Vibrio cholerae 12129(1) , whole genome shotgun [asmbl_id: NC_000000].3969506, GC%: 47.70%



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            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 11 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1687572..687853 PHAGE_Vibrio_fs1: hypothetical protein fs1p10; VCG_000644; phage(gi23455832) 3e-34 Click
2687864..688067 PHAGE_Vibrio_VEJphi: hypothetical protein; VCG_000645; phage(gi238821383) 4e-37 Click
3688057..689160 PHAGE_Vibrio_1phi: putative replication protein; VCG_000646; phage(gi52221122) 0.0 Click
4688943..688954 attL    CTCGTAACAAAA 0.0 Click
5689165..689503 PHAGE_Vibrio_1phi: putative ssDNA binding protein; VCG_000647; phage(gi52221123) 1e-35 Click
6689777..689986 PHAGE_Vibrio_VCY_phi: hypothetical protein; VCG_000648; phage(gi358356475) 2e-16 Click
7690119..691537 PHAGE_Vibrio_1phi: hypothetical protein KSF-1phigpORFV; VCG_000649; phage(gi52221126) 2e-104 Click
8691537..691881 PHAGE_Vibrio_1phi: hypothetical protein KSF-1phigpORFVIII; VCG_000650; phage(gi52221129) 1e-57 Click
9691860..693254 PHAGE_Vibrio_1phi: Zot-like protein; VCG_000651; phage(gi52221130) 0.0 Click
10693759..694184 hypothetical protein; VCG_000652 0.0 Click
11694968..695711 hypothetical protein; VCG_000653 0.0 Click
12complement(695770..696192) PHAGE_Vibrio_VEJphi: putative regulator protein; VCG_000654; phage(gi238821381) 7e-63 Click
13709767..709778 attR    CTCGTAACAAAA 0.0 Click

Region 2, total : 16 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
11393765..1394139 PHAGE_Burkho_2: gp36, bacteriophage/transposase fusion protein; VCG_001312; phage(gi134288659) 2e-12 Click
21394895..1395464 PHAGE_Vibrio_CP_T1: hypothetical protein; VCG_001313; phage(gi418489254) 2e-56 Click
31395474..1395632 hypothetical protein; VCG_001314 0.0 Click
41395637..1395813 hypothetical protein; VCG_001315 0.0 Click
51395905..1396129 hypothetical protein; VCG_001316 0.0 Click
61396132..1396479 F0F1-type ATP synthase beta subunit; VCG_001317 0.0 Click
71396469..1396711 hypothetical protein; VCG_001318 0.0 Click
81396696..1396983 hypothetical protein; VCG_001319 0.0 Click
91397101..1398105 PHAGE_Stx2_c_86: hypothetical protein Stx2-86_gp15; VCG_001320; phage(gi116222007) 2e-36 Click
101398167..1399372 PHAGE_Escher_TL_2011c: hypothetical protein; VCG_001321; phage(gi418487102) 1e-134 Click
111399387..1399767 PHAGE_Escher_TL_2011c: hypothetical protein; VCG_001322; phage(gi418487103) 1e-15 Click
121399822..1400289 PHAGE_Escher_TL_2011c: hypothetical protein; VCG_001323; phage(gi418487104) 9e-33 Click
131400286..1400891 PHAGE_Escher_TL_2011c: hypothetical protein; VCG_001324; phage(gi418487105) 2e-09 Click
141400891..1401520 PHAGE_Escher_TL_2011c: hypothetical protein; VCG_001325; phage(gi418487106) 4e-24 Click
151401520..1404039 hypothetical protein; VCG_001326 0.0 Click
161404111..1405718 PHAGE_Escher_TL_2011c: hypothetical protein; VCG_001327; phage(gi418487111) 1e-114 Click

Region 3, total : 24 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
11393267..1393278 attL    GAAAGTTAAAAA 0.0 Click
21405718..1407694 PHAGE_Stx2_c_II: hypothetical protein Stx2II_gp13; VCG_001328; phage(gi302393093) 3e-60 Click
31407681..1408061 hypothetical protein; VCG_001329 0.0 Click
