Streptococcus pneumoniae SP3-BS71 whole genome shotgun [asmbl_id: NC_000000].2032681, GC%: 39.76%



Text file for download

            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 32 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
11505738..1507024 PHAGE_Megavi_lba: adenylosuccinate synthetase; CGSSp3BS71_07926; phage(gi448826112) 3e-72 Click
21507226..1507693 PHAGE_Microm_MpV1: hypothetical protein; CGSSp3BS71_07931; phage(gi313768407) 2e-07 Click
31507879..1508322 PHAGE_Lactoc_phiLC3: dUTPase; CGSSp3BS71_07936; phage(gi45597408) 2e-28 Click
41508282..1508839 deoxyuridine 5'-triphosphate nucleotidohydrolase; CGSSp3BS71_07941 0.0 Click
5complement(1508383..1508502) hypothetical protein; CGSSp3BS71_07946 0.0 Click
61508952..1510214 PHAGE_Bacill_W.Ph.: gp46; CGSSp3BS71_07951; phage(gi371671106) 1e-06 Click
71510287..1510784 hypothetical protein; CGSSp3BS71_07956 0.0 Click
81510809..1511093 hypothetical protein; CGSSp3BS71_07961 0.0 Click
91511163..1511639 predicted repair protein; CGSSp3BS71_07966 0.0 Click
101511784..1512752 PHAGE_Salmon_7_11: putative ribose-phosphate pyrophosphokinase; CGSSp3BS71_07971; phage(gi345461227) 1e-19 Click
11complement(1512688..1513167) PROPHAGE_Staphy_N315: transposase; CGSSp3BS71_07976; phage(gi15927655) 1e-05 Click
12complement(1513211..1513462) hypothetical protein; CGSSp3BS71_07981 0.0 Click
13complement(1513420..1513746) competence-induced protein Ccs16; CGSSp3BS71_07986 0.0 Click
14complement(1513786..1514100) ribose-phosphate pyrophosphokinase; CGSSp3BS71_07996 0.0 Click
151513990..1514166 hypothetical protein; CGSSp3BS71_08001 0.0 Click
161514392..1517025 PHAGE_Bacill_SP10: DNA polymerase; CGSSp3BS71_08006; phage(gi418489633) 2e-56 Click
171517110..1517547 hypothetical protein; CGSSp3BS71_08011 0.0 Click
181517534..1517971 hypothetical protein; CGSSp3BS71_08016 0.0 Click
19complement(1518000..1519010) DNA polymerase I; CGSSp3BS71_08021 0.0 Click
201519159..1520328 aromatic amino acid aminotransferase; CGSSp3BS71_08026 0.0 Click
211520325..1521095 DNA repair protein RecO; CGSSp3BS71_08031 0.0 Click
221521092..1522084 fatty acid/phospholipid synthesis protein PlsX; CGSSp3BS71_08036 0.0 Click
231522090..1522323 PHAGE_Cronob_vB_CsaM_GAP32: acyl carrier protein; CGSSp3BS71_08041; phage(gi414087077) 6e-07 Click
241523080..1523220 hypothetical protein; CGSSp3BS71_08046 0.0 Click
251523807..1524229 PHAGE_Bacill_SPBc2: ABC transporter; CGSSp3BS71_08051; phage(gi9630145) 4e-05 Click
261524219..1525961 PHAGE_Bacill_SPBc2: ABC transporter; CGSSp3BS71_08056; phage(gi9630145) 2e-70 Click
271525974..1527323 PHAGE_Pseudo_vB_PaeS_PMG1: major capsid protein; CGSSp3BS71_08061; phage(gi374531651) 4e-05 Click
281527493..1528200 PHAGE_Synech_S_ShM2: phosphoribosylaminoimidazole-succinocarboxamide synthase; CGSSp3BS71_08066; phage(gi326782410) 3e-43 Click
