Haemophilus influenzae PittHH whole genome shotgun sequence. [asmbl_id: NC_000000].1837347, GC%: 38.00%



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            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 17 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
174204..74215 attL    ATCAACAAAATT 0.0 Click
2complement(77255..77740) PHAGE_Haemop_HP2: tail fibers; CGSHiHH_09210; phage(gi17981847) 1e-23 Click
3complement(77715..77825) PHAGE_Haemop_Aaphi23: putative tail fiber protein; CGSHiHH_09215; phage(gi31544053) 6e-12 Click
4complement(77836..78291) PHAGE_Haemop_Aaphi23: hypothetical protein Aaphi23p49; CGSHiHH_09220; phage(gi31544052) 1e-59 Click
5complement(78304..79404) PHAGE_Haemop_Aaphi23: hypothetical protein Aaphi23p33; CGSHiHH_09225; phage(gi31544033) 2e-175 Click
6complement(79467..79775) hypothetical protein; CGSHiHH_09230 0.0 Click
7complement(79932..80282) hypothetical protein; CGSHiHH_09235 0.0 Click
8complement(80279..80947) PHAGE_Aggreg_S1249: uncharacterized phage-encoded protein; CGSHiHH_09240; phage(gi273809589) 9e-59 Click
9complement(80995..81291) PHAGE_Haemop_Aaphi23: hypothetical protein Aaphi23p14; CGSHiHH_09245; phage(gi31544012) 4e-34 Click
10complement(81312..81518) PHAGE_Entero_mEp213: prophage anti-repressor; CGSHiHH_09250; phage(gi428782642) 1e-13 Click
1181649..82305 PHAGE_Entero_mEpX1: prophage repressor; CGSHiHH_09255; phage(gi428781915) 7e-26 Click
1282423..83094 PHAGE_Riemer_RAP44: DNA-damage-inducible protein D; CGSHiHH_09260; phage(gi418489887) 8e-42 Click
13complement(83715..83885) hypothetical protein; CGSHiHH_09265 0.0 Click
1483912..84121 hypothetical protein; CGSHiHH_09270 0.0 Click
15complement(84619..84789) hypothetical protein; CGSHiHH_09275 0.0 Click
1684924..85043 hypothetical protein; CGSHiHH_09280 0.0 Click
1785085..85183 hypothetical protein; CGSHiHH_09285 0.0 Click
1885273..85284 attR    ATCAACAAAATT 0.0 Click
19complement(85349..85768) PHAGE_Mannhe_phiMHaA1: integrase; CGSHiHH_09290; phage(gi109289985) 8e-19 Click

Region 2, total : 49 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1complement(678553..678933) PHAGE_Haemop_HP1: hypothetical protein HP1p09; CGSHiHH_00967; phage(gi9628609) 5e-16 Click
2complement(678951..679214) hypothetical protein; CGSHiHH_00972 0.0 Click
3complement(679305..679592) hypothetical protein; CGSHiHH_00977 0.0 Click
4679635..679895 hypothetical protein; CGSHiHH_00982 0.0 Click
5complement(679780..680283) hypothetical protein; CGSHiHH_00987 0.0 Click
6complement(680340..680534) hypothetical protein; CGSHiHH_00992 0.0 Click
7680596..680865 hypothetical protein; CGSHiHH_00997 0.0 Click
8complement(680825..681196) hypothetical protein; CGSHiHH_01002 0.0 Click
9complement(681200..681415) PHAGE_Salmon_ST160: Cro; CGSHiHH_01007; phage(gi318065926) 7e-14 Click
10681537..682214 PHAGE_Mannhe_phiMHaA1: CI repressor; CGSHiHH_01012; phage(gi109289970) 3e-45 Click
11682218..682949 PHAGE_Mannhe_phiMHaA1: hypothetical protein MhaA1p34; CGSHiHH_01017; phage(gi109289969) 8e-11 Click
12682946..683173 PHAGE_Mannhe_phiMHaA1: hypothetical protein MhaA1p32; CGSHiHH_01022; phage(gi109289967) 1e-10 Click
13683154..683270 hypothetical protein; CGSHiHH_01027 0.0 Click
14683282..684403 hypothetical protein; CGSHiHH_01032 0.0 Click
15complement(684437..685630) PHAGE_Mannhe_phiMHaA1: tail protein D; CGSHiHH_01037; phage(gi109289965) 2e-102 Click
16complement(685630..686067) PHAGE_Mannhe_phiMHaA1: tail protein U; CGSHiHH_01042; phage(gi109289964) 1e-41 Click
17complement(686195..686341) PHAGE_Burkho_KS5: gp17; CGSHiHH_01047; phage(gi327198015) 4e-10 Click
18complement(686341..686640) PHAGE_Mannhe_phiMHaA1: tail protein E; CGSHiHH_01052; phage(gi109289962) 2e-12 Click
