Haemophilus influenzae 22.4-21 whole genome shotgun [asmbl_id: NC_000000].1851097, GC%: 38.04%



Text file for download

            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 17 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1complement(591202..592434) PHAGE_Microc_LMM01: lysozyme/metalloendopeptidase; CGSHiR3021_07227; phage(gi117530266) 3e-11 Click
2592610..593293 phosphoglyceromutase; CGSHiR3021_07232 0.0 Click
3complement(593371..593583) 50S ribosomal protein L31; CGSHiR3021_07237 0.0 Click
4593760..594482 A/G-specific adenine glycosylase; CGSHiR3021_07242 0.0 Click
5594509..594895 anhydro-N-acetylmuramic acid kinase; CGSHiR3021_07247 0.0 Click
6594873..595145 hypothetical protein; CGSHiR3021_07252 0.0 Click
7595160..596233 PHAGE_Entero_PRD1: transglycosylase; CGSHiR3021_07257; phage(gi9626369) 6e-06 Click
8596471..596546 tRNA 0.0 Click
9596549..596624 tRNA 0.0 Click
10complement(596853..597533) murein transglycosylase C; CGSHiR3021_07262 0.0 Click
11complement(597530..597814) PHAGE_Vibrio_11895_B1: nicotinamide-nucleotide adenylyltransferase; CGSHiR3021_07267; phage(gi472340025) 5e-06 Click
12complement(597820..598437) PHAGE_Entero_EPS7: nicotinamide-nucleotide adenylyltransferase; CGSHiR3021_07272; phage(gi182682885) 2e-20 Click
13complement(598383..598751) PHAGE_Cronob_vB_CsaM_GAP32: nicotinamide-nucleotide adenylyltransferase; CGSHiR3021_07277; phage(gi414087271) 3e-10 Click
14599012..599659 PHAGE_Synech_S_SKS1: 3,4-dihydroxy-2-butanone 4-phosphate synthase; CGSHiR3021_07282; phage(gi472340887) 5e-37 Click
15599661..600521 PHAGE_Acanth_moumouvirus: glycosyltransferase family 10; CGSHiR3021_07287; phage(gi441432618) 3e-11 Click
16complement(600570..601052) rRNA methylase; CGSHiR3021_07292 0.0 Click
17complement(601065..601646) hypothetical protein; CGSHiR3021_07297 0.0 Click
18601743..602942 cell division protein FtsY; CGSHiR3021_07302 0.0 Click
19602961..603596 PHAGE_Plankt_PaV_LD: ABC transporter; CGSHiR3021_07307; phage(gi371496158) 9e-26 Click

Region 2, total : 7 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
11284722..1284934 PROPHAGE_Neisse_MC58: IS1016C2 transposase; CGSHiR3021_02204; phage(gi15677262) 1e-07 Click
21285137..1286108 PHAGE_Staphy_phiN315: probable ss-1,3-N-acetylglucosaminyltransferase; CGSHiR3021_02209; phage(gi30043988) 1e-06 Click
3complement(1286292..1286741) PHAGE_Lactoc_lato: putative tail lysin; CGSHiR3021_02214; phage(gi30089904) 6e-05 Click
4complement(1286781..1287032) glucose-6-phosphate isomerase; CGSHiR3021_02219 0.0 Click
5complement(1287069..1287650) hypothetical protein; CGSHiR3021_02224 0.0 Click
61287730..1288989 PHAGE_Acanth_mimivirus: arginyl-tRNA synthetase; CGSHiR3021_02229; phage(gi311978065) 2e-56 Click
71288986..1289462 PHAGE_Acanth_moumouvirus: arginyl-tRNA synthetase; CGSHiR3021_02234; phage(gi441432642) 9e-20 Click
8complement(1289756..1290247) acetolactate synthase 3 regulatory subunit; CGSHiR3021_02239 0.0 Click
9complement(1290247..1291968) PHAGE_Ostreo_2: putative acetolactate synthase large subunit; CGSHiR3021_02244; phage(gi314055125) 2e-52 Click