291528402..1532127 PHAGE_Microb_Min1: putative phosphoribosyl formylglycinamidine (FGAM) synthase II; CGSSp3BS71_08071; phage(gi149882852) 8e-41 Click
301532220..1533662 PHAGE_Parame_FR483: hypothetical protein FR483_N035R; CGSSp3BS71_08076; phage(gi155370133) 9e-21 Click
311533699..1534721 PHAGE_Synech_S_SKS1: glycinamide ribonucleotide formyltransferase; CGSSp3BS71_08081; phage(gi472340860) 5e-65 Click
321534718..1535263 PHAGE_Synech_S_SKS1: cyanobacterial phosphoribosylglycinamide formyltransferase; CGSSp3BS71_08086; phage(gi472340960) 9e-26 Click

Region 2, total : 51 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
11953979..1953991 attL    ATATAAAATATAA 0.0 Click
21961675..1963210 PHAGE_Amsact_: putative ATP-binding cassette transporter; CGSSp3BS71_11966; phage(gi9964444) 3e-14 Click
31963203..1964261 sugar ABC transporter, permease protein, putative; CGSSp3BS71_11971 0.0 Click
41964264..1965220 sugar ABC transporter, permease protein, putative; CGSSp3BS71_11976 0.0 Click
51965305..1965517 hypothetical protein; CGSSp3BS71_11981 0.0 Click
61965653..1965820 cytidine deaminase; CGSSp3BS71_11986 0.0 Click
71965820..1966029 PROPHAGE_Escher_MG1655: IS150 transposase B; CGSSp3BS71_11991; phage(gi16131429) 2e-07 Click
8complement(1966127..1967275) PHAGE_Strept_PH10: hypothetical protein PH10_gp01; CGSSp3BS71_04034; phage(gi238821318) 0.0 Click
9complement(1967461..1968384) PHAGE_Staphy_phi2958PVL: hypothetical protein phi2958PVL_gp05; CGSSp3BS71_04039; phage(gi209363557) 1e-51 Click
10complement(1968397..1968780) PHAGE_Strept_PH10: hypothetical protein PH10_gp03; CGSSp3BS71_04044; phage(gi238821320) 8e-25 Click
11complement(1968793..1969158) PHAGE_Strept_PH10: hypothetical protein PH10_gp04; CGSSp3BS71_04049; phage(gi238821321) 8e-28 Click
121969429..1969444 attL    AAAGGAGGTGAGGAAA 0.0 Click
13complement(1969535..1969756) hypothetical protein; CGSSp3BS71_04054 0.0 Click
141969875..1970021 hypothetical protein; CGSSp3BS71_04059 0.0 Click
151970033..1970236 PHAGE_Strept_phi3396: hypothetical protein phi3396_06; CGSSp3BS71_04064; phage(gi126011068) 7e-19 Click
161970253..1970450 PHAGE_Strept_SM1: gp9; CGSSp3BS71_04069; phage(gi32469440) 9e-29 Click
171970461..1970622 hypothetical protein; CGSSp3BS71_04074 0.0 Click
18complement(1970617..1971042) phage protein; CGSSp3BS71_04079 0.0 Click
191971096..1971806 PHAGE_Strept_PH10: hypothetical protein PH10_gp08; CGSSp3BS71_04084; phage(gi238821325) 6e-120 Click
201971820..1972077 PHAGE_Strept_PH10: hypothetical protein PH10_gp09; CGSSp3BS71_04089; phage(gi238821326) 6e-41 Click
211972163..1972483 PHAGE_Strept_1: hypothetical protein EJ-1p17; CGSSp3BS71_04094; phage(gi39653691) 7e-40 Click
221972499..1972795 PHAGE_Strept_SM1: gp18; CGSSp3BS71_04099; phage(gi32469449) 4e-07 Click
