Clostridium asparagiforme DSM 15981 .1, [asmbl_id: NC_000000].6224391, GC%: 55.60%



Text file for download

            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 15 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1510..782 PHAGE_Bacill_SP10: hypothetical protein; CLOSTASPAR_00002; phage(gi418489661) 4e-16 Click
2786..1037 hypothetical protein; CLOSTASPAR_00003 0.0 Click
31002..1013 attL    CTGCGGATTCTG 0.0 Click
41183..2247 PHAGE_Aeromo_phiO18P: putative integrase; CLOSTASPAR_00004; phage(gi148727179) 8e-13 Click
52261..2683 hypothetical protein; CLOSTASPAR_00005 0.0 Click
62893..2966 tRNA 0.0 Click
73082..3960 PHAGE_Staphy_SpaA1: phage terminase, small subunit; CLOSTASPAR_00007; phage(gi399498865) 1e-47 Click
83947..5323 PHAGE_Clostr_phiCD38_2: terminase large subunit; CLOSTASPAR_00008; phage(gi333798109) 2e-147 Click
95332..6717 PHAGE_Clostr_phiCD38_2: minor capsid protein; CLOSTASPAR_00009; phage(gi333798110) 4e-108 Click
106722..7459 PHAGE_Clostr_phiCD38_2: minor capsid protein; CLOSTASPAR_00010; phage(gi333798111) 1e-31 Click
117460..7678 PHAGE_Clostr_phiCD38_2: minor capsid protein; CLOSTASPAR_00011; phage(gi333798111) 3e-06 Click
127950..8483 PHAGE_Lactob_phig1e: minor capsid protein; CLOSTASPAR_00012; phage(gi23455803) 3e-10 Click
138496..9689 PHAGE_Mycoba_TM4: major capsid subunit gp9; CLOSTASPAR_00013; phage(gi18496895) 2e-34 Click
149786..10197 hypothetical protein; CLOSTASPAR_00014 0.0 Click
1510198..10707 hypothetical protein; CLOSTASPAR_00015 0.0 Click
1610682..10693 attR    CTGCGGATTCTG 0.0 Click
1710721..10867 hypothetical protein; CLOSTASPAR_00016 0.0 Click
1810868..12747 PHAGE_Lactob_Lj965: putative putative minor tail protein; CLOSTASPAR_00017; phage(gi41179260) 4e-37 Click

Region 2, total : 28 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1complement(4475974..4477523) PHAGE_Synech_S_SSM7: fiber; CLOSTASPAR_05013; phage(gi326783687) 3e-05 Click
2complement(4477524..4478088) hypothetical protein; CLOSTASPAR_05014 0.0 Click
3complement(4478101..4478529) hypothetical protein; CLOSTASPAR_05015 0.0 Click
4complement(4478561..4479178) PHAGE_Strept_1: minor head protein; CLOSTASPAR_05016; phage(gi39653715) 4e-10 Click
5complement(4479314..4482337) PHAGE_Tetras_SI1: hypothetical protein; CLOSTASPAR_05017; phage(gi472342238) 8e-31 Click
64479849..4479860 attL    GTCCACCAGCTT 0.0 Click
7complement(4482371..4482763) hypothetical protein; CLOSTASPAR_05018 0.0 Click
8complement(4482763..4483215) PHAGE_Brocho_BL3: gp15; CLOSTASPAR_05019; phage(gi327409407) 2e-05 Click
9complement(4483230..4483643) PHAGE_Brocho_BL3: gp14; CLOSTASPAR_05020; phage(gi327409404) 6e-10 Click
10complement(4483659..4484018) hypothetical protein; CLOSTASPAR_05021 0.0 Click
11complement(4484015..4484536) PHAGE_Brocho_BL3: gp12; CLOSTASPAR_05022; phage(gi327409402) 4e-19 Click
12complement(4484533..4484886) PHAGE_Brocho_BL3: gp11; CLOSTASPAR_05023; phage(gi327409401) 6e-07 Click
13complement(4484843..4485202) PHAGE_Brocho_BL3: gp10; CLOSTASPAR_05024; phage(gi327409400) 2e-10 Click
14complement(4485207..4486247) PHAGE_Brocho_BL3: gp9; CLOSTASPAR_05025; phage(gi327409399) 9e-28 Click
