Ruegeria sp. R11 whole genome shotgun sequence. [asmbl_id: NC_000000].3819029, GC%: 60.01%



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            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 33 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1555810..555821 attL    CAGGCCGTCAGA 0.0 Click
2562323..563981 PHAGE_Salmon_SPN19: putative lambda family portal protein B; PP_00553; phage(gi414090190) 3e-42 Click
3563978..564238 hypothetical protein PSE_3039 [Pseudovibrio sp. FO-BEG1] gi|374331385|ref|YP_005081569.1|; PP_00554 2e-11 Click
4564256..565389 PHAGE_Microb_Min1: Clp protease; PP_00555; phage(gi149882820) 5e-30 Click
5565402..565776 phage protein Gp19 [Bartonella grahamii as4aup] gi|240849985|ref|YP_002971377.1|; PP_00556 8e-16 Click
6565787..566809 PHAGE_Vibrio_vB_VpaM_MAR: hypothetical protein; PP_00557; phage(gi428782731) 8e-18 Click
7566880..567248 hypothetical protein Oant_1776 [Ochrobactrum anthropi ATCC 49188] gi|153009106|ref|YP_001370321.1|; PP_00558 1e-09 Click
8567248..568030 hypothetical protein PSE_3045 [Pseudovibrio sp. FO-BEG1] gi|374331391|ref|YP_005081575.1|; PP_00559 2e-37 Click
9568116..568499 PHAGE_Ralsto_phiRSA1: baseplate assembly protein V; PP_00560; phage(gi145708093) 4e-07 Click
10568811..569017 hypothetical; PP_00561 0.0 Click
11569024..569413 PHAGE_Vibrio_vB_VpaM_MAR: baseplate assembly protein; PP_00562; phage(gi428782737) 5e-17 Click
12569410..570366 PROPHAGE_Salmon_Ty2: phage baseplate assembly protein; PP_00563; phage(gi29143752) 2e-34 Click
13570347..571081 PHAGE_Vibrio_vB_VpaM_MAR: tail protein; PP_00564; phage(gi428782739) 2e-21 Click
14571081..571734 PHAGE_Erwini_ENT90: phage tail collar domain protein; PP_00565; phage(gi431810938) 2e-06 Click
15571790..572083 hypothetical; PP_00566 0.0 Click
16572197..572955 hypothetical; PP_00567 0.0 Click
17572967..573449 PHAGE_Microc_LMM01: hypothetical protein MaLMM01_gp042; PP_00568; phage(gi117530213) 1e-09 Click
18573574..574755 PHAGE_Vibrio_vB_VpaM_MAR: tail sheath protein; PP_00569; phage(gi428782746) 3e-57 Click
19574841..575350 PHAGE_Mannhe_phiMHaA1: tail tube protein FII; PP_00570; phage(gi109289961) 1e-11 Click
20575360..575707 hypothetical; PP_00571 0.0 Click
21complement(575859..576128) hypothetical; PP_00572 0.0 Click
22576127..579126 PHAGE_Vibrio_VP882: phage-related tail protein; PP_00573; phage(gi126010872) 3e-81 Click
23579195..579563 PROPHAGE_Xylell_Temecula1: phage-related tail protein; PP_00574; phage(gi28198982) 4e-12 Click
24579563..579772 PHAGE_Vibrio_vB_VpaM_MAR: putative tail protein; PP_00575; phage(gi428782752) 2e-08 Click
25579769..580764 PHAGE_Vibrio_vB_VpaM_MAR: putative tail protein; PP_00576; phage(gi428782753) 1e-44 Click
26580800..581153 PHAGE_Pseudo_Lu11: putative tail assembly protein; PP_00577; phage(gi388684690) 5e-05 Click
27581166..581543 hypothetical; PP_00578 0.0 Click
28581582..581752 hypothetical; PP_00579 0.0 Click
