Burkholderia multivorans CGD2 , whole genome [asmbl_id: NC_000000].6554147, GC%: 67.00%



Text file for download

            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 17 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
12504097..2504108 attL    TGGCGATGGCCG 0.0 Click
2complement(2509820..2511661) phage integrase family protein; BURMUCGD2_6428 0.0 Click
3complement(2511666..2512016) conserved hypothetical protein; BURMUCGD2_6429 0.0 Click
4complement(2512013..2512960) conserved hypothetical protein; BURMUCGD2_6430 0.0 Click
5complement(2512957..2513166) hypothetical protein; BURMUCGD2_6431 0.0 Click
6complement(2513458..2514015) transcriptional regulator, XRE family; BURMUCGD2_6432 0.0 Click
7complement(2514233..2514436) hypothetical protein; BURMUCGD2_6433 0.0 Click
82514473..2514691 conserved domain protein; BURMUCGD2_6434 0.0 Click
92514691..2515101 PilT protein domain protein; BURMUCGD2_6435 0.0 Click
10complement(2515497..2515745) PROPHAGE_Xantho_33913: IS1477 transposase; BURMUCGD2_6436; phage(gi77747809) 1e-24 Click
11complement(2515951..2516757) PHAGE_Strept_SM1: gp21; BURMUCGD2_6437; phage(gi32469452) 1e-06 Click
12complement(2516757..2517788) PROPHAGE_Escher_CFT073: transposase; BURMUCGD2_6438; phage(gi26248360) 2e-86 Click
13complement(2517825..2518355) PROPHAGE_Xantho_33913: IS1477 transposase; BURMUCGD2_6439; phage(gi77747809) 2e-48 Click
14complement(2518451..2518714) PROPHAGE_Xantho_33913: IS1477 transposase; BURMUCGD2_6440; phage(gi21230912) 2e-28 Click
15complement(2518780..2520279) PROPHAGE_Brucel_1330: transposase, putative; BURMUCGD2_6441; phage(gi23501616) 7e-25 Click
16complement(2520362..2521108) conserved hypothetical protein; BURMUCGD2_6442 0.0 Click
172521836..2521847 attR    TGGCGATGGCCG 0.0 Click
18complement(2521894..2522190) conserved hypothetical protein; BURMUCGD2_6444 0.0 Click
19complement(2522204..2523931) PHAGE_Lactoc_bIL285: tail protein; BURMUCGD2_6445; phage(gi13095732) 4e-07 Click

Region 2, total : 39 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1complement(2940934..2942883) PHAGE_Parame_AR158: hypothetical protein AR158_C788L; BURMUCGD2_1233; phage(gi157953978) 1e-27 Click
22942854..2943036 peptide chain release factor 1; BURMUCGD2_1231 0.0 Click
3complement(2943023..2943427) Rod shape-determining protein RodA; BURMUCGD2_1232 0.0 Click
4complement(2943440..2943628) hypothetical protein; BURMUCGD2_1230 0.0 Click
52943627..2943809 rubredoxin; BURMUCGD2_1229 0.0 Click
62943957..2944033 tRNA 0.0 Click
72944726..2945094 hypothetical protein; BURMUCGD2_1227 0.0 Click
8complement(2945632..2946954) PHAGE_Burkho_BcepIL02: putative tail fiber protein; BURMUCGD2_1226; phage(gi238801675) 3e-71 Click
9complement(2946956..2947270) hypothetical protein; BURMUCGD2_1225 0.0 Click
10complement(2947267..2947617) PHAGE_Prochl_P_SSM2: hypothetical protein; BURMUCGD2_1224; phage(gi61805901) 1e-17 Click
11complement(2947614..2948330) PHAGE_Burkho_DC1: tail fiber protein; BURMUCGD2_1223; phage(gi401723068) 1e-25 Click
12complement(2948305..2948808) PHAGE_Burkho_BcepC6B: putative Rz protein; BURMUCGD2_1222; phage(gi48697213) 2e-48 Click