Region 3, total : 35 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
11588520..1588636 PROPHAGE_Escher_MG1655: IS150 transposase B; CGSHiR3021_00242; phage(gi16131429) 5e-06 Click
2complement(1589423..1590433) PHAGE_Mannhe_phiMHaA1: capsid portal protein Q; CGSHiR3021_00247; phage(gi109289937) 5e-122 Click
3complement(1590443..1590742) PHAGE_Burkho_KS5: gp42; CGSHiR3021_00252; phage(gi327198040) 4e-18 Click
4complement(1590799..1591113) PHAGE_Mannhe_phiMHaA1: terminase ATPase subunit; CGSHiR3021_00257; phage(gi109289938) 5e-24 Click
5complement(1591094..1592218) PHAGE_Mannhe_phiMHaA1: terminase ATPase subunit; CGSHiR3021_00262; phage(gi109289938) 6e-147 Click
61592287..1592715 PHAGE_Haemop_HP2: hypothetical protein HP2p14; CGSHiR3021_00267; phage(gi17981828) 1e-12 Click
7complement(1592808..1592987) hypothetical protein; CGSHiR3021_00272 0.0 Click
81592981..1593613 PHAGE_Aggreg_S1249: possible bacteriophage antirepressor; CGSHiR3021_00277; phage(gi273809598) 4e-36 Click
91593811..1594596 PHAGE_Mannhe_phiMHaA1: capsid scaffolding protein O; CGSHiR3021_00282; phage(gi109289939) 7e-64 Click
101594618..1595667 PHAGE_Mannhe_phiMHaA1: major capsid protein N; CGSHiR3021_00287; phage(gi109289940) 6e-91 Click
111595679..1596329 PHAGE_Mannhe_phiMHaA1: terminase small subunit; CGSHiR3021_00292; phage(gi109289941) 6e-47 Click
121596667..1597128 PHAGE_Mannhe_phiMHaA1: head completion protein L; CGSHiR3021_00297; phage(gi109289942) 1e-36 Click
131597128..1597337 PHAGE_Mannhe_phiMHaA1: tail synthesis protein X; CGSHiR3021_00302; phage(gi109289943) 1e-11 Click
141597339..1597560 PHAGE_Mannhe_phiMHaA1: possible holin; CGSHiR3021_00307; phage(gi109289944) 2e-05 Click
151597553..1598071 PHAGE_Mannhe_phiMHaA1: endolysin; CGSHiR3021_00312; phage(gi109289945) 2e-38 Click
161598056..1598331 hypothetical protein; CGSHiR3021_00317 0.0 Click
171598322..1598585 hypothetical protein; CGSHiR3021_00322 0.0 Click
181598582..1598797 PHAGE_Mannhe_phiMHaA1: hypothetical protein MhaA1p11; CGSHiR3021_00327; phage(gi109289947) 2e-13 Click
191598794..1599264 PROPHAGE_Salmon_Ty2: putative phage tail protein; CGSHiR3021_00332; phage(gi29143748) 1e-30 Click
201599264..1599536 PHAGE_Burkho_phiE202: gp39, phage virion morphogenesis protein; CGSHiR3021_00337; phage(gi134288746) 2e-18 Click
211599547..1599723 PHAGE_Mannhe_phiMHaA1: tail synthesis protein S; CGSHiR3021_00342; phage(gi109289949) 3e-09 Click
22complement(1599701..1599841) hypothetical protein; CGSHiR3021_00347 0.0 Click
231599876..1600046 hypothetical protein; CGSHiR3021_00352 0.0 Click
241600043..1602778 PHAGE_Vibrio_vB_VpaM_MAR: tail length tape-measure protein; CGSHiR3021_00357; phage(gi428782750) 6e-120 Click
251602879..1603436 hypothetical protein; CGSHiR3021_00362 0.0 Click
261603516..1603872 hypothetical protein; CGSHiR3021_00367 0.0 Click
271603982..1604575 PHAGE_Mannhe_phiMHaA1: baseplate assembly protein V; CGSHiR3021_00372; phage(gi109289954) 3e-62 Click
281604577..1604915 PHAGE_Mannhe_phiMHaA1: baseplate assembly protein W; CGSHiR3021_00377; phage(gi109289955) 5e-21 Click
