Clostridium thermocellum JW20 whole genome shotgun [asmbl_id: NC_000000].3767546, GC%: 39.05%



Text file for download

            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 7 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
12126243..2126256 attL    AATTAAAAAATTAT 0.0 Click
2complement(2137831..2138193) PHAGE_Clostr_phiC2: putative transcriptional regulator; Cther_2967; phage(gi134287378) 6e-06 Click
3complement(2138374..2139942) PHAGE_Geobac_E2: putative recombinase; Cther_2968; phage(gi148747753) 3e-35 Click
4complement(2139905..2140363) PHAGE_Deep_s_D6E: recombinase; Cther_2969; phage(gi423262352) 6e-05 Click
5complement(2140360..2141928) PHAGE_Bacill_Fah: site-specific serine recombinase; Cther_2970; phage(gi89152504) 1e-38 Click
6complement(2141990..2142208) conserved hypothetical protein; Cther_2971 0.0 Click
7complement(2142262..2143266) PHAGE_Entero_phiFL4A: endolysin; Cther_2972; phage(gi281416489) 1e-09 Click
8complement(2143263..2143682) PHAGE_Bacill_Fah: holin; Cther_2973; phage(gi89152494) 1e-28 Click
92149233..2149246 attR    AATTAAAAAATTAT 0.0 Click

Region 2, total : 22 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
13276652..3276663 attL    AATGTTAATTAA 0.0 Click
23276833..3276845 attL    AAAATAAATCATA 0.0 Click
3complement(3279717..3281033) PHAGE_Bacill_WBeta: putative site-specific recombinase; Cther_0384; phage(gi85701406) 2e-27 Click
4complement(3281113..3281874) PHAGE_Lactob_Lj965: hypothetical protein Ljo_0291; Cther_0385; phage(gi41179221) 2e-38 Click
5complement(3281876..3282298) conserved hypothetical protein; Cther_0386 0.0 Click
63282349..3282361 attR    AAAATAAATCATA 0.0 Click
7complement(3282463..3283245) PHAGE_Staphy_StB20: integrase; Cther_0387; phage(gi431809731) 4e-13 Click
8complement(3283399..3284172) PHAGE_Acidia_virus: hypothetical protein ATV_gp44; Cther_0388; phage(gi75750441) 5e-08 Click
9complement(3284208..3285053) conserved hypothetical protein; Cther_0389 0.0 Click
10complement(3285132..3285590) PHAGE_Clostr_phiCD27: hypothetical protein phiCD27_gp43; Cther_0390; phage(gi209901280) 2e-33 Click
11complement(3285674..3286096) protein of unknown function DUF1863; Cther_0391 0.0 Click
123287135..3287341 PHAGE_Clostr_phiC2: hypothetical protein phiC2p05; Cther_0393; phage(gi134287340) 4e-05 Click
133287385..3288071 PHAGE_Staphy_PH15: putative phage minor capsid protein; Cther_0394; phage(gi119967838) 8e-21 Click
143288090..3289013 PHAGE_Clostr_CD119: putative capsid protein; Cther_0395; phage(gi90592716) 3e-72 Click
153289121..3289555 Protein of unknown function DUF2742; Cther_0396 0.0 Click
163289552..3289887 PHAGE_Clostr_CD119: hypothetical protein CDBPCV119_gp11; Cther_0397; phage(gi90592647) 2e-05 Click
173289884..3290306 PHAGE_Lactob_KC5a: hypothetical protein; Cther_0398; phage(gi90592617) 4e-07 Click
183290296..3290709 PHAGE_Lactob_KC5a: hypothetical protein; Cther_0399; phage(gi90592618) 4e-05 Click
193290714..3291754 PHAGE_Lactob_KC5a: putative phage sheath tail protein; Cther_0400; phage(gi90592620) 5e-37 Click
203291771..3292247 PHAGE_Lactob_KC5a: putative phage core tail protein; Cther_0401; phage(gi90592621) 1e-13 Click
213292318..3292878 hypothetical protein; Cther_0402 0.0 Click
223292972..3293379 PHAGE_Lactob_KC5a: hypothetical protein; Cther_0403; phage(gi90592622) 1e-14 Click
233293513..3293692 hypothetical protein; Cther_0404 0.0 Click
243294413..3294805 conserved hypothetical protein; Cther_0405 0.0 Click
253295565..3296896 PHAGE_Clostr_st: metallo beta-lactamase family protein; Cther_0406; phage(gi80159793) 6e-91 Click
263311049..3311060 attR    AATGTTAATTAA 0.0 Click