13complement(2948805..2949224) PHAGE_Klebsi_KP27: baseplate hub subunit and tail lysozyme; BURMUCGD2_1221; phage(gi448260737) 2e-10 Click
14complement(2949217..2949489) PHAGE_Burkho_BcepC6B: putative holin protein; BURMUCGD2_1220; phage(gi48697211) 1e-30 Click
15complement(2949486..2949821) PHAGE_Burkho_BcepC6B: putative holin protein; BURMUCGD2_1219; phage(gi48697210) 9e-43 Click
16complement(2949814..2952663) PHAGE_Entero_GJ1: putative tail fiber; BURMUCGD2_1218; phage(gi161617977) 5e-17 Click
17complement(2952663..2954318) PHAGE_Salmon_vB_SemP_Emek: injection protein; BURMUCGD2_1217; phage(gi399498803) 4e-10 Click
18complement(2954326..2954634) PHAGE_Yersin_phiR1_37: putative tape measure tail fibre protein; BURMUCGD2_1216; phage(gi358356566) 1e-07 Click
19complement(2954631..2955038) conserved hypothetical protein; BURMUCGD2_1215 0.0 Click
20complement(2955038..2955985) PHAGE_Entero_NJ01: putative DNA injection protein; BURMUCGD2_1214; phage(gi410490871) 2e-10 Click
21complement(2956130..2956558) hypothetical protein; BURMUCGD2_1213 0.0 Click
22complement(2956534..2956851) hypothetical protein; BURMUCGD2_1212 0.0 Click
23complement(2956851..2958320) hypothetical protein; BURMUCGD2_1211 0.0 Click
24complement(2958320..2958916) PHAGE_Sulfit_pCB2047_C: hypothetical protein; BURMUCGD2_1210; phage(gi472341748) 2e-14 Click
25complement(2958918..2959319) PHAGE_Ralsto_RSB1: putative Type II and type III secretion system protein precursor; BURMUCGD2_1209; phage(gi197935895) 4e-08 Click
26complement(2959321..2959608) hypothetical protein; BURMUCGD2_1208 0.0 Click
27complement(2959848..2960801) PHAGE_Pseudo_LUZ24: major head protein; BURMUCGD2_1207; phage(gi167600435) 2e-43 Click
28complement(2960829..2961806) PHAGE_Pseudo_vB_PaeP_p2_10_Or1: putative scaffold protein; BURMUCGD2_1206; phage(gi429315963) 2e-11 Click
29complement(2961820..2964243) PHAGE_Pseudo_LUZ24: portal protein; BURMUCGD2_1205; phage(gi167600438) 2e-81 Click
30complement(2964240..2965517) PHAGE_Sulfit_pCB2047_C: terminase; BURMUCGD2_1204; phage(gi472341810) 2e-42 Click
31complement(2965528..2965821) hypothetical protein; BURMUCGD2_1203 0.0 Click
32complement(2965787..2966080) hypothetical protein; BURMUCGD2_1202 0.0 Click
33complement(2966073..2966633) PHAGE_Burkho_BcepC6B: putative TerS; BURMUCGD2_1201; phage(gi48697192) 2e-18 Click
34complement(2966640..2966783) hypothetical protein; BURMUCGD2_1200 0.0 Click
35complement(2966885..2967160) conserved hypothetical protein; BURMUCGD2_1199 0.0 Click
36complement(2967160..2967552) hypothetical protein; BURMUCGD2_1198 0.0 Click
37complement(2967584..2967994) PHAGE_Entero_phiV10: hypothetical protein PhiV10p03; BURMUCGD2_1197; phage(gi89152424) 1e-39 Click
38complement(2968487..2968669) hypothetical protein; BURMUCGD2_1196 0.0 Click
39complement(2968696..2969520) PHAGE_Salico_CGphi29: hypothetical protein; BURMUCGD2_1195; phage(gi472340164) 4e-17 Click
40complement(2969507..2971054) PHAGE_Salmon_1: putative helicase; BURMUCGD2_1194; phage(gi169257175) 2e-45 Click

