Neisseria gonorrhoeae FA19 .1, whole genome shotgun sequence. [asmbl_id: NC_000000].2099891, GC%: 52.47%



Text file for download

            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 48 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1638492..638503 attL    TTCAGACGGCAT 0.0 Click
2641400..641412 attL    AAAATGCCGTCCG 0.0 Click
3642833..644050 PHAGE_Entero_P4: integrase; PP_00776; phage(gi9627511) 5e-42 Click
4complement(644406..644675) phage associated protein [Neisseria gonorrhoeae FA 1090] gi|59800901|ref|YP_207613.1|; PP_00777 4e-44 Click
5complement(644870..645553) PHAGE_Pseudo_JBD24: hypothetical protein; PP_00778; phage(gi448245062) 8e-26 Click
6complement(645871..646119) PHAGE_Shrimp_virus: wsv238; PP_00779; phage(gi17158342) 1e-16 Click
7complement(646137..646613) PHAGE_Iodoba_phiPLPE: hypothetical protein phiPLPE_84; PP_00780; phage(gi197085698) 4e-26 Click
8complement(646646..646846) phage associated protein [Neisseria gonorrhoeae FA 1090] gi|59801487|ref|YP_208199.1|; PP_00781 1e-29 Click
9complement(647168..647728) hypothetical protein NMAA_1594 [Neisseria meningitidis WUE 2594] gi|385338716|ref|YP_005892589.1|; PP_00782 2e-94 Click
10complement(647728..648426) PHAGE_Haemop_Aaphi23: putative CI protein; PP_00783; phage(gi31544010) 2e-53 Click
11648540..648770 PHAGE_Entero_c_1: prophage antirepressor; PP_00784; phage(gi428781783) 2e-05 Click
12648873..649772 PHAGE_Aggreg_S1249: replication protein; PP_00785; phage(gi273809588) 1e-15 Click
13649769..650566 PHAGE_Pseudo_F10: DNA replication protein DnaC; PP_00786; phage(gi148912818) 6e-34 Click
14650636..650788 phage associated protein [Neisseria gonorrhoeae FA 1090] gi|59801965|ref|YP_208677.1|; PP_00787 6e-17 Click
15650879..651373 PHAGE_Synech_S_CBS4: hypothetical protein; PP_00788; phage(gi374531810) 2e-05 Click
16complement(651431..651550) phage associated protein [Neisseria gonorrhoeae FA 1090] gi|59801473|ref|YP_208185.1|; PP_00789 5e-19 Click
17651550..651699 phage associated protein [Neisseria gonorrhoeae FA 1090] gi|59801473|ref|YP_208185.1|; PP_00790 5e-19 Click
18651847..652254 phage associated protein [Neisseria gonorrhoeae FA 1090] gi|59800929|ref|YP_207641.1|; PP_00791 1e-72 Click
19652326..653006 putative phage associated protein [Neisseria meningitidis WUE 2594] gi|385338731|ref|YP_005892604.1|; PP_00792 9e-112 Click
20complement(653334..653450) hypothetical; PP_00793 0.0 Click
21653433..654215 PHAGE_Aggreg_S1249: putative antirepressor protein Ant; PP_00794; phage(gi273809579) 5e-19 Click
22654637..654957 PHAGE_Entero_Sf6: gene 1 protein; PP_00795; phage(gi41057279) 3e-18 Click
23655019..656440 PHAGE_Acinet_Bphi_B1251: hypothetical protein; PP_00796; phage(gi423262000) 3e-156 Click
24656437..658584 PHAGE_Thermu_TMA: portal protein; PP_00797; phage(gi343960384) 4e-12 Click
25658652..659809 PHAGE_Thermo_THSA_485A: hypothetical protein; PP_00798; phage(gi397912637) 1e-21 Click
26659851..661350 PHAGE_Thermo_THSA_485A: hypothetical protein; PP_00799; phage(gi397912636) 7e-33 Click
27661357..661719 PHAGE_Saimir_2: unnamed protein product; PP_00800; phage(gi9626029) 4e-05 Click
28661722..662252 PHAGE_Strept_phiSASD1: gp29; PP_00801; phage(gi298103494) 1e-06 Click
