Fusobacterium ulcerans ATCC 49185 .1, whole genome shotgun [asmbl_id: NC_000000].3437293, GC%: 30.33%



Text file for download

            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 23 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1complement(542286..542903) PHAGE_Staphy_2638A: ORF016; PP_00481; phage(gi66395466) 3e-19 Click
2543270..543875 prophage Sa05 BRO domain-containing protein [Streptococcus agalactiae A909] gi|76787962|ref|YP_330679.1|; PP_00482 3e-07 Click
3543872..544657 integrase family protein [Streptobacillus moniliformis DSM 12112] gi|269123142|ref|YP_003305719.1|; PP_00483 9e-08 Click
4544759..544878 hypothetical; PP_00484 0.0 Click
5544866..545276 hypothetical; PP_00485 0.0 Click
6545288..547177 PHAGE_Burkho_KS10: putative transposase; PP_00486; phage(gi198449278) 8e-23 Click
7547187..548155 PHAGE_Burkho_KS10: putative transposition protein; PP_00487; phage(gi198449279) 4e-12 Click
8548166..548417 hypothetical; PP_00488 0.0 Click
9548480..549124 PHAGE_Burkho_KS10: hypothetical protein KS10_gp21; PP_00489; phage(gi198449283) 6e-06 Click
10549127..549528 PHAGE_Burkho_BcepMu: gp02; PP_00490; phage(gi48696912) 1e-05 Click
11549609..549986 hypothetical; PP_00491 0.0 Click
12549983..550255 PHAGE_Bacill_BCJA1c: hypothetical protein BCBBV1cgp18; PP_00492; phage(gi56694886) 3e-15 Click
13550272..550505 hypothetical; PP_00493 0.0 Click
14550528..550698 hypothetical; PP_00494 0.0 Click
15550716..551510 PHAGE_Staphy_JD007: membrane protein; PP_00495; phage(gi428783050) 7e-21 Click
16551551..552144 PHAGE_Bacill_SPO1: gp0.12; PP_00496; phage(gi209972861) 2e-05 Click
17552238..552972 PHAGE_Bacill_BCP78: putative RNA polymerase sigma 28 subunit SigG; PP_00497; phage(gi410492878) 3e-09 Click
18553027..553251 hypothetical; PP_00498 0.0 Click
19553519..554415 PHAGE_Prochl_P_HM1: DNA adenine methylase; PP_00499; phage(gi326782168) 4e-05 Click
20554530..554766 hypothetical; PP_00500 0.0 Click
21complement(554784..555281) hypothetical; PP_00501 0.0 Click
22555487..555930 hypothetical; PP_00502 0.0 Click
23555917..557206 PHAGE_Staphy_CNPH82: putative large terminase subunit; PP_00503; phage(gi119953680) 5e-116 Click

Region 2, total : 24 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1558811..559599 PHAGE_Klebsi_KP36: capsid morphogenesis protein; PP_00505; phage(gi429216206) 1e-10 Click
2559599..560189 PHAGE_Bacill_PBC1: putative minor structural protein; PP_00506; phage(gi389060329) 2e-06 Click
3560206..561318 PHAGE_Synech_S_SSM7: proximal tail sheath stabilization; PP_00507; phage(gi326783796) 6e-06 Click
4561320..561490 hypothetical; PP_00508 0.0 Click
5561492..561890 hypothetical; PP_00509 0.0 Click
6561890..562342 PHAGE_Deep_s_D6E: hypothetical protein; PP_00510; phage(gi423262334) 1e-09 Click
7562345..562677 hypothetical; PP_00511 0.0 Click
8562670..563170 hypothetical; PP_00512 0.0 Click
9563163..564161 PHAGE_Erwini_4: conserved structural protein; PP_00513; phage(gi219681316) 3e-06 Click
10564174..564617 PHAGE_Pseudo_vB_PaeM_C2_10_Ab1: hypothetical protein; PP_00514; phage(gi431809991) 3e-06 Click
11564621..565073 hypothetical; PP_00515 0.0 Click
12565262..566956 hypothetical protein CXIVA_01700 [Clostridium sp. SY8519] gi|339441234|ref|YP_004707239.1|; PP_00516 1e-30 Click
13566949..567524 PHAGE_Deep_s_D6E: hypothetical protein; PP_00517; phage(gi423262338) 1e-04 Click
14567521..567853 hypothetical; PP_00518 0.0 Click
15567850..568662 PHAGE_Deep_s_D6E: hypothetical protein; PP_00519; phage(gi423262340) 5e-19 Click
16568668..569321 PHAGE_Aggreg_S1249: putative baseplate protein; PP_00520; phage(gi273809550) 3e-10 Click
17569331..569681 hypothetical; PP_00521 0.0 Click
18569678..570832 PHAGE_Deep_s_D6E: baseplate protein; PP_00522; phage(gi423262343) 6e-25 Click
19570837..571367 PHAGE_Vibrio_ICP1: hypothetical protein; PP_00523; phage(gi325171038) 4e-05 Click
20571368..572063 hypothetical; PP_00524 0.0 Click
21572076..572678 hypothetical; PP_00525 0.0 Click
22572694..573077 PHAGE_Entero_RB16: putative endolysin; PP_00526; phage(gi304373702) 6e-20 Click
23573080..573331 hypothetical; PP_00527 0.0 Click
24573335..573823 PHAGE_Staphy_S24_1: putative holin; PP_00528; phage(gi371671331) 5e-18 Click