29581838..582398 PHAGE_Roseop_EE36P1: putative lysis protein; PP_00580; phage(gi237651529) 9e-26 Click
30582398..582697 hypothetical; PP_00581 0.0 Click
31582717..582896 hypothetical; PP_00582 0.0 Click
32complement(583397..584449) PHAGE_Ectoca_1: EsV-1-65; PP_00583; phage(gi13242537) 1e-12 Click
33complement(584913..589331) PHAGE_Cronob_vB_CsaM_GAP32: long tail fiber proximal subunit; PP_00584; phage(gi414087138) 7e-33 Click
34complement(589548..590609) PHAGE_Burkho_AH2: integrase; PP_00585; phage(gi399529076) 5e-104 Click
35604318..604329 attR    CAGGCCGTCAGA 0.0 Click

Region 2, total : 20 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1722272..723525 PHAGE_Strept_6: terminase large subunit; PP_00723; phage(gi93007440) 1e-54 Click
2723787..724980 PHAGE_Tetras_SI1: portal protein; PP_00724; phage(gi472342257) 5e-19 Click
3724973..725191 hypothetical protein PGA2_c17540 [Phaeobacter gallaeciensis 2.10] gi|400754628|ref|YP_006562996.1|; PP_00725 2e-26 Click
4725227..725838 PHAGE_Tetras_SI1: phage prohead protease; PP_00726; phage(gi472342256) 2e-26 Click
5725914..727098 PHAGE_Azospi_Cd: Phage major capsid protein; PP_00727; phage(gi168495136) 9e-64 Click
6727136..727876 PHAGE_Rhodob_RcapNL: hypothetical protein; PP_00728; phage(gi461474967) 9e-10 Click
7727878..728246 gene transfer agent head-tail adaptor [Phaeobacter gallaeciensis 2.10] gi|400754624|ref|YP_006562992.1|; PP_00729 4e-47 Click
8728243..728650 gene transfer agent protein [Phaeobacter gallaeciensis 2.10] gi|400754623|ref|YP_006562991.1|; PP_00730 4e-52 Click
9728752..729165 PHAGE_Rhodob_RcapNL: gene transfer aget (GTA) orfg9-like phage major tail protein; PP_00731; phage(gi461474972) 3e-16 Click
10729219..729554 hypothetical protein PGA2_c17470 [Phaeobacter gallaeciensis 2.10] gi|400754621|ref|YP_006562989.1|; PP_00732 4e-26 Click
11729551..729823 hypothetical protein SPO2255 [Ruegeria pomeroyi DSS-3] gi|56697117|ref|YP_167480.1|; PP_00733 2e-14 Click
12729805..730461 PHAGE_Vibrio_vB_VpaS_MAR10: tail tape measure protein; PP_00734; phage(gi428782128) 4e-13 Click
13730561..731217 PHAGE_Roseob_1: putative glycoside hydrolase; PP_00735; phage(gi331028135) 8e-44 Click
14731214..732203 PHAGE_Tetras_SI1: hypothetical protein; PP_00736; phage(gi472342235) 3e-24 Click
15732200..732715 PHAGE_Roseob_1: phage cell wall peptidase; PP_00737; phage(gi331028137) 2e-30 Click
16732715..736719 PHAGE_Tetras_SI1: hypothetical protein; PP_00738; phage(gi472342233) 2e-31 Click
17736719..737024 hypothetical protein PGA2_c17400 [Phaeobacter gallaeciensis 2.10] gi|400754614|ref|YP_006562982.1|; PP_00739 4e-31 Click
18complement(736991..737110) hypothetical; PP_00740 0.0 Click
19737355..738173 serine acetyltransferase CysE [Phaeobacter gallaeciensis 2.10] gi|400754613|ref|YP_006562981.1|; PP_00741 3e-145 Click
20complement(738391..739719) PHAGE_Burkho_BcepMigl: virion associated protein; PP_00742; phage(gi431809925) 5e-08 Click