29662252..662734 hypothetical protein NMAA_1620 [Neisseria meningitidis WUE 2594] gi|385338742|ref|YP_005892615.1|; PP_00802 2e-76 Click
30662731..663159 phage associated protein [Neisseria gonorrhoeae FA 1090] gi|59800940|ref|YP_207652.1|; PP_00803 4e-78 Click
31663185..663958 phage associated protein [Neisseria gonorrhoeae FA 1090] gi|59800941|ref|YP_207653.1|; PP_00804 3e-143 Click
32663966..664349 phage associated protein [Neisseria gonorrhoeae FA 1090] gi|59800942|ref|YP_207654.1|; PP_00805 8e-54 Click
33664361..664627 phage associated protein [Neisseria gonorrhoeae FA 1090] gi|59800943|ref|YP_207655.1|; PP_00806 4e-44 Click
34664627..665226 PHAGE_Caulob_CcrRogue: hypothetical protein; PP_00807; phage(gi414088956) 6e-05 Click
35665223..666077 PHAGE_Caulob_CcrMagneto: putative tail protein; PP_00808; phage(gi414088603) 3e-18 Click
36666160..666510 phage associated protein [Neisseria gonorrhoeae FA 1090] gi|59800946|ref|YP_207658.1|; PP_00809 2e-64 Click
37complement(666538..666984) PHAGE_Pseudo_phiKZ: ORF114; PP_00810; phage(gi29135050) 6e-13 Click
38667056..671201 PHAGE_Burkho_KL1: tail protein; PP_00811; phage(gi399528737) 1e-12 Click
39671186..671311 hypothetical; PP_00812 0.0 Click
40671313..671618 hypothetical protein NGO0511 [Neisseria gonorrhoeae FA 1090] gi|59800949|ref|YP_207661.1|; PP_00813 2e-52 Click
41671680..672159 phage associated protein [Neisseria gonorrhoeae FA 1090] gi|59800951|ref|YP_207663.1|; PP_00814 7e-82 Click
42672160..672492 phage associated protein [Neisseria gonorrhoeae FA 1090] gi|59800952|ref|YP_207664.1|; PP_00815 1e-55 Click
43complement(672620..672853) phage associated protein [Neisseria gonorrhoeae FA 1090] gi|59800953|ref|YP_207665.1|; PP_00816 2e-36 Click
44complement(672861..673208) PHAGE_Strept_1: transcriptional regulator; PP_00817; phage(gi39653708) 5e-08 Click
45complement(673208..673444) pemI-like protein (PemI), phage associated protein [Neisseria gonorrhoeae FA 1090] gi|59800955|ref|YP_207667.1|; PP_00818 3e-37 Click
46673651..674046 PHAGE_Pseudo_vB_Pae_Kakheti25: endolysin; PP_00819; phage(gi388542662) 1e-30 Click
47674218..674367 phage associated protein [Neisseria gonorrhoeae FA 1090] gi|59800959|ref|YP_207671.1|; PP_00820 2e-21 Click
48674397..677444 PHAGE_Burkho_KL1: tail tape measure; PP_00821; phage(gi399528734) 1e-67 Click
49complement(677504..678187) hypothetical protein NMBM01240149_1189 [Neisseria meningitidis M01-240149] gi|385342107|ref|YP_005895978.1|; PP_00822 9e-90 Click
50678190..678202 attR    AAAATGCCGTCCG 0.0 Click
51complement(678325..679314) PHAGE_Mannhe_phiMHaA1: integrase; PP_00823; phage(gi109289985) 2e-79 Click
52685531..685542 attR    TTCAGACGGCAT 0.0 Click

Region 2, total : 23 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1888474..888485 attL    GATTTTGGCGAT 0.0 Click
2896867..897880 PHAGE_Pseudo_LBL3: putative structural protein; PP_01064; phage(gi197261393) 4e-05 Click
3897925..898065 phage associated protein [Neisseria gonorrhoeae FA 1090] gi|59801142|ref|YP_207854.1|; PP_01065 9e-21 Click
4898170..898553 PHAGE_Haemop_HP2: hypothetical protein HP2p14; PP_01066; phage(gi17981828) 2e-14 Click
5898601..898864 hypothetical protein NMCC_0719 [Neisseria meningitidis 053442] gi|161869699|ref|YP_001598866.1|; PP_01067 4e-09 Click
