Enterococcus faecium E980 , whole genome shotgun [asmbl_id: NC_000000].2792626, GC%: 38.08%



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            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 42 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1610242..610253 attL    CTGCTACTGGAG 0.0 Click
2complement(610527..611666) PHAGE_Entero_phiEf11: phage integrase protein; EfmE980_0646; phage(gi282598730) 5e-75 Click
3complement(611774..611899) hypothetical protein; EfmE980_0647 0.0 Click
4complement(612166..612588) PHAGE_Lactoc_bIL285: Orf3; EfmE980_0648; phage(gi13095683) 5e-08 Click
5complement(612606..612926) PHAGE_Lactoc_bIL312: repressor; EfmE980_0649; phage(gi13095896) 2e-14 Click
6complement(613924..614811) hypothetical protein; EfmE980_0650 0.0 Click
7complement(614769..615746) hypothetical protein; EfmE980_0651 0.0 Click
8complement(616002..617021) PHAGE_Entero_1: amidase; EfmE980_0652; phage(gi225626379) 3e-56 Click
9complement(617032..617229) PHAGE_Entero_phiEf11: phage holin; EfmE980_0653; phage(gi282598749) 6e-26 Click
10complement(617244..617486) PHAGE_Entero_phiFL2A: holin; EfmE980_0654; phage(gi281416549) 2e-24 Click
11complement(617521..617658) conserved hypothetical protein; EfmE980_0655 0.0 Click
12complement(617660..618106) conserved hypothetical protein; EfmE980_0656 0.0 Click
13complement(618103..618252) hypothetical protein; EfmE980_0657 0.0 Click
14complement(618269..620317) PHAGE_Lactob_1: minor tail protein; EfmE980_0658; phage(gi62327113) 6e-06 Click
15complement(620335..621159) PHAGE_Leucon_Lmd1: putative receptor binding protein; EfmE980_0659; phage(gi399528558) 4e-07 Click
16complement(621163..622212) PHAGE_Lister_P35: gp16; EfmE980_0660; phage(gi157325381) 8e-29 Click
17complement(622209..623081) PHAGE_Lister_P40: gp15; EfmE980_0661; phage(gi207270789) 4e-09 Click
18complement(623082..626936) PHAGE_Entero_1: type measure protein; EfmE980_0662; phage(gi225626385) 6e-81 Click
19complement(626936..627127) hypothetical protein; EfmE980_0663 0.0 Click
20complement(627151..627462) PHAGE_Entero_1: hypothetical protein EFAP1_gp09; EfmE980_0664; phage(gi225626386) 2e-17 Click
21complement(627587..628147) PHAGE_Entero_1: major tail protein; EfmE980_0665; phage(gi225626387) 6e-43 Click
22complement(628163..628534) PHAGE_Entero_1: head-tail joining protein; EfmE980_0666; phage(gi225626388) 1e-22 Click
23complement(628531..628926) PHAGE_Entero_1: head-tail joining protein; EfmE980_0667; phage(gi225626389) 3e-24 Click
24complement(628923..629258) PHAGE_Entero_1: head-tail adaptor protein; EfmE980_0668; phage(gi225626390) 3e-17 Click
25complement(629262..629588) PHAGE_Lactob_Sha1: phage protein DNA packaging protein; EfmE980_0669; phage(gi418489807) 3e-07 Click
26complement(629603..630796) PHAGE_Lactob_Sha1: HK97 family phage major capsid protein; EfmE980_0670; phage(gi418489806) 4e-119 Click
27complement(630793..631470) PHAGE_Lactob_Sha1: protease subunit of ATP-dependent Clp protease; EfmE980_0671; phage(gi418489805) 7e-53 Click
28complement(631505..632725) PHAGE_Staphy_phi7401PVL: portal protein; EfmE980_0672; phage(gi448244665) 1e-59 Click
29complement(632741..634531) PHAGE_Lactob_JCL1032: putative terminase large subunit; EfmE980_0673; phage(gi418489114) 0.0 Click