19complement(686724..687230) PHAGE_Mannhe_phiMHaA1: tail tube protein FII; CGSHiHH_01057; phage(gi109289961) 5e-54 Click
20complement(687234..688418) PROPHAGE_Salmon_Ty2: major tail sheath protein; CGSHiHH_01062; phage(gi29143758) 5e-103 Click
21complement(688563..688985) PHAGE_Haemop_SuMu: enoyl-CoA hydratase/carnithine racemase-like protein; CGSHiHH_01067; phage(gi418489075) 1e-49 Click
22complement(689050..689652) PHAGE_Haemop_HP2: tail collar; CGSHiHH_01072; phage(gi17981848) 2e-99 Click
23complement(689664..691901) PHAGE_Mannhe_phiMHaA1: variable tail fiber protein H; CGSHiHH_01077; phage(gi109289958) 1e-15 Click
24complement(692010..692171) PHAGE_Mannhe_phiMHaA1: variable tail fiber protein H; CGSHiHH_01082; phage(gi109289958) 7e-08 Click
25complement(692180..692719) PHAGE_Mannhe_phiMHaA1: tail formation protein I; CGSHiHH_01087; phage(gi109289957) 2e-51 Click
26complement(692706..693620) PHAGE_Mannhe_phiMHaA1: baseplate assembly protein J; CGSHiHH_01092; phage(gi109289956) 1e-97 Click
27complement(693617..693955) PHAGE_Mannhe_phiMHaA1: baseplate assembly protein W; CGSHiHH_01097; phage(gi109289955) 5e-21 Click
28complement(693957..694556) PHAGE_Mannhe_phiMHaA1: baseplate assembly protein V; CGSHiHH_01102; phage(gi109289954) 1e-62 Click
29complement(694660..695088) hypothetical protein; CGSHiHH_01107 0.0 Click
30complement(695097..695654) hypothetical protein; CGSHiHH_01112 0.0 Click
31complement(695755..698412) PHAGE_Mannhe_phiMHaA1: tail protein T; CGSHiHH_01117; phage(gi109289951) 8e-171 Click
32698485..698832 hypothetical protein; CGSHiHH_01122 0.0 Click
33complement(698833..699009) PHAGE_Mannhe_phiMHaA1: tail synthesis protein S; CGSHiHH_01127; phage(gi109289949) 6e-06 Click
34699109..699381 hypothetical protein; CGSHiHH_01132 0.0 Click
35complement(699359..699817) PHAGE_Mannhe_phiMHaA1: tail synthesis protein S; CGSHiHH_01137; phage(gi109289949) 1e-27 Click
36complement(699817..700287) PROPHAGE_Salmon_Ty2: putative phage tail protein; CGSHiHH_01142; phage(gi29143748) 2e-31 Click
37complement(700284..700508) PHAGE_Mannhe_phiMHaA1: hypothetical protein MhaA1p11; CGSHiHH_01147; phage(gi109289947) 2e-13 Click
38complement(700683..701033) PHAGE_Haemop_HP1: hypothetical protein HP1p32; CGSHiHH_01152; phage(gi9628631) 9e-05 Click
39complement(701018..701536) PHAGE_Mannhe_phiMHaA1: endolysin; CGSHiHH_01157; phage(gi109289945) 2e-38 Click
40complement(701529..701750) PHAGE_Mannhe_phiMHaA1: possible holin; CGSHiHH_01162; phage(gi109289944) 5e-05 Click
41complement(701752..701961) PHAGE_Mannhe_phiMHaA1: tail synthesis protein X; CGSHiHH_01167; phage(gi109289943) 2e-11 Click
42complement(701961..702467) PHAGE_Mannhe_phiMHaA1: head completion protein L; CGSHiHH_01172; phage(gi109289942) 8e-36 Click
43complement(702760..703410) PHAGE_Mannhe_phiMHaA1: terminase small subunit; CGSHiHH_01177; phage(gi109289941) 4e-47 Click
44complement(703422..704471) PHAGE_Mannhe_phiMHaA1: major capsid protein N; CGSHiHH_01182; phage(gi109289940) 6e-91 Click
45complement(704493..705308) PHAGE_Mannhe_phiMHaA1: capsid scaffolding protein O; CGSHiHH_01187; phage(gi109289939) 9e-72 Click
46705473..707254 PHAGE_Mannhe_phiMHaA1: terminase ATPase subunit; CGSHiHH_01192; phage(gi109289938) 0.0 Click
47707346..708275 PHAGE_Mannhe_phiMHaA1: capsid portal protein Q; CGSHiHH_01197; phage(gi109289937) 5e-115 Click
48complement(708400..708543) hypothetical protein; CGSHiHH_01202 0.0 Click
49complement(709061..709177) PROPHAGE_Escher_MG1655: IS150 transposase B; CGSHiHH_01207; phage(gi16131429) 2e-05 Click

Region 3, total : 43 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
11002061..1002297 PHAGE_Escher_D108: Ner; CGSHiHH_00553; phage(gi281199646) 6e-12 Click