231972788..1973594 PHAGE_Strept_SM1: gp19; CGSSp3BS71_04104; phage(gi32469450) 2e-125 Click
241973582..1973740 PHAGE_Strept_SM1: gp20; CGSSp3BS71_04109; phage(gi32469451) 7e-13 Click
251973734..1974504 PHAGE_Strept_SM1: gp21; CGSSp3BS71_04114; phage(gi32469452) 1e-123 Click
261974519..1974713 PHAGE_Strept_PH10: hypothetical protein PH10_gp12; CGSSp3BS71_04119; phage(gi238821329) 9e-19 Click
271974713..1974931 PHAGE_Strept_PH10: hypothetical protein PH10_gp15; CGSSp3BS71_04124; phage(gi238821332) 2e-15 Click
281974931..1975014 hypothetical protein; CGSSp3BS71_04129 0.0 Click
291975256..1975465 PHAGE_Strept_PH10: hypothetical protein PH10_gp20; CGSSp3BS71_04134; phage(gi238821337) 9e-10 Click
301975425..1975592 hypothetical protein; CGSSp3BS71_04139 0.0 Click
311975579..1975788 hypothetical protein; CGSSp3BS71_04144 0.0 Click
321975760..1976077 PHAGE_Strept_MM1: hypothetical protein MM1p22; CGSSp3BS71_04149; phage(gi15088763) 2e-55 Click
331976079..1976189 hypothetical protein; CGSSp3BS71_04154 0.0 Click
341976330..1976731 PHAGE_Strept_PH10: hypothetical protein PH10_gp27; CGSSp3BS71_04159; phage(gi238821344) 6e-68 Click
351976919..1977461 PHAGE_Strept_PH10: hypothetical protein PH10_gp28; CGSSp3BS71_04164; phage(gi238821345) 3e-102 Click
361977838..1978158 PHAGE_Strept_PH10: hypothetical protein PH10_gp30; CGSSp3BS71_04169; phage(gi238821347) 8e-52 Click
371978295..1978687 PHAGE_Strept_PH10: hypothetical protein PH10_gp31; CGSSp3BS71_04174; phage(gi238821348) 5e-67 Click
381978680..1980410 PHAGE_Strept_PH10: hypothetical protein PH10_gp32; CGSSp3BS71_04179; phage(gi238821349) 0.0 Click
391980418..1980636 PHAGE_Strept_PH10: hypothetical protein PH10_gp33; CGSSp3BS71_04184; phage(gi238821350) 5e-29 Click
401980637..1980652 attR    AAAGGAGGTGAGGAAA 0.0 Click
411980654..1981856 PHAGE_Strept_PH10: hypothetical protein PH10_gp34; CGSSp3BS71_04189; phage(gi238821351) 7e-173 Click
421981840..1982415 PHAGE_Strept_PH10: hypothetical protein PH10_gp35; CGSSp3BS71_04194; phage(gi238821352) 9e-93 Click
431982412..1983578 PHAGE_Strept_PH10: hypothetical protein PH10_gp36; CGSSp3BS71_04199; phage(gi238821353) 4e-110 Click
441983590..1983859 PHAGE_Strept_PH10: hypothetical protein PH10_gp37; CGSSp3BS71_04204; phage(gi238821354) 6e-14 Click
451983862..1984143 PHAGE_Strept_PH10: hypothetical protein PH10_gp38; CGSSp3BS71_04209; phage(gi238821355) 2e-34 Click
461984130..1984429 PHAGE_Strept_PH10: hypothetical protein PH10_gp39; CGSSp3BS71_04214; phage(gi238821356) 8e-49 Click
471984426..1984773 PHAGE_Strept_PH10: hypothetical protein PH10_gp40; CGSSp3BS71_04219; phage(gi238821357) 1e-59 Click
481984770..1985093 PHAGE_Strept_PH10: hypothetical protein PH10_gp41; CGSSp3BS71_04224; phage(gi238821358) 4e-52 Click
491985105..1985683 PHAGE_Strept_PH10: hypothetical protein PH10_gp42; CGSSp3BS71_04229; phage(gi238821359) 4e-88 Click