291604912..1605826 PHAGE_Mannhe_phiMHaA1: baseplate assembly protein J; CGSHiR3021_00382; phage(gi109289956) 1e-97 Click
301605813..1606352 PHAGE_Mannhe_phiMHaA1: tail formation protein I; CGSHiR3021_00387; phage(gi109289957) 2e-51 Click
311606361..1607895 PHAGE_Mannhe_phiMHaA1: variable tail fiber protein H; CGSHiR3021_00392; phage(gi109289958) 4e-41 Click
32complement(1607905..1608081) hypothetical protein; CGSHiR3021_11019 0.0 Click
33complement(1608082..1608846) hypothetical protein; CGSHiR3021_11024 0.0 Click
34complement(1608917..1609915) tetraacyldisaccharide 4'-kinase; CGSHiR3021_11029 0.0 Click
35complement(1609988..1611751) PHAGE_Bacill_SPBc2: ABC transporter; CGSHiR3021_11034; phage(gi9630145) 5e-36 Click

Region 4, total : 34 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
11740028..1740684 PHAGE_Staphy_JD007: glycerophosphoryl diester phosphodiesterase; CGSHiR3021_02940; phage(gi428783010) 4e-10 Click
21740648..1741121 glycerophosphoryl diester phosphodiesterase precursor; CGSHiR3021_02945 0.0 Click
31741352..1742146 PHAGE_Acanth_1: hypothetical protein ATCV1_Z300R; CGSHiR3021_02950; phage(gi155371247) 3e-20 Click
41742167..1743651 glycerol kinase; CGSHiR3021_02955 0.0 Click
51743726..1743867 PHAGE_Haemop_HP2: tail collar; CGSHiR3021_00492; phage(gi17981848) 1e-14 Click
61743873..1744046 hypothetical protein; CGSHiR3021_00497 0.0 Click
71744067..1744216 PHAGE_Haemop_HP2: tail collar; CGSHiR3021_00502; phage(gi17981848) 2e-07 Click
81744209..1744619 PHAGE_Haemop_SuMu: enoyl-CoA hydratase/carnithine racemase-like protein; CGSHiR3021_00507; phage(gi418489075) 4e-37 Click
91744549..1744689 PHAGE_Haemop_SuMu: enoyl-CoA hydratase/carnithine racemase-like protein; CGSHiR3021_00512; phage(gi418489075) 1e-05 Click
101744847..1746031 PHAGE_Salmon_RE_2010: major tail sheath protein; CGSHiR3021_00517; phage(gi418489720) 2e-103 Click
111746035..1746367 PHAGE_Mannhe_phiMHaA1: tail tube protein FII; CGSHiR3021_00522; phage(gi109289961) 5e-25 Click
121746342..1746542 PHAGE_Mannhe_phiMHaA1: tail tube protein FII; CGSHiR3021_00527; phage(gi109289961) 5e-17 Click
131746608..1746907 PHAGE_Ralsto_phiRSA1: bacteriophage gpE; CGSHiR3021_00532; phage(gi145708103) 4e-17 Click
141746907..1747053 PHAGE_Burkho_KS5: gp17; CGSHiR3021_00537; phage(gi327198015) 4e-10 Click
151747034..1747159 hypothetical protein; CGSHiR3021_00542 0.0 Click
161747221..1747520 PHAGE_Mannhe_phiMHaA1: tail protein U; CGSHiR3021_00547; phage(gi109289964) 5e-28 Click
171747517..1747657 PHAGE_Mannhe_phiMHaA1: tail protein U; CGSHiR3021_00552; phage(gi109289964) 1e-06 Click
181747657..1748877 PHAGE_Mannhe_phiMHaA1: tail protein D; CGSHiR3021_00557; phage(gi109289965) 3e-133 Click
19complement(1748895..1749284) hypothetical protein; CGSHiR3021_00562 0.0 Click
20complement(1749344..1750924) PHAGE_Rachip_MNPV: hypothetical protein; CGSHiR3021_00567; phage(gi23577825) 1e-06 Click
21complement(1751108..1751350) hypothetical protein; CGSHiR3021_00572 0.0 Click
22complement(1751350..1752078) hypothetical protein; CGSHiR3021_00577 0.0 Click
