Bifidobacterium longum subsp. infantis CCUG 52486 .1, whole [asmbl_id: NC_000000].2453376, GC%: 60.17%



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            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 16 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1432217..432228 attL    GATCGAGGCGCT 0.0 Click
2434773..436236 PHAGE_Rhodoc_RRH1: terminase large subunit; PP_00386; phage(gi372449802) 4e-46 Click
3436322..437434 PHAGE_Strept_TG1: putative portal protein; PP_00387; phage(gi410491911) 8e-27 Click
4437424..439010 PHAGE_Marino_P12026: phage prohead protease; PP_00388; phage(gi399528321) 9e-15 Click
5439013..439348 hypothetical protein BL0377 [Bifidobacterium longum NCC2705] gi|23464974|ref|NP_695577.1|; PP_00389 8e-19 Click
6439345..439710 hypothetical protein BL0378 [Bifidobacterium longum NCC2705] gi|23464975|ref|NP_695578.1|; PP_00390 9e-15 Click
7439728..440153 PHAGE_Rhodoc_RRH1: putative tail protein; PP_00391; phage(gi372449810) 4e-15 Click
8440153..440536 PHAGE_Rhodoc_RRH1: hypothetical protein; PP_00392; phage(gi372449811) 9e-05 Click
9440540..440803 hypothetical protein BBB_1644 [Bifidobacterium bifidum BGN4] gi|390937553|ref|YP_006395113.1|; PP_00393 3e-14 Click
10440830..440970 hypothetical protein BBB_1645 [Bifidobacterium bifidum BGN4] gi|390937554|ref|YP_006395114.1|; PP_00394 1e-08 Click
11440963..443032 PHAGE_Lactoc_jj50: tail tape measure; PP_00395; phage(gi115315642) 2e-46 Click
12443032..444558 hypothetical protein BL0382 [Bifidobacterium longum NCC2705] gi|23464979|ref|NP_695582.1|; PP_00396 0.0 Click
13444555..445259 hypothetical; PP_00397 0.0 Click
14445274..445498 hypothetical protein BDP_0598 [Bifidobacterium dentium Bd1] gi|283455525|ref|YP_003360089.1|; PP_00398 6e-19 Click
15445513..446367 PHAGE_Lactoc_asccphi28: hypothetical protein ASCCphi28_gp19; PP_00399; phage(gi168983493) 2e-07 Click
16446229..446240 attR    GATCGAGGCGCT 0.0 Click
17446370..446627 PHAGE_Lactoc_bIL309: holin; PP_00400; phage(gi13095860) 1e-06 Click
18complement(446624..447277) PHAGE_Mycoba_BPs: integrase; PP_00401; phage(gi189043119) 8e-46 Click

Region 2, total : 22 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1852437..852448 attL    CACCGGCGCTTT 0.0 Click
2859158..859592 PHAGE_Clostr_st: putative IS transposase (OrfA); PP_00727; phage(gi80159862) 2e-17 Click
3859585..860931 PHAGE_Microc_LMM01: transposase; PP_00728; phage(gi117530306) 1e-41 Click
4complement(860928..861524) hypothetical; PP_00729 0.0 Click
5complement(861517..861837) Ig domain-containing protein [Pseudomonas putida S16] gi|339487395|ref|YP_004701923.1|; PP_00730 4e-05 Click
6complement(861972..862577) PHAGE_Strept_VWB: ORFp27; PP_00731; phage(gi41057260) 7e-11 Click
7complement(862574..862942) hypothetical protein Blon_1820 [Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222] gi|213692687|ref|YP_002323273.1|; PP_00732 3e-43 Click
8complement(862942..863208) hypothetical protein Blon_1819 [Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222] gi|213692686|ref|YP_002323272.1|; PP_00733 1e-09 Click
9complement(863212..863535) hypothetical protein Blon_1818 [Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222] gi|213692685|ref|YP_002323271.1|; PP_00734 4e-28 Click
10complement(863547..863954) hypothetical protein Blon_1817 [Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222] gi|213692684|ref|YP_002323270.1|; PP_00735 1e-16 Click
11complement(863971..864102) hypothetical; PP_00736 0.0 Click
12complement(864095..864259) PHAGE_Lister_A006: Tsh; PP_00737; phage(gi157325426) 6e-06 Click
13complement(864256..865203) PHAGE_Mycoba_TM4: major capsid subunit gp9; PP_00738; phage(gi18496895) 6e-38 Click
14complement(865229..865717) PHAGE_Mycoba_Ramsey: gp6; PP_00739; phage(gi206600187) 7e-08 Click
15complement(865787..866488) PHAGE_Mycoba_Ramsey: gp5; PP_00740; phage(gi206600186) 4e-10 Click
16complement(866502..868037) PHAGE_Mycoba_BPs: portal protein; PP_00741; phage(gi189043090) 3e-53 Click
17complement(868037..869449) PHAGE_Propio_P14.4: terminase large subunit; PP_00742; phage(gi410491226) 5e-91 Click
18complement(869472..869846) PHAGE_Strept_VWB: hypothetical protein VWBp32; PP_00743; phage(gi41057248) 4e-09 Click
19complement(870115..870276) hypothetical; PP_00745 0.0 Click
20870329..870478 hypothetical; PP_00744 0.0 Click
21complement(870667..871284) hypothetical protein Amir_3266 [Actinosynnema mirum DSM 43827] gi|256377359|ref|YP_003101019.1|; PP_00746 6e-13 Click
22complement(871274..871966) hypothetical protein Srot_2112 [Segniliparus rotundus DSM 44985] gi|296394513|ref|YP_003659397.1|; PP_00747 5e-64 Click
23complement(871963..872226) PHAGE_Strept_VWB: hypothetical protein VWBp30; PP_00748; phage(gi41057246) 7e-08 Click
24873732..873743 attR    CACCGGCGCTTT 0.0 Click