6complement(898869..898991) PHAGE_Aggreg_S1249: hypothetical protein; PP_01068; phage(gi273809543) 1e-10 Click
7complement(899015..899188) hypothetical protein NMBB_1245 [Neisseria meningitidis alpha710] gi|385328414|ref|YP_005882717.1|; PP_01069 3e-18 Click
8complement(899191..899628) PHAGE_Aggreg_S1249: putative tail fiber assembly protein; PP_01070; phage(gi273809545) 1e-15 Click
9899710..900003 Plasmid maintenance system killer protein; Toxin higB-1 [Neisseria meningitidis alpha710] gi|385328333|ref|YP_005882636.1|; PP_01071 3e-32 Click
10900000..900311 PHAGE_Yersin_phiR1_37: putative plasmid maintenance system antidote protein; PP_01072; phage(gi358356792) 1e-08 Click
11complement(900327..900449) phage associated protein [Neisseria gonorrhoeae FA 1090] gi|59801145|ref|YP_207857.1|; PP_01074 2e-06 Click
12900553..900717 hypothetical; PP_01073 0.0 Click
13complement(900768..902018) PHAGE_Haemop_HP2: tail fibers; PP_01075; phage(gi17981847) 9e-60 Click
14complement(902450..903019) PHAGE_Haemop_HP2: tail fibers; PP_01076; phage(gi17981847) 1e-17 Click
15complement(903059..903286) PHAGE_Burkho_phiE255: gp25, tail fiber; PP_01077; phage(gi134288819) 2e-09 Click
16complement(903246..904508) PROPHAGE_Salmon_Ty2: phage baseplate assembly protein; PP_01078; phage(gi29143752) 3e-43 Click
17complement(904529..904855) PHAGE_Pseudo_phiCTX: predicted baseplate; PP_01080; phage(gi17313236) 9e-18 Click
18complement(904852..905046) PHAGE_Escher_D108: baseplate assembly protein; PP_01079; phage(gi281199690) 9e-05 Click
19complement(905146..905352) hypothetical; PP_01081 0.0 Click
20complement(905442..905564) hypothetical; PP_01084 0.0 Click
21complement(905537..906043) phage associated protein [Neisseria gonorrhoeae FA 1090] gi|59801150|ref|YP_207862.1|; PP_01082 7e-48 Click
22complement(906080..906343) phage associated protein [Neisseria gonorrhoeae FA 1090] gi|59801151|ref|YP_207863.1|; PP_01083 3e-41 Click
23906215..906226 attR    GATTTTGGCGAT 0.0 Click
24complement(906363..906611) putative phage integrase [Neisseria meningitidis alpha710] gi|385328705|ref|YP_005883008.1|; PP_01085 8e-40 Click
25complement(906572..907642) PROPHAGE_Escher_CFT073: prophage P4 integrase; PP_01086; phage(gi26249391) 5e-43 Click

Region 3, total : 36 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
11259519..1259530 attL    CAAAATCGGAAT 0.0 Click
21265068..1265919 PHAGE_Haemop_Aaphi23: putative antirepressor protein Ant; PP_01526; phage(gi31544021) 6e-38 Click
3complement(1265956..1266111) phage associated protein [Neisseria gonorrhoeae FA 1090] gi|59801453|ref|YP_208165.1|; PP_01527 2e-18 Click
4complement(1266108..1266782) PHAGE_Pseudo_F116: hypothetical protein F116p46; PP_01528; phage(gi56692957) 4e-47 Click
5complement(1266779..1267264) PHAGE_Pseudo_F116: hypothetical protein F116p45; PP_01529; phage(gi56692956) 2e-10 Click
6complement(1267270..1267788) PHAGE_Pseudo_F116: virion structural protein; PP_01530; phage(gi56692924) 1e-28 Click
7complement(1267801..1269096) PHAGE_Pseudo_F116: virion structural protein; PP_01531; phage(gi56692923) 5e-136 Click
8complement(1269117..1269629) PHAGE_Pseudo_F116: hypothetical protein F116p42; PP_01532; phage(gi56692955) 6e-20 Click
9complement(1269722..1275805) PHAGE_Pseudo_F116: hypothetical protein F116p60; PP_01533; phage(gi56692971) 9e-40 Click