30complement(634518..635039) PHAGE_Bacill_BtCS33: phage terminase small subunit, P27 family; EfmE980_0674; phage(gi392972711) 1e-21 Click
31635141..635305 PHAGE_Entero_P22: hypothetical protein P22gp16; EfmE980_0675; phage(gi9635553) 2e-05 Click
32complement(635780..636313) PHAGE_Lactob_A2: hypothetical protein A2p62; EfmE980_0676; phage(gi22296581) 5e-05 Click
33complement(636547..636759) PHAGE_Entero_phiFL2A: hypothetical protein; EfmE980_0677; phage(gi281416527) 2e-11 Click
34complement(637334..637507) hypothetical protein; EfmE980_0678 0.0 Click
35637384..637395 attR    CTGCTACTGGAG 0.0 Click
36complement(637765..638178) PHAGE_Entero_phiEf11: phage autolysin transcriptional regulator ArpU family; EfmE980_0679; phage(gi282598742) 3e-59 Click
37complement(638255..638551) ArpT; EfmE980_0680 0.0 Click
38complement(638551..638745) hypothetical protein; EfmE980_0681 0.0 Click
39complement(638748..639053) PHAGE_Entero_phiFL1A: hypothetical protein; EfmE980_0682; phage(gi281416350) 3e-06 Click
40complement(639068..639469) PHAGE_Lister_2389: Gp35 protein; EfmE980_0683; phage(gi17488540) 2e-19 Click
41complement(639469..639840) PHAGE_Lactoc_Tuc2009: hypothetical protein Tuc2009_21; EfmE980_0684; phage(gi13487822) 5e-12 Click
42complement(639837..640187) hypothetical protein; EfmE980_0685 0.0 Click
43complement(640184..640501) PHAGE_Lactoc_T: hypothetical protein BK5-Tp56; EfmE980_0686; phage(gi14251179) 2e-16 Click
44complement(640501..640791) PHAGE_Entero_phiFL3A: hypothetical protein; EfmE980_0687; phage(gi281416234) 1e-16 Click

Region 2, total : 34 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
11846681..1846693 attL    AAAATTACAACAA 0.0 Click
2complement(1852868..1854085) PROPHAGE_Escher_MG1655: IS150 transposase B; EfmE980_1879; phage(gi16131429) 6e-32 Click
31854434..1856272 putative transcription antiterminator; EfmE980_1880 0.0 Click
41856281..1856913 PHAGE_Parame_FR483: hypothetical protein FR483_N177L; EfmE980_1881; phage(gi155370275) 8e-11 Click
51856958..1856971 attL    TTGTTGCAAAGCAA 0.0 Click
61857277..1857290 attL    ATTTGTCAAAAAAA 0.0 Click
71857308..1858123 D-methionine-binding lipoprotein MetQ; EfmE980_1882 0.0 Click
81858146..1858652 methionine-S-sulfoxide reductase; EfmE980_1883 0.0 Click
91858991..1859170 conserved hypothetical protein; EfmE980_1884 0.0 Click
10complement(1859287..1859712) catabolite gene activator, putative; EfmE980_1885 0.0 Click
111859904..1860059 hypothetical protein; EfmE980_1886 0.0 Click
121860367..1861113 PHAGE_Staphy_phiMR25: putative anti-repressor protein; EfmE980_1887; phage(gi189427129) 3e-52 Click
131861128..1861331 phage antirepressor; EfmE980_1888 0.0 Click
141861346..1861645 PHAGE_Lactoc_bIL312: excisionase; EfmE980_1889; phage(gi13095898) 6e-09 Click
151861693..1861977 Xis; EfmE980_1890 0.0 Click
161861998..1862186 PHAGE_Entero_phiFL3A: hypothetical protein; EfmE980_1891; phage(gi281416222) 9e-11 Click
171862183..1862356 hypothetical protein; EfmE980_1892 0.0 Click
181862325..1862453 hypothetical protein; EfmE980_1893 0.0 Click
191862509..1862850 hypothetical protein; EfmE980_1894 0.0 Click
201862843..1863589 PHAGE_Lactoc_bIL285: Orf14; EfmE980_1895; phage(gi13095694) 8e-43 Click
211863595..1864281 PHAGE_Entero_phiEf11: conserved hypothetical protein; EfmE980_1896; phage(gi282598737) 5e-90 Click