501985695..1986114 PHAGE_Strept_PH10: hypothetical protein PH10_gp43; CGSSp3BS71_04234; phage(gi238821360) 9e-73 Click
511986183..1986278 hypothetical protein; CGSSp3BS71_04239 0.0 Click
521986392..1989487 PHAGE_Strept_PH10: hypothetical protein PH10_gp44; CGSSp3BS71_04244; phage(gi238821361) 0.0 Click
531989484..1990206 PHAGE_Strept_PH10: hypothetical protein PH10_gp45; CGSSp3BS71_04249; phage(gi238821362) 2e-130 Click
541990207..1993053 PHAGE_Strept_PH10: hypothetical protein PH10_gp46; CGSSp3BS71_04254; phage(gi238821363) 0.0 Click
552007180..2007192 attR    ATATAAAATATAA 0.0 Click

Region 3, total : 72 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
11953979..1953991 attL    ATATAAAATATAA 0.0 Click
21961675..1963210 PHAGE_Amsact_: putative ATP-binding cassette transporter; CGSSp3BS71_11966; phage(gi9964444) 3e-14 Click
31963203..1964261 sugar ABC transporter, permease protein, putative; CGSSp3BS71_11971 0.0 Click
41964264..1965220 sugar ABC transporter, permease protein, putative; CGSSp3BS71_11976 0.0 Click
51965305..1965517 hypothetical protein; CGSSp3BS71_11981 0.0 Click
61965653..1965820 cytidine deaminase; CGSSp3BS71_11986 0.0 Click
71965820..1966029 PROPHAGE_Escher_MG1655: IS150 transposase B; CGSSp3BS71_11991; phage(gi16131429) 2e-07 Click
8complement(1966127..1967275) PHAGE_Strept_PH10: hypothetical protein PH10_gp01; CGSSp3BS71_04034; phage(gi238821318) 0.0 Click
9complement(1967461..1968384) PHAGE_Staphy_phi2958PVL: hypothetical protein phi2958PVL_gp05; CGSSp3BS71_04039; phage(gi209363557) 1e-51 Click
10complement(1968397..1968780) PHAGE_Strept_PH10: hypothetical protein PH10_gp03; CGSSp3BS71_04044; phage(gi238821320) 8e-25 Click
11complement(1968793..1969158) PHAGE_Strept_PH10: hypothetical protein PH10_gp04; CGSSp3BS71_04049; phage(gi238821321) 8e-28 Click
121969429..1969444 attL    AAAGGAGGTGAGGAAA 0.0 Click
13complement(1969535..1969756) hypothetical protein; CGSSp3BS71_04054 0.0 Click
141969875..1970021 hypothetical protein; CGSSp3BS71_04059 0.0 Click
151970033..1970236 PHAGE_Strept_phi3396: hypothetical protein phi3396_06; CGSSp3BS71_04064; phage(gi126011068) 7e-19 Click
161970253..1970450 PHAGE_Strept_SM1: gp9; CGSSp3BS71_04069; phage(gi32469440) 9e-29 Click
171970461..1970622 hypothetical protein; CGSSp3BS71_04074 0.0 Click
18complement(1970617..1971042) phage protein; CGSSp3BS71_04079 0.0 Click
191971096..1971806 PHAGE_Strept_PH10: hypothetical protein PH10_gp08; CGSSp3BS71_04084; phage(gi238821325) 6e-120 Click
201971820..1972077 PHAGE_Strept_PH10: hypothetical protein PH10_gp09; CGSSp3BS71_04089; phage(gi238821326) 6e-41 Click
211972163..1972483 PHAGE_Strept_1: hypothetical protein EJ-1p17; CGSSp3BS71_04094; phage(gi39653691) 7e-40 Click
221972499..1972795 PHAGE_Strept_SM1: gp18; CGSSp3BS71_04099; phage(gi32469449) 4e-07 Click
