Carnobacterium sp. AT7 1101238000986, whole genome shotgun [asmbl_id: NC_000000].2442118, GC%: 35.28%



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            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 45 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1874594..874605 attL    AAAAATTAACCC 0.0 Click
2complement(879813..884120) PHAGE_Strept_pyogenes_315_3: putative platelet-binding protein; CAT7_04874; phage(gi28876272) 5e-22 Click
3complement(884121..884831) PHAGE_Strept_pyogenes_315_3: hypothetical protein SpyM3_1103; CAT7_04879; phage(gi28876273) 1e-12 Click
4complement(884818..889119) PHAGE_Lactob_LF1: phage tail tape measure protein; CAT7_04884; phage(gi418489397) 9e-117 Click
5complement(889156..889296) hypothetical protein; CAT7_04889 0.0 Click
6complement(889347..889685) hypothetical protein; CAT7_04894 0.0 Click
7complement(889704..890360) PHAGE_Bacill_phBC6A52: hypothetical protein BC2592; CAT7_04899; phage(gi31415857) 5e-06 Click
8complement(890367..890804) PHAGE_Clostr_phiCD6356: putative head-tail joining protein; CAT7_04904; phage(gi326536856) 7e-06 Click
9complement(890804..891139) hypothetical protein; CAT7_04909 0.0 Click
10complement(891139..891492) hypothetical protein; CAT7_04914 0.0 Click
11complement(891470..891757) PHAGE_Lister_B025: gp7; CAT7_04919; phage(gi157325224) 9e-09 Click
12complement(891772..891957) hypothetical protein; CAT7_04924 0.0 Click
13complement(891984..893183) PHAGE_Staphy_phi5967PVL: phage major capsid protein; CAT7_04929; phage(gi431810272) 8e-50 Click
14complement(893185..893925) PHAGE_Staphy_2638A: ORF013; CAT7_04934; phage(gi66395463) 1e-41 Click
15complement(893912..895039) PHAGE_Staphy_phi5967PVL: phage portal protein; CAT7_04939; phage(gi431810270) 1e-29 Click
16complement(895069..895215) hypothetical protein; CAT7_04944 0.0 Click
17complement(895232..896890) PHAGE_Staphy_phi5967PVL: phage terminase large subunit; CAT7_04949; phage(gi431810269) 2e-136 Click
18complement(896891..897211) PHAGE_Lister_B025: gp1; CAT7_04954; phage(gi157325218) 1e-16 Click
19complement(897348..897674) PHAGE_Lister_B025: gp65; CAT7_04959; phage(gi157325282) 2e-12 Click
20897774..898328 hypothetical protein; CAT7_04964 0.0 Click
21complement(898470..898958) PHAGE_Bacill_WBeta: conserved phage protein; CAT7_04969; phage(gi85701424) 1e-30 Click
22complement(898980..899444) PHAGE_Staphy_phi5967PVL: ssDNA-binding protein; CAT7_04974; phage(gi431810257) 8e-32 Click
23complement(899441..899731) hypothetical protein; CAT7_04979 0.0 Click
24complement(899728..900456) hypothetical protein; CAT7_04984 0.0 Click
25complement(900453..900737) hypothetical protein; CAT7_04989 0.0 Click
26complement(900734..901066) hypothetical protein; CAT7_04994 0.0 Click
27complement(901063..901269) PHAGE_Clostr_PhiS63: gp39; CAT7_04999; phage(gi388570665) 8e-05 Click
28complement(901266..901808) PHAGE_Lister_B054: gp58; CAT7_05004; phage(gi157325342) 5e-13 Click
29complement(901810..902256) PHAGE_Lister_A118: putative methyltransferase; CAT7_05009; phage(gi16798837) 8e-48 Click
30902325..902948 hypothetical protein; CAT7_05014 0.0 Click
31complement(902952..903389) PHAGE_Phage_OH2: endodeoxyribonuclease RusA; CAT7_05019; phage(gi526118343) 1e-41 Click
32complement(903395..904309) PHAGE_Lactob_Lrm1: DNA replication protein; CAT7_05024; phage(gi195661236) 3e-78 Click
33complement(904325..905029) PHAGE_Lister_B054: gp51; CAT7_05029; phage(gi157325335) 4e-63 Click
34complement(905026..906102) hypothetical protein; CAT7_05034 0.0 Click
35906166..906765 hypothetical protein; CAT7_05039 0.0 Click