15complement(4486267..4486953) PHAGE_Brocho_BL3: gp8; CLOSTASPAR_05026; phage(gi327409398) 6e-20 Click
16complement(4487009..4488043) PHAGE_Brocho_BL3: gp7; CLOSTASPAR_05027; phage(gi327409397) 4e-37 Click
17complement(4488036..4489424) PHAGE_Brocho_BL3: gp4; CLOSTASPAR_05028; phage(gi327409394) 1e-74 Click
18complement(4489455..4490882) PHAGE_Strept_1: terminase, large subunit; CLOSTASPAR_05029; phage(gi39653713) 3e-156 Click
19complement(4490875..4491645) PHAGE_Entero_phiFL1A: terminase small subunit; CLOSTASPAR_05030; phage(gi281416361) 5e-33 Click
20complement(4491722..4492489) PHAGE_Stenot_S1: putative methylase; CLOSTASPAR_05031; phage(gi213163922) 5e-37 Click
21complement(4492607..4493056) hypothetical protein; CLOSTASPAR_05032 0.0 Click
224492847..4492858 attR    GTCCACCAGCTT 0.0 Click
23complement(4493043..4494089) PHAGE_Lister_2389: integrase; CLOSTASPAR_05033; phage(gi17488529) 2e-11 Click
24complement(4494390..4494875) PHAGE_Clostr_phiCD38_2: hypothetical protein; CLOSTASPAR_05034; phage(gi333798112) 5e-16 Click
25complement(4494934..4495455) PHAGE_Cyanop_PSS2: type III RNAP sigma factor; CLOSTASPAR_05035; phage(gi254729465) 1e-05 Click
26complement(4495485..4496483) PHAGE_Clostr_st: PemK family transcriptional regulator; CLOSTASPAR_05036; phage(gi80159713) 2e-07 Click
27complement(4496467..4496931) hypothetical protein; CLOSTASPAR_05037 0.0 Click
28complement(4496928..4498307) PHAGE_Staphy_2: hypothetical protein SPTP3102_gp41; CLOSTASPAR_05038; phage(gi156603990) 2e-128 Click
29complement(4498304..4498594) PHAGE_Staphy_2638A: ORF037; CLOSTASPAR_05039; phage(gi66395482) 1e-13 Click
30complement(4498840..4499750) PHAGE_Entero_phiFL4A: VirE domain protein; CLOSTASPAR_05040; phage(gi281416460) 2e-77 Click

Region 3, total : 18 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
14501685..4515239 PHAGE_Acidia_virus: hypothetical protein ATV_gp61; CLOSTASPAR_05042; phage(gi75750453) 6e-20 Click
24502185..4502200 attL    TCCGGATAACGCCAGC 0.0 Click
3complement(4515240..4516669) PHAGE_Staphy_SMSAP5: virulence-associated protein E; CLOSTASPAR_05043; phage(gi422935798) 6e-103 Click
4complement(4516682..4518688) PHAGE_Staphy_SMSAP5: DNA polymerase; CLOSTASPAR_05044; phage(gi422935799) 2e-158 Click
5complement(4518732..4519451) PHAGE_Staphy_SMSAP5: hypothetical protein; CLOSTASPAR_05045; phage(gi422935814) 1e-27 Click
6complement(4519454..4520638) PHAGE_Staphy_phi7401PVL: hypothetical protein; CLOSTASPAR_05046; phage(gi448244653) 2e-65 Click
7complement(4520638..4521132) PHAGE_Agroba_7_7_1: hypothetical protein; CLOSTASPAR_05047; phage(gi435844362) 3e-05 Click
8complement(4521129..4521680) hypothetical protein; CLOSTASPAR_05048 0.0 Click
9complement(4521670..4521966) hypothetical protein; CLOSTASPAR_05049 0.0 Click
10complement(4522070..4522723) PHAGE_Microc_LMM01: hypothetical protein MaLMM01_gp061; CLOSTASPAR_05050; phage(gi117530232) 1e-10 Click
11complement(4522762..4522962) hypothetical protein; CLOSTASPAR_05051 0.0 Click
12complement(4522962..4523120) hypothetical protein; CLOSTASPAR_05052 0.0 Click
134523246..4523614 hypothetical protein; CLOSTASPAR_05053 0.0 Click
14complement(4523745..4523957) hypothetical protein; CLOSTASPAR_05054 0.0 Click