Region 3, total : 25 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1906825..906836 attL    AAAAATTAAATT 0.0 Click
2complement(907021..908046) PROPHAGE_Oceano_HTE831: integrase; PP_00828; phage(gi23097608) 4e-12 Click
3complement(908188..908382) hypothetical; PP_00829 0.0 Click
4complement(908836..909255) hypothetical; PP_00830 0.0 Click
5complement(909239..910006) PHAGE_Ostreo_OlV5: methyltransferase; PP_00831; phage(gi472341295) 3e-17 Click
6complement(910036..910686) hypothetical protein YPK_0063 [Yersinia pseudotuberculosis YPIII] gi|170022325|ref|YP_001718830.1|; PP_00832 3e-14 Click
7complement(910691..911812) PHAGE_Marseillevirus: putative nuclease; PP_00833; phage(gi284504380) 2e-05 Click
8complement(911851..912240) PHAGE_Lactob_Lj965: putative superinfection immunity protein; PP_00834; phage(gi41179219) 1e-27 Click
9complement(912286..912924) PHAGE_Staphy_phi2958PVL: probable transcriptional repressor; PP_00835; phage(gi209363558) 2e-17 Click
10913088..913291 hypothetical protein Sterm_3925 [Sebaldella termitidis ATCC 33386] gi|269122512|ref|YP_003310689.1|; PP_00836 3e-07 Click
11913351..913548 hypothetical; PP_00837 0.0 Click
12complement(913505..913870) PHAGE_Strept_SM1: gp14; PP_00838; phage(gi32469445) 3e-10 Click
13914214..914531 AsnC family transcriptional regulator [Sebaldella termitidis ATCC 33386] gi|269120011|ref|YP_003308188.1|; PP_00839 2e-11 Click
14914545..914739 hypothetical; PP_00840 0.0 Click
15914750..914914 hypothetical; PP_00841 0.0 Click
16914927..915178 hypothetical; PP_00842 0.0 Click
17915578..915757 hypothetical; PP_00843 0.0 Click
18915758..916471 PHAGE_Thermu_77: phosphoadenosine phosphosulfate reductase; PP_00844; phage(gi257136436) 2e-07 Click
19916456..916674 hypothetical; PP_00845 0.0 Click
20916661..916834 hypothetical; PP_00846 0.0 Click
21916847..917119 hypothetical; PP_00847 0.0 Click
22917124..917300 hypothetical; PP_00848 0.0 Click
23917297..917869 Exonuclease RNase T and DNA polymerase III [Prosthecochloris aestuarii DSM 271] gi|194333877|ref|YP_002015737.1|; PP_00849 1e-31 Click
24917874..918506 PHAGE_Entero_HK629: hypothetical protein; PP_00850; phage(gi428782051) 4e-39 Click
25918522..919130 PHAGE_Escher_TL_2011c: hypothetical protein; PP_00851; phage(gi418487087) 6e-05 Click
26919148..921460 PHAGE_Pseudo_AF: putative DNA primase\helicase; PP_00852; phage(gi431810342) 2e-08 Click
27922658..922669 attR    AAAAATTAAATT 0.0 Click