41408042..1408443 hypothetical protein; VCG_001330 0.0 Click
51408425..1409093 PHAGE_Stx2_c_II: hypothetical protein Stx2II_gp19; VCG_001331; phage(gi302393099) 4e-36 Click
61409094..1409474 PHAGE_Stx2_c_II: hypothetical protein Stx2II_gp20; VCG_001332; phage(gi302393100) 3e-14 Click
71409477..1409737 PHAGE_Stx2_c_II: hypothetical protein Stx2II_gp21; VCG_001333; phage(gi302393101) 1e-09 Click
81409737..1411212 PHAGE_Stx2_c_II: hypothetical protein Stx2II_gp22; VCG_001334; phage(gi302393102) 7e-08 Click
9complement(1411345..1413375) PHAGE_Lactoc_Q54: putative ribonuclease; VCG_001335; phage(gi115304286) 2e-62 Click
10complement(1413868..1414080) PHAGE_Lactoc_bIL312: Csp; VCG_001336; phage(gi13095918) 4e-15 Click
11complement(1414370..1414480) hypothetical protein; VCG_001337 0.0 Click
12complement(1414707..1417307) PHAGE_Archae_virus: hypothetical protein BJ1_gp66; VCG_001338; phage(gi119757051) 8e-06 Click
131417575..1417715 helicase Snf2 family; VCG_001339 0.0 Click
141418378..1418674 methyl-accepting chemotaxis protein; VCG_001340 0.0 Click
15complement(1418637..1419152) PROPHAGE_Xantho_33913: IS1480 transposase; VCG_001341; phage(gi21231089) 3e-08 Click
16complement(1419149..1419439) PROPHAGE_Brucel_1330: ISBm1, transposase orfA; VCG_001342; phage(gi23501424) 2e-07 Click
171419660..1429766 PHAGE_Erwini_PEp14: putative DNA methylase; VCG_001343; phage(gi374531875) 0.0 Click
181429754..1432381 PHAGE_Sinorh_PBC5: putative DNA methylase; VCG_001345; phage(gi18071214) 2e-101 Click
191433045..1433212 L-threonine 3-dehydrogenase; VCG_001346 0.0 Click
20complement(1434309..1435370) PHAGE_Sulfol_STSV1: hypothetical protein STSV1pORF37; VCG_001347; phage(gi51980163) 2e-06 Click
21complement(1435421..1436530) non-hemolytic enterotoxin lytic component L1; VCG_001348 0.0 Click
22complement(1436543..1437607) hypothetical protein; VCG_001349 0.0 Click
23complement(1437619..1438014) hypothetical protein; VCG_001350 0.0 Click
24complement(1438039..1438419) hypothetical protein; VCG_001351 0.0 Click
25complement(1439048..1439302) PHAGE_Gifsy_2: bacteriophage integrase; VCG_001352; phage(gi169257268) 2e-11 Click
261447215..1447226 attR    GAAAGTTAAAAA 0.0 Click

Region 4, total : 48 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
11618719..1620683 PHAGE_Escher_D108: DNA transposition protein A; VCG_001504; phage(gi281199647) 4e-169 Click
21620710..1621654 PHAGE_Escher_D108: DNA transposition protein B; VCG_001505; phage(gi281199648) 3e-79 Click
31621662..1621886 hypothetical protein; VCG_001506 0.0 Click
41621893..1622138 hypothetical protein; VCG_001507 0.0 Click
51622110..1622466 hypothetical protein; VCG_001508 0.0 Click
61622476..1622850 hypothetical protein; VCG_001509 0.0 Click
71622915..1623013 hypothetical protein; VCG_001510 0.0 Click
81623000..1623614 PHAGE_Burkho_KS10: hypothetical protein KS10_gp21; VCG_001511; phage(gi198449283) 9e-47 Click
91623624..1623896 hypothetical protein; VCG_001512 0.0 Click
101623889..1624131 hypothetical protein; VCG_001513 0.0 Click
111624115..1624312 hypothetical protein; VCG_001514 0.0 Click
121624309..1624779 hypothetical protein; VCG_001515 0.0 Click
131624776..1625045 PHAGE_Entero_phiEf11: asch domain protein; VCG_001516; phage(gi282598726) 8e-15 Click