221864284..1864511 conserved hypothetical protein; EfmE980_1897 0.0 Click
231864514..1865260 PHAGE_Lactob_LF1: DNA replication protein; EfmE980_1898; phage(gi418489431) 6e-40 Click
241866369..1866791 PHAGE_Bacill_WBeta: putative mannose 6-phosphate isomerase; EfmE980_1900; phage(gi85701420) 8e-40 Click
251866875..1867528 PHAGE_Plankt_PaV_LD: ABC transporter; EfmE980_1901; phage(gi371496158) 1e-26 Click
261867525..1868289 hypothetical protein; EfmE980_1902 0.0 Click
271868364..1868477 site-specific recombinase, resolvase family; EfmE980_1903 0.0 Click
281868691..1868910 hypothetical protein; EfmE980_1904 0.0 Click
291868974..1869264 PHAGE_Lactob_phiAT3: putative transposase A; EfmE980_1905; phage(gi48697273) 3e-07 Click
301869300..1870136 PHAGE_Lactob_phiAT3: putative transposase B; EfmE980_1906; phage(gi48697274) 8e-32 Click
311870237..1870250 attR    ATTTGTCAAAAAAA 0.0 Click
32complement(1870271..1871257) conserved protein; EfmE980_1907 0.0 Click
33complement(1871499..1871876) conserved hypothetical protein; EfmE980_1908 0.0 Click
34complement(1871893..1872819) PHAGE_Bacill_SPO1: gp2.43; EfmE980_1909; phage(gi209972888) 3e-16 Click
35complement(1872832..1873863) glycosyltransferase involved in cell wall biogenesis; EfmE980_1910 0.0 Click
361874075..1875106 site-specific recombinase, phage integrase family protein; EfmE980_1911 0.0 Click
371875210..1876742 AMP-binding family protein; EfmE980_1912 0.0 Click
381876767..1876840 tRNA 0.0 Click
391876843..1876916 tRNA 0.0 Click
401876923..1877005 tRNA 0.0 Click
411877022..1877095 tRNA 0.0 Click
421877106..1877178 tRNA 0.0 Click
431877194..1877280 tRNA 0.0 Click
441877291..1877365 tRNA 0.0 Click
451877374..1877448 tRNA 0.0 Click
461877450..1878020 PHAGE_Salisa_1: hypothetical protein; EfmE980_1914; phage(gi388570712) 3e-12 Click
471887481..1887494 attR    TTGTTGCAAAGCAA 0.0 Click
481887634..1887646 attR    AAAATTACAACAA 0.0 Click

Region 3, total : 47 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
12264892..2265422 PROPHAGE_Escher_CFT073: transposase; EfmE980_2314; phage(gi26246249) 4e-25 Click
22265458..2265760 hypothetical protein; EfmE980_2315 0.0 Click
32265757..2265918 hypothetical protein; EfmE980_2316 0.0 Click
42265921..2266223 hypothetical protein; EfmE980_2317 0.0 Click
52266220..2266438 hypothetical protein; EfmE980_2318 0.0 Click
62266435..2266860 PHAGE_Staphy_Twort: ORF085; EfmE980_2319; phage(gi66391338) 2e-13 Click
72267006..2267686 PHAGE_Entero_phiEF24C: hypothetical protein EFP_gp160; EfmE980_2320; phage(gi158079456) 6e-16 Click
82267688..2267885 PHAGE_Lister_P40: gp42; EfmE980_2321; phage(gi207270816) 2e-05 Click
92267897..2268055 hypothetical protein; EfmE980_2322 0.0 Click
102268056..2268274 ArpS; EfmE980_2323 0.0 Click
112268274..2268504 3-deoxy-7-phosphoheptulonate synthase; EfmE980_2324 0.0 Click
122268511..2268705 hypothetical protein; EfmE980_2325 0.0 Click
132268908..2269201 ArpT; EfmE980_2326 0.0 Click
142269270..2269671 PHAGE_Entero_phiEf11: phage autolysin transcriptional regulator ArpU family; EfmE980_2327; phage(gi282598742) 3e-22 Click
152269745..2270212 PHAGE_Brocho_NF5: gp53; EfmE980_2328; phage(gi327197638) 5e-10 Click
16complement(2270492..2270698) PHAGE_Staphy_CNPH82: hypothetical protein cn37; EfmE980_2329; phage(gi119953715) 3e-15 Click