Region 4, total : 28 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1922849..923787 PHAGE_Salico_CGphi29: DNA methylase; PP_00855; phage(gi472340158) 8e-57 Click
2923798..923917 hypothetical; PP_00856 0.0 Click
3923914..924093 hypothetical; PP_00857 0.0 Click
4924094..924618 hypothetical; PP_00858 0.0 Click
5924615..924866 hypothetical; PP_00859 0.0 Click
6924869..925279 sigma-70 region 4 domain-containing protein [Ethanoligenens harbinense YUAN-3] gi|317132767|ref|YP_004092081.1|; PP_00860 7e-13 Click
7925515..925946 PHAGE_Clostr_phiSM101: HNH endonuclease domain protein; PP_00861; phage(gi110804050) 3e-12 Click
8926037..926528 PHAGE_Bacill_BtCS33: phage terminase small subunit, P27 family; PP_00862; phage(gi392972711) 5e-21 Click
9926532..928238 PHAGE_Clostr_phiSM101: putative phage terminase, large subunit; PP_00863; phage(gi110804033) 5e-150 Click
10928261..929481 PHAGE_Geobac_E2: putative portal protein; PP_00864; phage(gi148747730) 1e-99 Click
11929474..930214 PHAGE_Clostr_phiMMP04: ATP-dependent Clp protease; PP_00865; phage(gi414090445) 2e-40 Click
12930217..931329 PHAGE_Bacill_phIS3501: phage major capsid protein; PP_00866; phage(gi422934331) 2e-47 Click
13931341..931619 PHAGE_Entero_EFRM31: head-tail joining protein; PP_00867; phage(gi327198117) 1e-07 Click
14931620..931955 phage head-tail adaptor [Alkaliphilus metalliredigens QYMF] gi|150390181|ref|YP_001320230.1|; PP_00868 3e-10 Click
15931961..932380 PHAGE_Clostr_phiMMP04: hypothetical protein; PP_00869; phage(gi414090449) 4e-06 Click
16932380..932832 hypothetical protein Cbei_0913 [Clostridium beijerinckii NCIMB 8052] gi|150015799|ref|YP_001308053.1|; PP_00870 5e-16 Click
17932825..933889 PHAGE_Clostr_phiMMP04: tail sheath; PP_00871; phage(gi414090451) 4e-52 Click
18933902..934336 PHAGE_Clostr_CD119: XkdM protein; PP_00872; phage(gi90592651) 6e-19 Click
19934355..934768 hypothetical; PP_00873 0.0 Click
20934771..934917 hypothetical; PP_00874 0.0 Click
21934920..935066 hypothetical; PP_00875 0.0 Click
22935175..937046 PHAGE_Geobac_E2: putative tail tape measure protein; PP_00876; phage(gi148747742) 4e-11 Click
23937060..937500 PHAGE_Clostr_phiMMP04: peptidoglycan-binding lysin domain protein; PP_00877; phage(gi414090456) 8e-09 Click
24937493..938470 PHAGE_Strept_1: hypothetical protein EJ-1p58; PP_00878; phage(gi39653732) 3e-06 Click
25938467..939021 hypothetical; PP_00879 0.0 Click
26939000..939452 PHAGE_Clostr_phiMMP04: XkdS-related protein; PP_00880; phage(gi414090460) 3e-05 Click
27939449..940507 PHAGE_Clostr_phiMMP04: baseplate J-like assembly protein; PP_00881; phage(gi414090461) 5e-53 Click
28940508..941059 PHAGE_Clostr_phiMMP04: hypothetical protein; PP_00882; phage(gi414090462) 3e-13 Click