231972788..1973594 PHAGE_Strept_SM1: gp19; CGSSp3BS71_04104; phage(gi32469450) 2e-125 Click
241973582..1973740 PHAGE_Strept_SM1: gp20; CGSSp3BS71_04109; phage(gi32469451) 7e-13 Click
251973734..1974504 PHAGE_Strept_SM1: gp21; CGSSp3BS71_04114; phage(gi32469452) 1e-123 Click
261974519..1974713 PHAGE_Strept_PH10: hypothetical protein PH10_gp12; CGSSp3BS71_04119; phage(gi238821329) 9e-19 Click
271974713..1974931 PHAGE_Strept_PH10: hypothetical protein PH10_gp15; CGSSp3BS71_04124; phage(gi238821332) 2e-15 Click
281974931..1975014 hypothetical protein; CGSSp3BS71_04129 0.0 Click
291975256..1975465 PHAGE_Strept_PH10: hypothetical protein PH10_gp20; CGSSp3BS71_04134; phage(gi238821337) 9e-10 Click
301975425..1975592 hypothetical protein; CGSSp3BS71_04139 0.0 Click
311975579..1975788 hypothetical protein; CGSSp3BS71_04144 0.0 Click
321975760..1976077 PHAGE_Strept_MM1: hypothetical protein MM1p22; CGSSp3BS71_04149; phage(gi15088763) 2e-55 Click
331976079..1976189 hypothetical protein; CGSSp3BS71_04154 0.0 Click
341976330..1976731 PHAGE_Strept_PH10: hypothetical protein PH10_gp27; CGSSp3BS71_04159; phage(gi238821344) 6e-68 Click
351976919..1977461 PHAGE_Strept_PH10: hypothetical protein PH10_gp28; CGSSp3BS71_04164; phage(gi238821345) 3e-102 Click
361977838..1978158 PHAGE_Strept_PH10: hypothetical protein PH10_gp30; CGSSp3BS71_04169; phage(gi238821347) 8e-52 Click
371978295..1978687 PHAGE_Strept_PH10: hypothetical protein PH10_gp31; CGSSp3BS71_04174; phage(gi238821348) 5e-67 Click
381978680..1980410 PHAGE_Strept_PH10: hypothetical protein PH10_gp32; CGSSp3BS71_04179; phage(gi238821349) 0.0 Click
391980418..1980636 PHAGE_Strept_PH10: hypothetical protein PH10_gp33; CGSSp3BS71_04184; phage(gi238821350) 5e-29 Click
401980637..1980652 attR    AAAGGAGGTGAGGAAA 0.0 Click
411980654..1981856 PHAGE_Strept_PH10: hypothetical protein PH10_gp34; CGSSp3BS71_04189; phage(gi238821351) 7e-173 Click
421981840..1982415 PHAGE_Strept_PH10: hypothetical protein PH10_gp35; CGSSp3BS71_04194; phage(gi238821352) 9e-93 Click
431982412..1983578 PHAGE_Strept_PH10: hypothetical protein PH10_gp36; CGSSp3BS71_04199; phage(gi238821353) 4e-110 Click
441983590..1983859 PHAGE_Strept_PH10: hypothetical protein PH10_gp37; CGSSp3BS71_04204; phage(gi238821354) 6e-14 Click
451983862..1984143 PHAGE_Strept_PH10: hypothetical protein PH10_gp38; CGSSp3BS71_04209; phage(gi238821355) 2e-34 Click
461984130..1984429 PHAGE_Strept_PH10: hypothetical protein PH10_gp39; CGSSp3BS71_04214; phage(gi238821356) 8e-49 Click
471984426..1984773 PHAGE_Strept_PH10: hypothetical protein PH10_gp40; CGSSp3BS71_04219; phage(gi238821357) 1e-59 Click
481984770..1985093 PHAGE_Strept_PH10: hypothetical protein PH10_gp41; CGSSp3BS71_04224; phage(gi238821358) 4e-52 Click