Region 3, total : 36 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
15236959..5236976 attL    ATGGTGCCGGGGACCGGA 0.0 Click
25237005..5237166 PHAGE_Burkho_BcepC6B: putative integrase protein; BURMUCGD2_2461; phage(gi48697215) 1e-07 Click
35237975..5239111 putative membrane protein; BURMUCGD2_2463 0.0 Click
4complement(5239108..5240010) PHAGE_Burkho_BcepC6B: hypothetical membrane-localized protein; BURMUCGD2_2462; phage(gi48697209) 8e-22 Click
5complement(5240007..5240501) PHAGE_Burkho_BcepC6B: putative Rz protein; BURMUCGD2_2464; phage(gi48697213) 1e-50 Click
6complement(5240498..5240917) PHAGE_Klebsi_KP27: baseplate hub subunit and tail lysozyme; BURMUCGD2_2465; phage(gi448260737) 8e-11 Click
7complement(5240904..5241182) PHAGE_Burkho_BcepC6B: putative holin protein; BURMUCGD2_2466; phage(gi48697211) 4e-43 Click
8complement(5241179..5241511) PHAGE_Burkho_BcepC6B: putative holin protein; BURMUCGD2_2467; phage(gi48697210) 4e-55 Click
9complement(5241523..5244147) PHAGE_Burkho_BcepC6B: putative tail fiber protein; BURMUCGD2_2468; phage(gi48697208) 2e-44 Click
10complement(5244206..5246815) PHAGE_Burkho_BcepC6B: hypothetical protein BcepC6B_gp17; BURMUCGD2_2469; phage(gi48697207) 0.0 Click
11complement(5246816..5249065) PHAGE_Burkho_BcepC6B: SLT domain-containing tail structural protein; BURMUCGD2_2470; phage(gi48697206) 0.0 Click
12complement(5249065..5251185) PHAGE_Burkho_BcepC6B: hypothetical protein BcepC6B_gp15; BURMUCGD2_2471; phage(gi48697205) 0.0 Click
13complement(5251193..5251798) PHAGE_Burkho_BcepC6B: hypothetical protein BcepC6B_gp14; BURMUCGD2_2472; phage(gi48697204) 2e-43 Click
14complement(5251798..5252223) PHAGE_Burkho_BcepC6B: hypothetical protein BcepC6B_gp13; BURMUCGD2_2473; phage(gi48697203) 1e-57 Click
15complement(5252213..5254516) PHAGE_Burkho_BcepC6B: hypothetical protein BcepC6B_gp12; BURMUCGD2_2474; phage(gi48697202) 0.0 Click
16complement(5254525..5255148) PHAGE_Burkho_BcepC6B: hypothetical protein BcepC6B_gp11; BURMUCGD2_2475; phage(gi48697201) 4e-101 Click
17complement(5255160..5255384) PHAGE_Burkho_BcepC6B: hypothetical protein BcepC6B_gp10; BURMUCGD2_2476; phage(gi48697200) 1e-18 Click
18complement(5255448..5255867) PHAGE_Burkho_BcepC6B: hypothetical protein BcepC6B_gp09; BURMUCGD2_2477; phage(gi48697199) 3e-67 Click
19complement(5255930..5256922) PHAGE_Burkho_BcepC6B: hypothetical protein BcepC6B_gp08; BURMUCGD2_2478; phage(gi48697198) 0.0 Click
20complement(5256932..5257657) PHAGE_Burkho_BcepC6B: hypothetical protein BcepC6B_gp07; BURMUCGD2_2479; phage(gi48697197) 6e-106 Click
21complement(5257669..5258013) PHAGE_Burkho_BcepC6B: hypothetical protein BcepC6B_gp06; BURMUCGD2_2480; phage(gi48697196) 5e-45 Click
22complement(5258010..5258306) hypothetical protein; BURMUCGD2_2481 0.0 Click
23complement(5258306..5259955) PHAGE_Burkho_BcepC6B: hypothetical protein BcepC6B_gp05; BURMUCGD2_2482; phage(gi48697195) 0.0 Click
24complement(5259952..5260179) PHAGE_Burkho_BcepC6B: hypothetical protein BcepC6B_gp04; BURMUCGD2_2483; phage(gi48697194) 4e-24 Click
25complement(5260241..5261662) PHAGE_Burkho_BcepC6B: putative TerL; BURMUCGD2_2484; phage(gi48697193) 0.0 Click
