..970205 PHAGE_Vibrio_12B12_NC_021070: baseplate J-like protein; VCG_001548; phage(gi481019149) 9e-131 Click
48970293..970880 PHAGE_Vibrio_12B12_NC_021070: hypothetical protein; VCG_001549; phage(gi481019148) 3e-69 Click
49970880..972112 PHAGE_Vibrio_vB_VchM_138_NC_019518: putative tail-fiber protein; VCG_001550; phage(gi422936602) 1e-137 Click
50972112..972651 PHAGE_Vibrio_vB_VchM_138_NC_019518: putative tail-fiber protein; VCG_001551; phage(gi422936603) 3e-31 Click