Region 3, total : 20 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1complement(1849515..1850381) PHAGE_Roseob_SIO1: gp7; PP_01671; phage(gi9964615) 2e-08 Click
2complement(1850535..1851173) hypothetical protein BLIF_0815 [Bifidobacterium longum subsp. infantis 157F] gi|322689002|ref|YP_004208736.1|; PP_01672 1e-41 Click
3complement(1851161..1852030) hypothetical protein BLIF_1073 [Bifidobacterium longum subsp. infantis 157F] gi|322689259|ref|YP_004208993.1|; PP_01673 5e-48 Click
4complement(1852046..1855636) PHAGE_Microb_Min1: probable tape-measure protein; PP_01674; phage(gi149882831) 1e-76 Click
5complement(1855667..1855819) hypothetical; PP_01675 0.0 Click
6complement(1855963..1856400) PHAGE_Microb_Min1: ATP-dependent serine Clp protease; PP_01676; phage(gi149882829) 4e-08 Click
7complement(1856479..1857066) PHAGE_Microb_Min1: hypothetical protein MPMin1_gp47; PP_01677; phage(gi149882828) 1e-26 Click
8complement(1857137..1857553) PHAGE_Microb_Min1: hypothetical protein MPMin1_gp46; PP_01679; phage(gi149882827) 2e-16 Click
9complement(1857550..1857840) PHAGE_Microb_Min1: hypothetical protein MPMin1_gp45; PP_01678; phage(gi149882826) 5e-20 Click
10complement(1857844..1858227) PHAGE_Microb_Min1: hypothetical protein MPMin1_gp44; PP_01680; phage(gi149882825) 5e-19 Click
11complement(1858224..1858715) PHAGE_Nocard_NBR1: hypothetical protein; PP_01681; phage(gi372217596) 1e-06 Click
12complement(1858912..1860120) PHAGE_Coryne_BFK20: gp6, major capsid protein; PP_01682; phage(gi157168379) 9e-65 Click
13complement(1860133..1860876) PHAGE_Coryne_BFK20: gp5, head maturation protease; PP_01683; phage(gi157168378) 9e-26 Click
14complement(1860866..1862275) PHAGE_Nocard_NBR1: portal protein; PP_01684; phage(gi372217591) 7e-29 Click
15complement(1862302..1863915) PHAGE_Microb_Min1: probable terminase; PP_01685; phage(gi149882818) 1e-96 Click
16complement(1863929..1864291) PHAGE_Microb_Min1: hypothetical protein MPMin1_gp36; PP_01686; phage(gi149882817) 7e-11 Click
17complement(1864384..1864647) hypothetical; PP_01687 0.0 Click
181865061..1865174 hypothetical; PP_01688 0.0 Click
191865230..1865406 hypothetical; PP_01689 0.0 Click
201865396..1865599 PHAGE_Mycoba_Rosebush: gp43; PP_01690; phage(gi29566236) 2e-12 Click