36complement(906824..908770) PHAGE_Brocho_NF5: gp34; CAT7_05044; phage(gi327197619) 1e-112 Click
37complement(908846..909058) hypothetical protein; CAT7_05049 0.0 Click
38complement(909074..909232) hypothetical protein; CAT7_05054 0.0 Click
39complement(909223..909390) hypothetical protein; CAT7_05059 0.0 Click
40complement(909404..909595) hypothetical protein; CAT7_05064 0.0 Click
41complement(909601..909702) hypothetical protein; CAT7_05069 0.0 Click
42909874..910194 PHAGE_Entero_phiFL3A: CI phage repressor protein; CAT7_05074; phage(gi281416216) 7e-20 Click
43910205..910549 PHAGE_Entero_phiFL3A: hypothetical protein; CAT7_05079; phage(gi281416215) 2e-23 Click
44910640..911155 hypothetical protein; CAT7_05084 0.0 Click
45911188..911379 hypothetical protein; CAT7_05089 0.0 Click
46911425..911436 attR    AAAAATTAACCC 0.0 Click
47911491..912924 PHAGE_Lister_A118: putative integrase; bacteriophage; phage 370.1; CAT7_05094(gi16798814) 8e-63 Click

Region 2, total : 36 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1911448..911466 attL    CTCTTTTCTATGCCCTATT 0.0 Click
2complement(923074..923877) PHAGE_Plankt_PaV_LD: ABC transporter; CAT7_05144; phage(gi371496158) 1e-16 Click
3complement(923874..924773) ABC transporter, permease protein; CAT7_05149 0.0 Click
4complement(924800..925789) ABC transporter, substrate-binding protein; CAT7_05154 0.0 Click
5926365..929301 PHAGE_Clostr_phiCD27: hypothetical protein phiCD27_gp17; CAT7_05159; phage(gi209901254) 6e-11 Click
6complement(929410..930104) PHAGE_Staphy_prophage_phiPV83: transposase; CAT7_05164; phage(gi9635722) 2e-49 Click
7complement(930146..930526) PHAGE_Bacill_phBC6A52: endonuclease; CAT7_07493; phage(gi31415846) 2e-48 Click
8complement(930513..930818) PHAGE_Bacill_phBC6A52: hypothetical protein BC2580; CAT7_07498; phage(gi31415845) 7e-19 Click
9complement(930946..931383) PHAGE_Bacill_WBeta: conserved phage protein; CAT7_07503; phage(gi85701424) 3e-30 Click
10complement(931405..931869) PHAGE_Staphy_phi5967PVL: ssDNA-binding protein; CAT7_07508; phage(gi431810257) 2e-32 Click
11complement(931866..932273) hypothetical protein; CAT7_07513 0.0 Click
12complement(932266..932733) PHAGE_Lister_B025: gp45; CAT7_07518; phage(gi157325262) 3e-05 Click
13complement(932730..932960) hypothetical protein; CAT7_07523 0.0 Click
14complement(932953..933111) hypothetical protein; CAT7_07528 0.0 Click
15complement(933090..933440) hypothetical protein; CAT7_07533 0.0 Click
16complement(933437..933643) PHAGE_Clostr_PhiS63: gp39; CAT7_07538; phage(gi388570665) 8e-05 Click
17complement(933640..934182) PHAGE_Lister_B054: gp58; CAT7_07543; phage(gi157325342) 8e-12 Click
18934619..934927 PHAGE_Strept_PH15: hypothetical protein phiPH15_gp07; CAT7_07548; phage(gi190151422) 4e-28 Click
19complement(934919..935356) PHAGE_Phage_OH2: endodeoxyribonuclease RusA; CAT7_07553; phage(gi526118343) 5e-41 Click
20complement(935346..935537) hypothetical protein; CAT7_07558 0.0 Click
21complement(935549..936367) PHAGE_Lactob_phig1e: zinc finger protein; CAT7_07563; phage(gi23455786) 1e-48 Click
22complement(936348..937076) PHAGE_Lactob_Lc_Nu: putative replication protein; CAT7_07568; phage(gi78000008) 5e-45 Click
23complement(937092..937796) PHAGE_Lister_B054: gp51; CAT7_07573; phage(gi157325335) 2e-62 Click
24complement(937793..938686) PHAGE_Staphy_phiN315: hypothetical protein SA1794; CAT7_07578; phage(gi30043972) 7e-75 Click
25complement(938688..938879) PHAGE_Lactoc_bIL285: Orf31; CAT7_07583; phage(gi13095711) 1e-06 Click
26complement(938879..940822) PHAGE_Brocho_NF5: gp34; CAT7_07588; phage(gi327197619) 7e-114 Click