172271267..2271479 PHAGE_Entero_phiFL2A: hypothetical protein; EfmE980_2330; phage(gi281416527) 7e-11 Click
182271737..2272270 PHAGE_Lactob_phig1e: putative terminase small subunit; EfmE980_2331; phage(gi23455798) 5e-20 Click
192272257..2273501 PHAGE_Entero_phiFL1A: terminase large subunit; EfmE980_2332; phage(gi281416362) 0.0 Click
202273514..2275013 PHAGE_Staphy_phiNM: phage portal protein; EfmE980_2333; phage(gi118430763) 1e-105 Click
212275018..2275944 PHAGE_Entero_phiEf11: phage Mu protein F-like protein; EfmE980_2334; phage(gi282598757) 6e-78 Click
222276071..2276673 PHAGE_Entero_phiEf11: putative phage scaffold protein; EfmE980_2335; phage(gi282598711) 7e-33 Click
232276686..2277612 PHAGE_Staphy_phiNM: head protein; EfmE980_2336; phage(gi118430767) 4e-90 Click
242277729..2277890 PHAGE_Entero_phiEf11: putative phage major tail protein; EfmE980_2337; phage(gi282598736) 4e-12 Click
252278122..2278235 PHAGE_Entero_phiEf11: conserved hypothetical protein; EfmE980_2338; phage(gi282598735) 1e-05 Click
262278232..2278558 PHAGE_Entero_phiEf11: conserved hypothetical protein; EfmE980_2339; phage(gi282598747) 4e-39 Click
272278542..2278880 PHAGE_Entero_phiEf11: phage protein HK97; EfmE980_2340; phage(gi282598738) 6e-17 Click
282278880..2279272 PHAGE_Entero_phiEf11: putative major structural protein; EfmE980_2341; phage(gi282598740) 8e-49 Click
292279283..2279795 PHAGE_Entero_phiEf11: phage major tail protein; EfmE980_2342; phage(gi282598708) 5e-55 Click
302279841..2280209 PHAGE_Entero_phiEf11: putative phage protein; EfmE980_2343; phage(gi282598743) 2e-23 Click
312280257..2280550 PHAGE_Entero_phiEf11: putative phage protein; EfmE980_2344; phage(gi282598753) 2e-12 Click
322280567..2283389 PHAGE_Lactoc_1: TMP; EfmE980_2345; phage(gi13786576) 0.0 Click
332283404..2284189 PHAGE_Entero_phiEf11: putative phage tail protein; EfmE980_2346; phage(gi282598752) 5e-25 Click
342284189..2287077 PHAGE_Brocho_NF5: gp16; EfmE980_2347; phage(gi327197601) 0.0 Click
352287088..2287606 PHAGE_Strept_O1205: putative tail protein; EfmE980_2348; phage(gi23455889) 3e-16 Click
362287572..2288480 PHAGE_Lactoc_bIL285: Orf55; EfmE980_2349; phage(gi13095735) 7e-16 Click
372288480..2289268 PHAGE_Ralsto_RSL1: unnamed protein product; EfmE980_2350; phage(gi189426968) 5e-09 Click
382289273..2289641 PHAGE_Gordon_GTE2: tail fiber protein; EfmE980_2351; phage(gi338826880) 9e-08 Click
392289641..2290135 conserved hypothetical protein; EfmE980_2352 0.0 Click
402290149..2290496 PHAGE_Bacill_phi105: hypothetical protein phi105_23; EfmE980_2353; phage(gi22855016) 6e-07 Click
412290489..2290629 PHAGE_Staphy_IPLA88: hypothetical protein SauSIPLA88_gp56; EfmE980_2354; phage(gi215401226) 2e-06 Click
422290863..2291381 hypothetical protein; EfmE980_2355 0.0 Click
432291439..2291657 PHAGE_Entero_phiEf11: conserved hypothetical protein; EfmE980_2356; phage(gi282598731) 6e-18 Click
442291658..2291855 PHAGE_Entero_phiEf11: phage holin; EfmE980_2357; phage(gi282598749) 4e-25 Click
452291866..2292876 PHAGE_Lactob_A2: lysin; EfmE980_2358; phage(gi22296540) 1e-60 Click
46complement(2292931..2293935) PHAGE_Clostr_phiC2: putative abortive infection bacteriophage resistance protein ORF 37; EfmE980_2359; phage(gi134287370) 1e-09 Click
472294541..2294738 PHAGE_Lactoc_bIL312: Csp; EfmE980_2360; phage(gi13095918) 2e-25 Click