491985105..1985683 PHAGE_Strept_PH10: hypothetical protein PH10_gp42; CGSSp3BS71_04229; phage(gi238821359) 4e-88 Click
501985695..1986114 PHAGE_Strept_PH10: hypothetical protein PH10_gp43; CGSSp3BS71_04234; phage(gi238821360) 9e-73 Click
511986183..1986278 hypothetical protein; CGSSp3BS71_04239 0.0 Click
521986392..1989487 PHAGE_Strept_PH10: hypothetical protein PH10_gp44; CGSSp3BS71_04244; phage(gi238821361) 0.0 Click
531989484..1990206 PHAGE_Strept_PH10: hypothetical protein PH10_gp45; CGSSp3BS71_04249; phage(gi238821362) 2e-130 Click
541990207..1993053 PHAGE_Strept_PH10: hypothetical protein PH10_gp46; CGSSp3BS71_04254; phage(gi238821363) 0.0 Click
551993054..1996665 PHAGE_Strept_PH10: hypothetical protein PH10_gp46; possible; phage prophage LambdaBa01, minor structural protein; CGSSp3BS71_04269(gi238821363) 6e-99 Click
561996662..1996778 PHAGE_Strept_PH10: hypothetical protein PH10_gp46; CGSSp3BS71_04274; phage(gi238821363) 4e-09 Click
571996759..1996962 PHAGE_Strept_PH10: hypothetical protein PH10_gp47; CGSSp3BS71_04279; phage(gi238821364) 5e-28 Click
581996965..1997315 PHAGE_Strept_SMP: hypothetical protein; CGSSp3BS71_04284; phage(gi119953750) 2e-43 Click
591997324..1997740 PHAGE_Strept_MM1: putative holin 1; CGSSp3BS71_04289; phage(gi15088791) 4e-69 Click
601997744..1998076 PHAGE_Strept_MM1: putative holin 2; CGSSp3BS71_04294; phage(gi15088792) 5e-43 Click
611998080..1999036 PHAGE_Strept_MM1: N-acetylmuramoyl-L-alanine amidase; CGSSp3BS71_04299; phage(gi15088793) 0.0 Click
621999058..1999270 hypothetical protein; CGSSp3BS71_04304 0.0 Click
63complement(1999257..1999445) PHAGE_Strept_PH15: hypothetical protein phiPH15_gp59; CGSSp3BS71_04309; phage(gi190151474) 5e-06 Click
64complement(1999449..1999553) hypothetical protein; CGSSp3BS71_04314 0.0 Click
65complement(1999611..1999715) hypothetical protein; CGSSp3BS71_04319 0.0 Click
662000013..2000480 PHAGE_Microm_MpV1: hypothetical protein; CGSSp3BS71_04324; phage(gi313768407) 2e-07 Click
672000666..2001109 PHAGE_Clostr_st: putative dUTPase; CGSSp3BS71_04329; phage(gi80159764) 3e-31 Click
682001069..2001626 deoxyuridine 5'-triphosphate nucleotidohydrolase; CGSSp3BS71_04334 0.0 Click
69complement(2001170..2001289) hypothetical protein; CGSSp3BS71_04339 0.0 Click
702001739..2003001 PHAGE_Bacill_W.Ph.: gp46; CGSSp3BS71_04344; phage(gi371671106) 1e-06 Click
712003074..2003571 hypothetical protein; CGSSp3BS71_04349 0.0 Click
722003596..2003880 hypothetical protein; CGSSp3BS71_04354 0.0 Click
732003950..2004426 predicted repair protein; CGSSp3BS71_04359 0.0 Click
742004571..2005539 PHAGE_Salmon_7_11: putative ribose-phosphate pyrophosphokinase; CGSSp3BS71_04364; phage(gi345461227) 1e-19 Click
752005774..2006042 PROPHAGE_Ralsto_GMI1000: isrso11-transposase orfb protein; CGSSp3BS71_07821; phage(gi17546155) 4e-20 Click
762007180..2007192 attR    ATATAAAATATAA 0.0 Click