27complement(940898..941110) hypothetical protein; CAT7_07593 0.0 Click
28complement(941289..941549) PHAGE_Lactoc_bIL312: excisionase; CAT7_07598; phage(gi13095898) 2e-09 Click
29complement(941553..942314) PHAGE_Lister_B054: gp72; CAT7_07603; phage(gi157325355) 6e-60 Click
30complement(942327..942509) PHAGE_Bacill_BCJA1c: cro; CAT7_07608; phage(gi56694875) 2e-13 Click
31942787..943107 PHAGE_Lactoc_bIL312: repressor; CAT7_07613; phage(gi13095896) 3e-21 Click
32943118..943462 PHAGE_Entero_phiFL3A: hypothetical protein; CAT7_07618; phage(gi281416215) 2e-21 Click
33943595..944068 PHAGE_Strept_PH10: hypothetical protein PH10_gp02; CAT7_07623; phage(gi238821319) 5e-16 Click
34944098..944289 PHAGE_Entero_phiEf11: conserved hypothetical protein; CAT7_07628; phage(gi282598725) 2e-24 Click
35944359..944377 attR    CTCTTTTCTATGCCCTATT 0.0 Click
36944404..945552 PHAGE_Lactoc_bIL312: integrase; CAT7_07633; phage(gi13095892) 5e-71 Click
37complement(945608..947362) comEC/Rec2 family protein; CAT7_07638 0.0 Click
38complement(947398..947913) PHAGE_Bacill_0305phi8_36: deoxycytidylate deaminase; CAT7_07643; phage(gi156564196) 5e-35 Click

Region 3, total : 21 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1complement(2177296..2178234) PHAGE_Bacill_phi105: hypothetical protein phi105_26; CAT7_07393; phage(gi22855019) 2e-27 Click
2complement(2178235..2178597) PHAGE_Lactoc_949: putative phage holin; CAT7_07398; phage(gi327197967) 1e-12 Click
3complement(2178607..2178981) PHAGE_Lactoc_P335_sensu_lato: hypothetical protein P335p47; CAT7_07403; phage(gi30089908) 1e-05 Click
42179188..2180462 hypothetical protein; CAT7_07408 0.0 Click
5complement(2180502..2182550) PHAGE_Lactoc_bIL285: Orf55; CAT7_07413; phage(gi13095735) 4e-31 Click
6complement(2182572..2185328) PHAGE_Brocho_NF5: gp16; CAT7_07418; phage(gi327197601) 7e-96 Click
7complement(2185325..2186047) PHAGE_Clostr_phi3626: Gp14 protein; CAT7_07423; phage(gi20065977) 3e-06 Click
8complement(2186044..2188359) PHAGE_Lister_2389: tail tape measure protein; CAT7_07428; phage(gi17488515) 1e-102 Click
9complement(2188373..2188537) hypothetical protein; CAT7_07433 0.0 Click
10complement(2188564..2189007) PHAGE_Bacill_phBC6A52: hypothetical protein BC2593; CAT7_07438; phage(gi31415858) 1e-22 Click
11complement(2189000..2189614) PHAGE_Bacill_phBC6A52: hypothetical protein BC2592; CAT7_07443; phage(gi31415857) 5e-19 Click
12complement(2189614..2189976) PHAGE_Bacill_phBC6A52: hypothetical protein BC2591; CAT7_07448; phage(gi31415856) 6e-21 Click
13complement(2189966..2190304) PHAGE_Bacill_phBC6A52: hypothetical protein BC2590; CAT7_07453; phage(gi31415855) 6e-24 Click
14complement(2190294..2190626) PHAGE_Bacill_phBC6A52: hypothetical protein BC2589; CAT7_07458; phage(gi31415854) 2e-43 Click
15complement(2190607..2190876) PHAGE_Bacill_phBC6A52: hypothetical protein BC2588; CAT7_07463; phage(gi31415853) 5e-22 Click
16complement(2190883..2192280) PHAGE_Bacill_phBC6A52: prohead protease; CAT7_07468; phage(gi31415852) 2e-109 Click
17complement(2192282..2192860) PHAGE_Clostr_phi3626: putative prohead protease; CAT7_07473; phage(gi20065968) 2e-31 Click
18complement(2192832..2194040) PHAGE_Bacill_phBC6A52: Portal protein; CAT7_07478; phage(gi31415850) 2e-159 Click
19complement(2194064..2195785) PHAGE_Bacill_phBC6A52: Terminase large subunit; CAT7_07483; phage(gi31415848) 0.0 Click
20complement(2195782..2196253) PHAGE_Bacill_phBC6A52: Terminase small subunit; CAT7_07488; phage(gi31415847) 1e-29 Click
21complement(2196254..2197550) PHAGE_Uganda_virus: polyprotein; CAT7_03634; phage(gi314998982) 9e-08 Click