23complement(1752138..1752377) PHAGE_Mannhe_phiMHaA1: hypothetical protein MhaA1p32; CGSHiR3021_00582; phage(gi109289967) 2e-10 Click
24complement(1752374..1752862) PHAGE_Mannhe_phiMHaA1: hypothetical protein MhaA1p34; CGSHiR3021_00587; phage(gi109289969) 2e-35 Click
25complement(1753039..1753584) PHAGE_Mannhe_phiMHaA1: CI repressor; CGSHiR3021_00592; phage(gi109289970) 5e-27 Click
261753704..1753928 PHAGE_Salmon_ST160: Cro; CGSHiR3021_00597; phage(gi318065926) 2e-14 Click
27complement(1753983..1754147) hypothetical protein; CGSHiR3021_00602 0.0 Click
28complement(1754260..1754553) hypothetical protein; CGSHiR3021_00607 0.0 Click
291754634..1754789 hypothetical protein; CGSHiR3021_00612 0.0 Click
301755006..1755509 hypothetical protein; CGSHiR3021_00617 0.0 Click
31complement(1755394..1755654) hypothetical protein; CGSHiR3021_00622 0.0 Click
321755697..1755984 hypothetical protein; CGSHiR3021_00627 0.0 Click
331756075..1756338 hypothetical protein; CGSHiR3021_00632 0.0 Click
341756356..1756736 PHAGE_Haemop_HP2: hypothetical protein HP2p06; CGSHiR3021_00637; phage(gi17981821) 7e-16 Click

Region 5, total : 19 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
11808640..1808651 attL    AAATTAATGGAA 0.0 Click
2complement(1808764..1809060) PHAGE_Mannhe_phiMHaA1: integrase; CGSHiR3021_03113; phage(gi109289985) 2e-20 Click
3complement(1809542..1810306) hypothetical protein; CGSHiR3021_03118 0.0 Click
4complement(1810310..1810837) hypothetical protein; CGSHiR3021_03123 0.0 Click
5complement(1810847..1811002) hypothetical protein; CGSHiR3021_03128 0.0 Click
6complement(1811098..1811730) hypothetical protein; CGSHiR3021_03133 0.0 Click
7complement(1811727..1812008) hypothetical protein; CGSHiR3021_03138 0.0 Click
8complement(1812005..1812415) hypothetical protein; CGSHiR3021_03143 0.0 Click
9complement(1812429..1813250) hypothetical protein; CGSHiR3021_03148 0.0 Click
10complement(1813303..1813767) PHAGE_Haemop_SuMu: enoyl-CoA hydratase/carnithine racemase-like protein; CGSHiR3021_03153; phage(gi418489075) 2e-46 Click
11complement(1813764..1814246) PHAGE_Haemop_HP2: tail collar; CGSHiR3021_03158; phage(gi17981848) 7e-79 Click
121814247..1814820 PHAGE_Escher_TL_2011b: putative adenine methylase; CGSHiR3021_00020; phage(gi418487629) 9e-43 Click
131814895..1815311 PHAGE_Aggreg_S1249: putative recombination protein NinB; CGSHiR3021_00025; phage(gi273809585) 1e-57 Click
141815312..1815404 hypothetical protein; CGSHiR3021_00030 0.0 Click
151815404..1815688 PHAGE_Escher_HK75: hypothetical protein; CGSHiR3021_00035; phage(gi356870725) 4e-38 Click
161815685..1816050 PHAGE_Escher_HK75: RusA-like protein; CGSHiR3021_00040; phage(gi356870726) 4e-16 Click
171816043..1816768 hypothetical protein; CGSHiR3021_00045 0.0 Click
181816849..1817364 hypothetical protein; CGSHiR3021_00050 0.0 Click
191817376..1817543 hypothetical protein; CGSHiR3021_00055 0.0 Click
201818021..1818911 PHAGE_Salmon_epsilon34: Ant; CGSHiR3021_00060; phage(gi221328691) 3e-62 Click
211830306..1830317 attR    AAATTAATGGAA 0.0 Click