154524059..4524466 PHAGE_Clostr_phiMMP04: transcriptional regulator, XRE family; CLOSTASPAR_05055; phage(gi414090479) 9e-09 Click
16complement(4524463..4524606) hypothetical protein; CLOSTASPAR_05056 0.0 Click
17complement(4524705..4524917) PHAGE_Thermo_THSA_485A: transcriptional regulator, XRE family; CLOSTASPAR_05057; phage(gi397912660) 1e-07 Click
184525232..4526482 PHAGE_Bacill_SPBc2: site-specific recombinase; CLOSTASPAR_05058; phage(gi9630126) 2e-35 Click
194526483..4526757 PHAGE_Thermo_THSA_485A: Recombinase; CLOSTASPAR_05059; phage(gi397912662) 2e-05 Click
204529453..4529468 attR    TCCGGATAACGCCAGC 0.0 Click

Region 4, total : 12 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
15571339..5571351 attL    GGTCATTTTGCCG 0.0 Click
2complement(5574830..5576701) PHAGE_Lactob_Lj965: putative putative minor tail protein; CLOSTASPAR_06138; phage(gi41179260) 3e-37 Click
3complement(5576861..5577373) hypothetical protein; CLOSTASPAR_06139 0.0 Click
4complement(5577374..5577785) hypothetical protein; CLOSTASPAR_06140 0.0 Click
5complement(5577878..5578018) hypothetical protein; CLOSTASPAR_06141 0.0 Click
6complement(5578045..5578917) PHAGE_Clostr_CD119: putative capsid protein; CLOSTASPAR_06142; phage(gi90592716) 3e-19 Click
7complement(5578938..5579489) PHAGE_Lactob_H: putative scaffolding protein, structural protein; CLOSTASPAR_06143; phage(gi148750839) 4e-16 Click
8complement(5579714..5579932) PHAGE_Clostr_phiCD38_2: minor capsid protein; CLOSTASPAR_06144; phage(gi333798111) 2e-06 Click
9complement(5579933..5580670) PHAGE_Clostr_phiCD38_2: minor capsid protein; CLOSTASPAR_06145; phage(gi333798111) 4e-31 Click
10complement(5580675..5582027) PHAGE_Lactob_H: minor structural protein gp61; CLOSTASPAR_06146; phage(gi148750838) 2e-20 Click
11complement(5582058..5584118) PHAGE_Clostr_O: large terminase; CLOSTASPAR_06147; phage(gi208429857) 7e-103 Click
12complement(5584231..5584304) tRNA 0.0 Click
13complement(5584592..5585008) hypothetical protein; CLOSTASPAR_06149 0.0 Click
14complement(5585021..5586106) PHAGE_Lister_2389: integrase; CLOSTASPAR_06150; phage(gi17488529) 2e-10 Click
155599514..5599526 attR    GGTCATTTTGCCG 0.0 Click

Region 5, total : 47 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1complement(5677712..5679196) PHAGE_Feldma_virus: putative hybrid sensor histdine kinase; CLOSTASPAR_06260; phage(gi197322490) 4e-12 Click
2complement(5679235..5679627) hypothetical protein; CLOSTASPAR_06261 0.0 Click
3complement(5679624..5680061) hypothetical protein; CLOSTASPAR_06262 0.0 Click
4complement(5680187..5681188) hypothetical protein; CLOSTASPAR_06263 0.0 Click
5complement(5681226..5681960) PHAGE_Microm_12T: hypothetical protein; CLOSTASPAR_06264; phage(gi472342811) 7e-09 Click
6complement(5681982..5682422) hypothetical protein; CLOSTASPAR_06266 0.0 Click
75682373..5682546 hypothetical protein; CLOSTASPAR_06265 0.0 Click
8complement(5682669..5683310) PHAGE_Strept_SMP: putative lysin; CLOSTASPAR_06267; phage(gi119953752) 2e-07 Click
9complement(5683617..5683892) PHAGE_Strept_1: holin; CLOSTASPAR_06268; phage(gi39653746) 4e-22 Click
