Collinsella stercoris DSM 13279 .1, whole [asmbl_id: NC_000000].2399821, GC%: 63.19%



Text file for download

            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 23 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
11042083..1042095 attL    TTCCTCCTGCTGC 0.0 Click
21042350..1043258 PHAGE_Pseudo_phiCTX: integrase; COLSTE_01092; phage(gi17313264) 6e-12 Click
31043352..1043516 hypothetical protein; COLSTE_01093 0.0 Click
41043541..1043774 hypothetical protein; COLSTE_01094 0.0 Click
5complement(1043873..1044115) hypothetical protein; COLSTE_01095 0.0 Click
6complement(1044091..1044630) hypothetical protein; COLSTE_01096 0.0 Click
7complement(1044644..1045429) PHAGE_Pectob_My1: YadA domain-containing protein; COLSTE_01097; phage(gi410491156) 4e-05 Click
8complement(1045416..1045643) hypothetical protein; COLSTE_01098 0.0 Click
9complement(1045652..1048204) PHAGE_Bacill_BCJA1c: host specificity protein; COLSTE_01099; phage(gi56694921) 2e-32 Click
10complement(1048204..1048917) PHAGE_Strept_1: putative tail protein; COLSTE_01100; phage(gi28876188) 1e-06 Click
11complement(1048914..1050070) PHAGE_Entero_phiFL4A: tail tape measure protein; COLSTE_01101; phage(gi281416482) 3e-48 Click
12complement(1050071..1051340) PHAGE_Clostr_phiCD38_2: tail tape measure; COLSTE_01102; phage(gi333798123) 6e-48 Click
13complement(1051343..1051999) PHAGE_Bacill_PBC1: hypothetical protein; COLSTE_01103; phage(gi389060338) 8e-06 Click
14complement(1051996..1052532) hypothetical protein; COLSTE_01104 0.0 Click
15complement(1052635..1053345) PHAGE_Bacill_PBC1: major capsid protein gpP; COLSTE_01105; phage(gi389060336) 8e-21 Click
16complement(1053359..1053754) hypothetical protein; COLSTE_01106 0.0 Click
17complement(1053756..1054109) PHAGE_Bacill_PBC1: putative minor capsid protein 2; COLSTE_01107; phage(gi389060334) 3e-07 Click
18complement(1054106..1054393) hypothetical protein; COLSTE_01108 0.0 Click
19complement(1054426..1054767) hypothetical protein; COLSTE_01109 0.0 Click
20complement(1054769..1055680) PHAGE_Clostr_CD119: putative capsid protein; COLSTE_01110; phage(gi90592716) 4e-32 Click
21complement(1055690..1056226) hypothetical protein; COLSTE_01111 0.0 Click
22complement(1056241..1056423) hypothetical protein; COLSTE_01112 0.0 Click
23complement(1056430..1056612) hypothetical protein; COLSTE_01113 0.0 Click
24complement(1056612..1057367) PHAGE_Lactob_1: antirepressor; COLSTE_01114; phage(gi219563224) 6e-52 Click
251071041..1071053 attR    TTCCTCCTGCTGC 0.0 Click

Region 2, total : 26 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
11984116..1984132 attL    CATTGCGCTTCTCCTTT 0.0 Click
2complement(1997720..2000659) PHAGE_Bacill_BCJA1c: host specificity protein; COLSTE_02153; phage(gi56694921) 6e-20 Click
3complement(2000650..2001396) PHAGE_Bacill_phIS3501: phage tail component; COLSTE_02154; phage(gi422934339) 4e-07 Click
4complement(2001377..2004031) PHAGE_Geobac_E2: putative tail tape measure protein; COLSTE_02155; phage(gi148747742) 1e-42 Click
5complement(2004309..2004716) hypothetical protein; COLSTE_02156 0.0 Click
6complement(2004716..2005327) PHAGE_Bacill_1: hypothetical protein BV1_gp28; COLSTE_02157; phage(gi155042943) 7e-15 Click
7complement(2005340..2005639) PHAGE_Bacill_1: Putative aminopeptidase; COLSTE_02158; phage(gi155042942) 1e-06 Click
8complement(2005663..2006034) PHAGE_Bacill_1: hypothetical protein BV1_gp26; COLSTE_02159; phage(gi155042941) 1e-05 Click
9complement(2006027..2006338) PHAGE_Bacill_1: hypothetical protein BV1_gp25; COLSTE_02160; phage(gi158348414) 1e-09 Click
10complement(2006335..2006640) hypothetical protein; COLSTE_02161 0.0 Click
11complement(2006654..2007910) PHAGE_Clostr_phiMMP04: major capsid protein; COLSTE_02162; phage(gi414090446) 8e-24 Click
12complement(2007914..2008561) PHAGE_Entero_EFRM31: prohead protease; COLSTE_02163; phage(gi327198114) 3e-17 Click
13complement(2008536..2009789) PHAGE_Clostr_phiMMP04: phage portal protein; COLSTE_02164; phage(gi414090444) 3e-35 Click
14complement(2009808..2011544) PHAGE_Clostr_phiMMP04: terminase; COLSTE_02165; phage(gi414090443) 7e-148 Click
15complement(2011528..2011947) hypothetical protein; COLSTE_02166 0.0 Click
16complement(2012120..2012434) PHAGE_Bacill_1: HNH endonuclease; COLSTE_02167; phage(gi155042931) 3e-14 Click
17complement(2012454..2012541) tRNA 0.0 Click
18complement(2012642..2013100) hypothetical protein; COLSTE_02169 0.0 Click
19complement(2013101..2013538) PHAGE_Erwini_vB_EamP_S6: deoxyuridine 5'-triphosphate nucleotidohydrolase; COLSTE_02170; phage(gi422935886) 3e-23 Click
20complement(2013535..2013816) hypothetical protein; COLSTE_02171 0.0 Click
21complement(2013806..2014252) PHAGE_Temper_1: single-strand binding protein; COLSTE_02172; phage(gi16271789) 1e-16 Click
22complement(2014242..2014412) hypothetical protein; COLSTE_02173 0.0 Click
23complement(2014406..2014783) hypothetical protein; COLSTE_02174 0.0 Click
24complement(2014843..2015127) hypothetical protein; COLSTE_02175 0.0 Click
25complement(2015281..2016456) PHAGE_Bacill_1: DNA integration/recombination /inversion; COLSTE_02176; phage(gi155042957) 4e-15 Click
26complement(2016461..2016637) hypothetical protein; COLSTE_02177 0.0 Click
27complement(2016650..2016796) hypothetical protein; COLSTE_02178 0.0 Click
28complement(2016793..2017074) PHAGE_Strept_PH15: hypothetical protein phiPH15_gp25; COLSTE_02179; phage(gi190151440) 9e-10 Click
292017292..2017308 attR    CATTGCGCTTCTCCTTT 0.0 Click