10complement(1275837..1276982) PHAGE_Human__4: EBNA-1; PP_01534; phage(gi82503233) 3e-07 Click
11complement(1276979..1278175) PHAGE_Pseudo_F116: hypothetical protein F116p58; PP_01535; phage(gi56692969) 1e-05 Click
121278348..1278461 hypothetical; PP_01536 0.0 Click
13complement(1278413..1280668) PHAGE_Pseudo_F116: portal protein; PP_01537; phage(gi56692922) 0.0 Click
14complement(1280665..1281939) PHAGE_Bdello_phi1422: putative TerL large-subunit terminase; PP_01538; phage(gi422936857) 3e-55 Click
15complement(1281920..1282492) PHAGE_Escher_HK639: terminase small subunit; PP_01539; phage(gi356870601) 6e-09 Click
16complement(1282459..1282881) PHAGE_Pseudo_F116: hypothetical protein F116p37; PP_01540; phage(gi56692953) 6e-17 Click
17complement(1282946..1283464) PHAGE_Xantho_OP1: HNH endonuclease family protein; PP_01541; phage(gi84662624) 1e-31 Click
18complement(1283455..1283838) PHAGE_Pseudo_PAJU2: putative NinB; PP_01542; phage(gi209552487) 7e-21 Click
19complement(1283835..1284140) PHAGE_Pseudo_F116: hypothetical protein F116p35; PP_01543; phage(gi56692951) 4e-15 Click
20complement(1284269..1284418) phage associated protein [Neisseria gonorrhoeae FA 1090] gi|59801967|ref|YP_208679.1|; PP_01544 2e-51 Click
211284418..1284765 phage associated protein [Neisseria gonorrhoeae FA 1090] gi|59801967|ref|YP_208679.1|; PP_01545 2e-51 Click
22complement(1284803..1285297) PHAGE_Synech_S_CBS4: hypothetical protein; PP_01547; phage(gi374531810) 2e-05 Click
23complement(1285311..1285562) phage associated protein [Neisseria gonorrhoeae FA 1090] gi|59801476|ref|YP_208188.1|; PP_01546 5e-35 Click
24complement(1285579..1286937) PHAGE_Marino_P12026: replicative DNA helicase; PP_01548; phage(gi399528354) 2e-60 Click
25complement(1286934..1287998) PHAGE_Haemop_Aaphi23: putative DNA replication protein O; PP_01549; phage(gi31544014) 1e-35 Click
26complement(1288002..1288187) PHAGE_Pseudo_F116: Cro-like protein; PP_01550; phage(gi56692919) 1e-11 Click
271288324..1289079 PHAGE_Pseudo_F116: transcriptional regulator; PP_01551; phage(gi56692918) 8e-24 Click
281289342..1290172 phage associated protein [Neisseria gonorrhoeae FA 1090] gi|59801957|ref|YP_208669.1|; PP_01552 3e-152 Click
291290342..1290524 PHAGE_Haemop_HP2: hypothetical protein HP2p13; PP_01553; phage(gi19289355) 1e-12 Click
301290626..1291027 PHAGE_Haemop_HP2: hypothetical protein HP2p14; PP_01554; phage(gi17981828) 9e-16 Click
311291146..1291793 PHAGE_Salmon_vB_SemP_Emek: hypothetical protein; PP_01555; phage(gi399498806) 5e-08 Click
32complement(1292162..1292311) hypothetical; PP_01556 0.0 Click
33complement(1292308..1293069) hypothetical protein AXYL_04034 [Achromobacter xylosoxidans A8] gi|311107216|ref|YP_003980069.1|; PP_01557 4e-29 Click
341293279..1293473 phage associated protein [Neisseria gonorrhoeae FA 1090] gi|59801952|ref|YP_208664.1|; PP_01558 1e-18 Click
351293482..1294360 phage associated protein [Neisseria gonorrhoeae FA 1090] gi|59801943|ref|YP_208655.1|; PP_01559 8e-170 Click
361294468..1294734 phage associated protein [Neisseria gonorrhoeae FA 1090] gi|59801942|ref|YP_208654.1|; PP_01560 3e-44 Click
371294703..1294714 attR    CAAAATCGGAAT 0.0 Click
38complement(1294784..1295938) PHAGE_Burkho_AH2: integrase; PP_01561; phage(gi399529076) 2e-49 Click