21002311..1003405 PHAGE_Entero_Mu: transposase; CGSHiHH_00558; phage(gi9633496) 1e-42 Click
31003402..1004157 PHAGE_Entero_Mu: transposase; CGSHiHH_00563; phage(gi9633496) 3e-33 Click
41004184..1005101 PHAGE_Haemop_SuMu: phage transposase; CGSHiHH_00568; phage(gi418489040) 3e-26 Click
51005101..1005304 hypothetical protein; CGSHiHH_00573 0.0 Click
61005326..1005868 PHAGE_Haemop_SuMu: host-nuclease inhibitor protein; CGSHiHH_00578; phage(gi418489043) 3e-49 Click
71005964..1006233 PHAGE_Burkho_BcepMu: gp02; CGSHiHH_00583; phage(gi48696912) 1e-05 Click
81006234..1006422 hypothetical protein; CGSHiHH_00588 0.0 Click
91006419..1006955 PHAGE_Haemop_SuMu: hypothetical protein; CGSHiHH_00593; phage(gi418489048) 6e-37 Click
101007109..1007345 PHAGE_Burkho_BcepMu: gp01; CGSHiHH_00598; phage(gi48696911) 8e-06 Click
11complement(1007438..1007551) hypothetical protein; CGSHiHH_00603 0.0 Click
121007627..1007983 hypothetical protein; CGSHiHH_00608 0.0 Click
131007983..1008516 hypothetical protein; CGSHiHH_00613 0.0 Click
141008941..1009504 hypothetical protein; CGSHiHH_00618 0.0 Click
151009588..1010139 PHAGE_Haemop_SuMu: putative N-acetylmuramoyl-L-alanine amidase; CGSHiHH_00623; phage(gi418489052) 7e-76 Click
161010142..1010366 hypothetical protein; CGSHiHH_00628 0.0 Click
171010363..1010503 hypothetical protein; CGSHiHH_00633 0.0 Click
181010506..1010739 PHAGE_Haemop_SuMu: hypothetical protein; CGSHiHH_00638; phage(gi418489053) 4e-22 Click
191010732..1010983 hypothetical protein; CGSHiHH_00643 0.0 Click
201011149..1011424 PHAGE_Escher_D108: hypothetical protein; CGSHiHH_00648; phage(gi281199668) 1e-05 Click
211011421..1011726 PHAGE_Escher_D108: hypothetical protein; CGSHiHH_00653; phage(gi281199669) 2e-26 Click
221011749..1011868 PHAGE_Escher_D108: hypothetical protein; CGSHiHH_00658; phage(gi281199670) 2e-06 Click
231011963..1012223 PHAGE_Escher_D108: hypothetical protein; CGSHiHH_00663; phage(gi281199670) 4e-06 Click
241012248..1012319 hypothetical protein; CGSHiHH_00668 0.0 Click
251012319..1013872 PHAGE_Burkho_BcepMu: gp28; CGSHiHH_00673; phage(gi48696938) 1e-150 Click
261013875..1015293 PHAGE_Burkho_BcepMu: gp29; CGSHiHH_00678; phage(gi48696939) 1e-112 Click
271015294..1016571 PHAGE_Rhodob_RcapMu: head morphogenesis protein; CGSHiHH_00683; phage(gi356870875) 5e-29 Click
281016758..1016946 hypothetical protein; CGSHiHH_00688 0.0 Click
291017149..1017649 PHAGE_Burkho_BcepMu: gp31; CGSHiHH_00693; phage(gi48696941) 8e-07 Click
301017892..1018428 PHAGE_Burkho_BcepMu: gp32; CGSHiHH_00698; phage(gi48696942) 3e-46 Click
311018516..1018992 PHAGE_Burkho_BcepMu: gp33; CGSHiHH_00703; phage(gi48696943) 2e-24 Click
321019011..1019937 PHAGE_Burkho_BcepMu: gp34; CGSHiHH_00708; phage(gi48696944) 4e-76 Click
331020003..1020266 hypothetical protein; CGSHiHH_00713 0.0 Click
341020266..1020700 PHAGE_Burkho_BcepMu: gp36; CGSHiHH_00718; phage(gi48696946) 1e-19 Click
351020712..1021209 PHAGE_Burkho_BcepMu: gp37; CGSHiHH_00723; phage(gi48696947) 3e-22 Click
361021219..1021812 PHAGE_Burkho_BcepMu: gp39; CGSHiHH_00728; phage(gi48696949) 1e-23 Click
371021785..1022498 PHAGE_Burkho_BcepMu: gp39; CGSHiHH_00733; phage(gi48696949) 2e-57 Click
381022614..1023132 PHAGE_Burkho_BcepMu: gp40; CGSHiHH_00738; phage(gi48696950) 8e-39 Click
391023226..1023501 PHAGE_Burkho_BcepMu: gp41; CGSHiHH_00743; phage(gi48696951) 2e-07 Click
401023522..1023662 hypothetical protein; CGSHiHH_00748 0.0 Click
41complement(1023678..1023911) hypothetical protein; CGSHiHH_00753 0.0 Click
421023945..1024640 PHAGE_Vibrio_VP882: phage-related tail protein; CGSHiHH_00758; phage(gi126010872) 4e-26 Click
43complement(1024615..1024911) PHAGE_Entero_2008: putative tail assembly protein; CGSHiHH_00763; phage(gi209427790) 3e-08 Click