10complement(5683889..5684200) hypothetical protein; CLOSTASPAR_06269 0.0 Click
11complement(5684297..5684473) PHAGE_Lister_B054: gp28; CLOSTASPAR_06270; phage(gi157325312) 6e-07 Click
12complement(5684598..5684861) hypothetical protein; CLOSTASPAR_06271 0.0 Click
13complement(5684865..5685992) PHAGE_Bordet_1: reverse transcriptase; CLOSTASPAR_06272; phage(gi41179367) 2e-29 Click
14complement(5686412..5688169) PHAGE_Lactob_Lj771: hypothetical protein LJ771_049; CLOSTASPAR_06273; phage(gi163932148) 5e-11 Click
15complement(5688187..5688975) PHAGE_Lactob_Lj771: hypothetical protein LJ771_048; CLOSTASPAR_06274; phage(gi163932147) 2e-07 Click
16complement(5688972..5690168) PHAGE_Lactob_Lj771: element PBSX protein; CLOSTASPAR_06275; phage(gi163932146) 2e-39 Click
17complement(5690169..5690573) PHAGE_Lactob_Lj771: hypothetical protein LJ771_046; CLOSTASPAR_06276; phage(gi163932199) 1e-12 Click
18complement(5690570..5690953) PHAGE_Lactob_Lj771: hypothetical protein LJ771_045; CLOSTASPAR_06277; phage(gi163932198) 8e-07 Click
19complement(5690946..5691926) PHAGE_Lactob_Lj771: hypothetical protein LJ771_044; CLOSTASPAR_06278; phage(gi163932197) 2e-15 Click
20complement(5691940..5692662) PHAGE_Lactob_Lj771: hypothetical protein LJ771_043; CLOSTASPAR_06279; phage(gi163932196) 1e-09 Click
21complement(5692662..5695388) PHAGE_Clostr_phiC2: putative tail tape measure protein; CLOSTASPAR_06280; phage(gi134287355) 9e-159 Click
22complement(5695585..5696016) PHAGE_Lactob_Lj771: hypothetical protein LJ771_041; CLOSTASPAR_06281; phage(gi163932194) 7e-07 Click
23complement(5696116..5696598) PHAGE_Lactob_Lj771: sheath tail protein; CLOSTASPAR_06282; phage(gi163932193) 3e-16 Click
24complement(5696616..5697923) PHAGE_Lactob_Lj771: hypothetical protein LJ771_039; CLOSTASPAR_06283; phage(gi163932192) 5e-34 Click
25complement(5697925..5698128) hypothetical protein; CLOSTASPAR_06284 0.0 Click
26complement(5698139..5698564) PHAGE_Clostr_phiC2: hypothetical protein phiC2p12; CLOSTASPAR_06285; phage(gi134287347) 4e-30 Click
27complement(5698561..5699052) PHAGE_Lactob_Lj771: hypothetical protein LJ771_036; CLOSTASPAR_06286; phage(gi163932189) 9e-05 Click
28complement(5699052..5699438) PHAGE_Clostr_phiC2: hypothetical protein phiC2p10; CLOSTASPAR_06287; phage(gi134287345) 3e-21 Click
29complement(5699432..5699839) PHAGE_Clostr_phiC2: hypothetical protein phiC2p09; CLOSTASPAR_06288; phage(gi134287344) 8e-26 Click
30complement(5699840..5700916) PHAGE_Clostr_phiCD38_2: phage coat protein; CLOSTASPAR_06289; phage(gi333798114) 1e-88 Click
31complement(5700936..5701532) PHAGE_Lactob_Lj771: scaffolding protein SbcC-like protein; CLOSTASPAR_06290; phage(gi163932185) 3e-23 Click
32complement(5701846..5702082) hypothetical protein; CLOSTASPAR_06291 0.0 Click
33complement(5702098..5704605) PHAGE_Lactob_Lj771: minor head protein; CLOSTASPAR_06292; phage(gi163932184) 7e-38 Click
34complement(5704586..5704795) hypothetical protein; CLOSTASPAR_06293 0.0 Click
35complement(5704776..5706290) PHAGE_Clostr_phiC2: putative portal protein; CLOSTASPAR_06294; phage(gi134287338) 2e-61 Click
36complement(5706313..5706663) PHAGE_Bacill_Eoghan: hypothetical protein; CLOSTASPAR_06295; phage(gi460042005) 9e-05 Click