26complement(5261659..5261961) PHAGE_Erwini_phiEt88: phage terminase, small subunit; BURMUCGD2_2485; phage(gi327198562) 7e-05 Click
275262323..5262445 hypothetical protein; BURMUCGD2_2487 0.0 Click
28complement(5262426..5262794) PHAGE_Burkho_Bcep176: gp6; BURMUCGD2_2486; phage(gi77864631) 2e-07 Click
29complement(5262794..5263111) PHAGE_Acinet_Bphi_B1251: hypothetical protein; BURMUCGD2_2488; phage(gi423261993) 1e-19 Click
30complement(5263108..5264475) PHAGE_Entero_P1: Ban; BURMUCGD2_2489; phage(gi46401697) 1e-78 Click
31complement(5264472..5264753) conserved hypothetical protein; BURMUCGD2_2490 0.0 Click
32complement(5265257..5265370) hypothetical protein; BURMUCGD2_2491 0.0 Click
33complement(5265636..5265824) hypothetical protein; BURMUCGD2_2492 0.0 Click
34complement(5265821..5266096) phage regulatory protein; BURMUCGD2_2493 0.0 Click
355266243..5266440 hypothetical protein; BURMUCGD2_2494 0.0 Click
36complement(5266544..5266801) ATP-dependent Clp protease ATP-binding subunit ClpX; BURMUCGD2_2495 0.0 Click
375267107..5267505 PHAGE_Pseudo_vB_PaeS_PMG1: cI repressor protein; BURMUCGD2_2496; phage(gi374531715) 1e-11 Click
385281800..5281817 attR    ATGGTGCCGGGGACCGGA 0.0 Click

Region 4, total : 20 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
15267708..5267719 attL    CCTGCACCGCAG 0.0 Click
25269801..5270811 PROPHAGE_Escher_CFT073: transposase; BURMUCGD2_2500; phage(gi26248360) 6e-85 Click
35270811..5271617 PROPHAGE_Escher_CFT073: transposase/IS protein; BURMUCGD2_2501; phage(gi26248359) 2e-80 Click
45272369..5272785 hypothetical protein; BURMUCGD2_2502 0.0 Click
55273132..5273278 PHAGE_Entero_vB_EcoS_ACG_M12: hypothetical protein; BURMUCGD2_2503; phage(gi414087681) 5e-13 Click
65273275..5273595 PHAGE_Burkho_Bcep176: gp39; BURMUCGD2_2504; phage(gi77864664) 6e-52 Click
75273592..5273930 conserved hypothetical protein; BURMUCGD2_2505 0.0 Click
85273963..5274088 conserved hypothetical protein; BURMUCGD2_2506 0.0 Click
95274085..5274246 conserved hypothetical protein; BURMUCGD2_2507 0.0 Click
105275064..5276116 PHAGE_Entero_epsilon15: RecT; BURMUCGD2_2509; phage(gi30387413) 2e-60 Click
115276174..5276512 PHAGE_Entero_mEp213: hypothetical protein; BURMUCGD2_2510; phage(gi428782634) 1e-09 Click
125276521..5276802 PHAGE_Burkho_phi1026b: gp44; BURMUCGD2_2511; phage(gi38707934) 1e-34 Click
135276817..5278421 PHAGE_Burkho_Bcep176: gp46; BURMUCGD2_2512; phage(gi77864671) 4e-21 Click
145278411..5278839 hypothetical protein; BURMUCGD2_2513 0.0 Click
155278939..5279151 hypothetical protein; BURMUCGD2_2514 0.0 Click
165279144..5279500 putative phage protein; BURMUCGD2_2515 0.0 Click
175279497..5279637 hypothetical protein; BURMUCGD2_2516 0.0 Click
18complement(5279850..5280002) hypothetical protein; BURMUCGD2_2517 0.0 Click
195280001..5280366 conserved hypothetical protein; BURMUCGD2_2518 0.0 Click
205280363..5280611 conserved hypothetical protein; BURMUCGD2_2520 0.0 Click
215280449..5280460 attR    CCTGCACCGCAG 0.0 Click
22complement(5280596..5281633) PHAGE_Mannhe_phiMHaA1: integrase; BURMUCGD2_2519; phage(gi109289985) 2e-69 Click