Region 5, total : 20 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
12010404..2010835 PHAGE_Clostr_phi3626: Gp50 protein; PP_01883; phage(gi20066012) 5e-10 Click
22010949..2011404 PHAGE_Clostr_phi3626: putative terminase small subunit; PP_01884; phage(gi20065964) 4e-10 Click
32011406..2013121 PHAGE_Geobac_E2: putative terminase large subunit; PP_01885; phage(gi148747729) 1e-129 Click
42013118..2014392 PHAGE_Geobac_E2: putative portal protein; PP_01886; phage(gi148747730) 1e-89 Click
52014361..2015119 PHAGE_Clostr_phiMMP04: ATP-dependent Clp protease; PP_01887; phage(gi414090445) 2e-49 Click
62015120..2016271 PHAGE_Bacill_WBeta: putative major capsid protein; PP_01888; phage(gi85701384) 3e-74 Click
72016284..2016565 PHAGE_Clostr_phiMMP04: head-tail connector; PP_01889; phage(gi414090447) 2e-06 Click
82016566..2016898 phage head-tail adaptor [Clostridium cellulolyticum H10] gi|220930319|ref|YP_002507228.1|; PP_01890 4e-09 Click
92016902..2017309 hypothetical protein Ccel_2953 [Clostridium cellulolyticum H10] gi|220930318|ref|YP_002507227.1|; PP_01891 9e-26 Click
102017319..2017762 PHAGE_Lactob_Lj771: hypothetical protein LJ771_037; PP_01892; phage(gi163932190) 1e-06 Click
112017764..2018855 PHAGE_Clostr_phiMMP04: tail sheath; PP_01893; phage(gi414090451) 4e-43 Click
122018866..2019276 hypothetical protein CLM_1667 [Clostridium botulinum A2 str. Kyoto] gi|226948766|ref|YP_002803857.1|; PP_01894 3e-06 Click
132019316..2019759 hypothetical protein CLM_1668 [Clostridium botulinum A2 str. Kyoto] gi|226948767|ref|YP_002803858.1|; PP_01895 2e-18 Click
142019959..2022097 PHAGE_Mannhe_phiMHaA1: tail protein T; PP_01896; phage(gi109289951) 5e-24 Click
152022108..2022452 hypothetical; PP_01897 0.0 Click
162022437..2022859 PHAGE_Clostr_phiMMP04: peptidoglycan-binding lysin domain protein; PP_01898; phage(gi414090456) 1e-05 Click
172022869..2023819 PHAGE_Clostr_phiC2: putative hydrolase; PP_01899; phage(gi134287357) 2e-08 Click
182023809..2024240 nucleoside 2-deoxyribosyltransferase [Solibacillus silvestris StLB046] gi|393200162|ref|YP_006462004.1|; PP_01900 5e-05 Click
192024240..2024692 hypothetical protein CLM_1674 [Clostridium botulinum A2 str. Kyoto] gi|226948773|ref|YP_002803864.1|; PP_01901 5e-08 Click
202024685..2025776 PHAGE_Clostr_phiMMP04: baseplate J-like assembly protein; PP_01902; phage(gi414090461) 3e-36 Click

Region 6, total : 18 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
12774819..2774834 attL    TTTTATAAAAATTATA 0.0 Click
22788757..2790172 PHAGE_Burkho_BcepMu: gp39; PP_02619; phage(gi48696949) 2e-25 Click
32790189..2790725 PHAGE_Burkho_BcepMu: gp40; PP_02620; phage(gi48696950) 3e-09 Click
42790734..2791063 hypothetical protein DaAHT2_2058 [Desulfurivibrio alkaliphilus AHT2] gi|297570007|ref|YP_003691351.1|; PP_02621 3e-05 Click
52791316..2791489 PHAGE_Clostr_phiCD38_2: hypothetical protein; PP_02622; phage(gi333798138) 5e-08 Click
62791613..2791912 hypothetical; PP_02623 0.0 Click
72791926..2792744 PHAGE_Staphy_phiETA3: anti-repressor protein; PP_02624; phage(gi122891792) 2e-47 Click
82792827..2793219 hypothetical protein CKC_03715 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|315122491|ref|YP_004062980.1|; PP_02625 9e-05 Click
92793284..2795386 PHAGE_Entero_phiP27: putative tail protein; PP_02626; phage(gi18249911) 1e-55 Click
102795461..2796345 PHAGE_Bacill_SPP1: structural protein; PP_02627; phage(gi111146922) 6e-12 Click
112796332..2796541 tail X family protein [Ilyobacter polytropus DSM 2926] gi|310778824|ref|YP_003967157.1|; PP_02628 6e-09 Click
122796543..2797631 PHAGE_Burkho_BcepMu: gp47; PP_02629; phage(gi48696957) 7e-23 Click
132797628..2798125 PHAGE_Vibrio_VP882: phage baseplate assembly protein V; PP_02630; phage(gi126010859) 3e-08 Click
142798134..2798526 PHAGE_Mannhe_phiMHaA1: tail protein U; PP_02631; phage(gi109289964) 9e-05 Click
152798526..2798831 hypothetical; PP_02632 0.0 Click
162798824..2799921 PHAGE_Burkho_BcepMu: gp50; PP_02633; phage(gi48696960) 7e-36 Click
172799914..2800552 PHAGE_Entero_2: P2 gpI-like baseplate assembly protein; PP_02634; phage(gi169936031) 5e-08 Click
182800549..2801403 hypothetical protein [Desulfovibrio africanus str. Walvis Bay] gi|374301844|ref|YP_005053483.1|; PP_02635 5e-08 Click
192801382..2801397 attR    TTTTATAAAAATTATA 0.0 Click
202801487..2802461 PHAGE_Clostr_phiCD6356: putative site-specific recombinase; PP_02636; phage(gi326536904) 3e-07 Click