37complement(5706730..5707686) PHAGE_Strept_SMP: terminase large subunit; CLOSTASPAR_06296; phage(gi119953777) 2e-68 Click
38complement(5707967..5708518) PHAGE_Aggreg_S1249: putative terminase small subunit TerS; CLOSTASPAR_06297; phage(gi273809571) 3e-23 Click
39complement(5708675..5709178) hypothetical protein; CLOSTASPAR_06298 0.0 Click
40complement(5709420..5710328) PHAGE_Aeromo_phiAS5: hypothetical protein; CLOSTASPAR_06299; phage(gi310722732) 4e-18 Click
41complement(5710325..5710474) hypothetical protein; CLOSTASPAR_06300 0.0 Click
42complement(5710477..5711025) PHAGE_Strept_Dp_1: hypothetical protein; CLOSTASPAR_06301; phage(gi327198335) 8e-22 Click
43complement(5711022..5711252) hypothetical protein; CLOSTASPAR_06302 0.0 Click
44complement(5711240..5711857) PHAGE_Rhizob_3: p096; CLOSTASPAR_06303; phage(gi195546626) 5e-29 Click
45complement(5711943..5713832) PHAGE_Strept_6: putative DNA primase/helicase; CLOSTASPAR_06304; phage(gi28876472) 3e-36 Click
46complement(5713847..5714278) hypothetical protein; CLOSTASPAR_06305 0.0 Click
47complement(5714278..5716014) PHAGE_Lister_P35: gp33; CLOSTASPAR_06306; phage(gi157325398) 1e-45 Click

Region 6, total : 18 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
15715304..5715318 attL    ATAACAGCGGTTTTC 0.0 Click
2complement(5716851..5718578) PHAGE_Strept_PH15: putative NTP-binding protein; CLOSTASPAR_06309; phage(gi190151434) 1e-13 Click
3complement(5718575..5718988) PHAGE_Thermo_THSA_485A: VRR-NUC domain-containing protein; CLOSTASPAR_06310; phage(gi397912645) 4e-08 Click
4complement(5718997..5719296) hypothetical protein; CLOSTASPAR_06311 0.0 Click
5complement(5719301..5719744) PHAGE_Lactob_c5: hypothetical protein; CLOSTASPAR_06312; phage(gi418488176) 1e-06 Click
6complement(5719758..5720411) PHAGE_Entero_phiEco32: internal virion protein; CLOSTASPAR_06313; phage(gi167583577) 2e-05 Click
7complement(5720419..5721684) PHAGE_Thermo_THSA_485A: SNF2-related protein; CLOSTASPAR_06314; phage(gi397912655) 1e-22 Click
8complement(5721697..5721988) hypothetical protein; CLOSTASPAR_06315 0.0 Click
9complement(5721989..5722195) hypothetical protein; CLOSTASPAR_06316 0.0 Click
10complement(5722326..5722745) PHAGE_Staphy_phiPVL108: cI-like repressor; CLOSTASPAR_06317; phage(gi119443658) 1e-09 Click
11complement(5722765..5722956) hypothetical protein; CLOSTASPAR_06318 0.0 Click
12complement(5722984..5723199) hypothetical protein; CLOSTASPAR_06319 0.0 Click
13complement(5723382..5723606) hypothetical protein; CLOSTASPAR_06320 0.0 Click
14complement(5723607..5723804) hypothetical protein; CLOSTASPAR_06321 0.0 Click
15complement(5723823..5724485) PHAGE_Actino_phiAsp2: Pas43; CLOSTASPAR_06322; phage(gi48697444) 6e-09 Click
16complement(5724503..5724751) hypothetical protein; CLOSTASPAR_06323 0.0 Click
175724920..5725375 PHAGE_Strept_TP_J34: putative CI repressor homolog; CLOSTASPAR_06324; phage(gi444475878) 7e-08 Click
185725614..5725967 hypothetical protein; CLOSTASPAR_06325 0.0 Click
195726095..5727102 PHAGE_Staphy_2: integrase; CLOSTASPAR_06326; phage(gi156603950) 9e-09 Click
205741832..5741846 attR    ATAACAGCGGTTTTC 0.0 Click