141625042..1625572 PHAGE_Haemop_SuMu: hypothetical protein; VCG_001517; phage(gi418489048) 9e-31 Click
151625652..1625885 hypothetical protein; VCG_001518 0.0 Click
161626178..1626723 PHAGE_Escher_D108: hypothetical protein; VCG_001519; phage(gi281199659) 8e-27 Click
171627186..1627680 PHAGE_Escher_D108: GemB; VCG_001520; phage(gi281199660) 9e-18 Click
181627765..1628322 PHAGE_Pelagi_HTVC008M: hypothetical protein; VCG_001521; phage(gi460042628) 3e-17 Click
191628307..1628609 hypothetical protein; VCG_001522 0.0 Click
201628585..1629184 hypothetical protein; VCG_001523 0.0 Click
211629408..1629710 hypothetical protein; VCG_001524 0.0 Click
221629719..1630009 PHAGE_Escher_D108: hypothetical protein; VCG_001525; phage(gi281199669) 6e-23 Click
231630021..1630587 PHAGE_Escher_D108: hypothetical protein; VCG_001526; phage(gi281199670) 1e-30 Click
241630588..1632153 PHAGE_Escher_D108: hypothetical protein; VCG_001527; phage(gi281199671) 5e-129 Click
251632150..1633709 PHAGE_Haemop_SuMu: portal protein gp29; VCG_001528; phage(gi418489080) 1e-57 Click
261633693..1634475 PHAGE_Escher_D108: virion morphogenesis; VCG_001529; phage(gi281199673) 3e-34 Click
271634487..1634735 hypothetical protein; VCG_001530 0.0 Click
281634732..1635244 PHAGE_Entero_RB43: hypothetical protein RB43ORF128w; VCG_001531; phage(gi66391579) 3e-31 Click
291636086..1636589 PHAGE_Escher_D108: scaffold protein; VCG_001532; phage(gi281199677) 2e-05 Click
301636592..1637491 PHAGE_Pseudo_JBD88a: hypothetical protein; VCG_001533; phage(gi448244723) 5e-61 Click
311637558..1638133 hypothetical protein; VCG_001534 0.0 Click
321638139..1638573 PHAGE_Escher_D108: hypothetical protein; VCG_001535; phage(gi281199680) 9e-08 Click
331638570..1639115 PHAGE_Escher_D108: virion morphogenesis protein; VCG_001536; phage(gi281199674) 8e-06 Click
341639112..1639711 hypothetical protein; VCG_001537 0.0 Click
351639726..1639953 PHAGE_Acinet_Ac42: hypothetical protein; VCG_001538; phage(gi311992508) 6e-20 Click
361639931..1640152 hypothetical protein; VCG_001539 0.0 Click
371640155..1641639 PHAGE_Escher_D108: tail sheath protein; VCG_001540; phage(gi281199683) 2e-94 Click
381641654..1642007 PHAGE_Escher_D108: tail tube protein; VCG_001541; phage(gi281199684) 4e-05 Click
391642007..1642351 PHAGE_Escher_D108: hypothetical protein; VCG_001542; phage(gi281199685) 2e-13 Click
401642477..1644264 PHAGE_Salmon_ST64B: tail protein; VCG_001543; phage(gi23505460) 1e-05 Click
411644276..1645595 PHAGE_Escher_D108: DNA circularization protein; VCG_001544; phage(gi281199688) 1e-20 Click
421645588..1646664 PHAGE_Escher_D108: baseplate assembly protein; VCG_001545; phage(gi281199689) 4e-49 Click
431646664..1647278 PHAGE_Escher_D108: baseplate assembly protein; VCG_001546; phage(gi281199690) 2e-25 Click
441647281..1647730 PHAGE_Escher_D108: hypothetical protein; VCG_001547; phage(gi281199691) 3e-19 Click
451647720..1648685 PHAGE_Escher_D108: hypothetical protein; VCG_001548; phage(gi281199692) 3e-43 Click
461648773..1649360 PHAGE_Escher_D108: hypothetical protein; VCG_001549; phage(gi281199693) 1e-15 Click
471649360..1650592 PHAGE_Escher_D108: tail fiber protein; VCG_001550; phage(gi281199694) 2e-05 Click
481650592..1651131 PHAGE_Vibrio_vB_VchM_138: putative tail-fiber protein; VCG_001551; phage(gi422936603) 2e-31 Click