Ruminococcus gnavus ATCC 29149 .1, whole genome [asmbl_id: NC_000000].3501911, GC%: 42.88%



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            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 23 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1132365..132381 attL    GAATATGGCAGTTACAT 0.0 Click
2134073..136670 PROPHAGE_Escher_EDL933: ATP-dependent Clp protease ATP-binding subunit; RUMGNA_00181; phage(gi15800640) 2e-74 Click
3136667..137902 PHAGE_Bacill_SPBc2: IMPB/MUCB/SAMB family protein; RUMGNA_00182; phage(gi9630142) 1e-23 Click
4137903..138913 PHAGE_Entero_phiV10: O-acetyltransferase; RUMGNA_00183; phage(gi89152472) 4e-17 Click
5139136..139348 hypothetical protein; RUMGNA_00184 0.0 Click
6139438..139569 hypothetical protein; RUMGNA_00185 0.0 Click
7139579..140115 PHAGE_Plankt_PaV_LD: ABC transporter; RUMGNA_00186; phage(gi371496158) 3e-25 Click
8complement(140131..141525) PHAGE_Clostr_phiCD27: putative phage site-specific recombinase; RUMGNA_00187; phage(gi209901279) 2e-76 Click
9complement(141686..142183) hypothetical protein; RUMGNA_00188 0.0 Click
10142246..142443 PHAGE_Thermo_THSA_485A: transcriptional regulator, XRE family; RUMGNA_00189; phage(gi397912660) 7e-08 Click
11142563..142673 hypothetical protein; RUMGNA_00190 0.0 Click
12complement(142712..143092) PHAGE_Clostr_phiSM101: Helix-turn-helix domain protein; RUMGNA_00191; phage(gi110804036) 9e-13 Click
13143267..143503 hypothetical protein; RUMGNA_00192 0.0 Click
14143446..143688 hypothetical protein; RUMGNA_00193 0.0 Click
15143735..144052 hypothetical protein; RUMGNA_00194 0.0 Click
16144049..144600 PHAGE_Saimir_2: unnamed protein product; RUMGNA_00195; phage(gi9626029) 1e-05 Click
17144597..144899 PHAGE_Strept_Dp_1: RNA 2'-phosphotransferase; RUMGNA_00196; phage(gi327198349) 2e-08 Click
18144916..145266 hypothetical protein; RUMGNA_00197 0.0 Click
19145485..146132 PHAGE_Clostr_phiMMP02: DNA-cytosine methyltransferase; RUMGNA_00198; phage(gi414090431) 2e-47 Click
20146279..146878 PHAGE_Strept_MM1: putative DNA methylase; RUMGNA_00199; phage(gi15088756) 1e-29 Click
21146875..147711 hypothetical protein; RUMGNA_00200 0.0 Click
22147708..147968 hypothetical protein; RUMGNA_00201 0.0 Click
23147993..148133 hypothetical protein; RUMGNA_00202 0.0 Click
24148330..149328 PHAGE_Spirop_SVTS2: putative rep protein; RUMGNA_00203; phage(gi45597172) 8e-05 Click
25153350..153366 attR    GAATATGGCAGTTACAT 0.0 Click

Region 2, total : 9 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1364063..365928 PHAGE_Bacill_Fah: site-specific serine recombinase; RUMGNA_00443; phage(gi89152504) 3e-24 Click
2365921..366640 hypothetical protein; RUMGNA_00445 0.0 Click
3366684..366992 hypothetical protein; RUMGNA_00446 0.0 Click
4366989..367969 hypothetical protein; RUMGNA_00447 0.0 Click
5367959..368885 PHAGE_Staphy_EW: ORF017; RUMGNA_00448; phage(gi66395824) 2e-12 Click
6complement(368886..370277) PHAGE_Bacill_Fah: site-specific serine recombinase; RUMGNA_00449; phage(gi89152504) 7e-27 Click
7complement(370222..371856) PHAGE_Bacill_Fah: site-specific serine recombinase; RUMGNA_00450; phage(gi89152504) 5e-26 Click
8complement(371878..372828) PHAGE_Strept_SMP: putative lysin; RUMGNA_00451; phage(gi119953752) 2e-17 Click
9complement(372870..373346) PHAGE_Bacill_Fah: holin; RUMGNA_00452; phage(gi89152494) 6e-27 Click

Region 3, total : 52 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
11828533..1829060 PHAGE_Cronob_vB_CsaM_GAP32: hypothetical protein; RUMGNA_02046; phage(gi414087047) 3e-09 Click
21829231..1830172 PHAGE_Clostr_PhiS63: gp31; RUMGNA_02047; phage(gi388570658) 6e-18 Click
31830156..1830401 hypothetical protein; RUMGNA_02048 0.0 Click
41830388..1830798 PHAGE_Burkho_BcepGomr: BcepGomrgp64; RUMGNA_02049; phage(gi146329976) 4e-17 Click
51830826..1831614 PHAGE_Entero_EF62phi: chromosome partitioning ATPase; RUMGNA_02050; phage(gi384519759) 1e-13 Click
61831620..1831793 hypothetical protein; RUMGNA_02051 0.0 Click
71831799..1833067 PHAGE_Clostr_phiMMP02: ASCH domain protein; RUMGNA_02052; phage(gi414090436) 5e-16 Click
81833060..1833293 hypothetical protein; RUMGNA_02053 0.0 Click
91833286..1833453 hypothetical protein; RUMGNA_02054 0.0 Click
101833450..1833728 hypothetical protein; RUMGNA_02055 0.0 Click
111833721..1833816 hypothetical protein; RUMGNA_02056 0.0 Click
121833809..1834204 PHAGE_Lactoc_bIL286: SSB; RUMGNA_02057; phage(gi13095758) 2e-18 Click
131834225..1834791 PHAGE_Clostr_PhiS63: gp40; RUMGNA_02058; phage(gi388570666) 7e-27 Click
141834792..1835211 hypothetical protein; RUMGNA_02059 0.0 Click
151835387..1835686 PHAGE_Clostr_phiMMP04: HNH endonuclease; RUMGNA_02060; phage(gi414090491) 3e-13 Click
161835732..1836145 PHAGE_Staphy_phi5967PVL: hypothetical protein; RUMGNA_02061; phage(gi431810268) 1e-06 Click
171836152..1837807 PHAGE_Clostr_phiMMP04: terminase; RUMGNA_02062; phage(gi414090443) 5e-69 Click
181837825..1839075 PHAGE_Clostr_phiMMP04: phage portal protein; RUMGNA_02063; phage(gi414090444) 1e-49 Click
191839065..1839664 PHAGE_Entero_EFRM31: prohead protease; RUMGNA_02064; phage(gi327198114) 1e-17 Click
201839696..1840928 PHAGE_Lactob_c5: putative major head protein; RUMGNA_02065; phage(gi418488201) 3e-11 Click
211840945..1841559 PHAGE_Helico_2: hypothetical protein; RUMGNA_02066; phage(gi370703036) 1e-18 Click
221841577..1841927 hypothetical protein; RUMGNA_02067 0.0 Click
231841942..1842655 hypothetical protein; RUMGNA_02068 0.0 Click
241842669..1842896 hypothetical protein; RUMGNA_02069 0.0 Click
251842911..1843234 PHAGE_Geobac_GBSV1: hypothetical protein GPGV1_gp23; RUMGNA_02070; phage(gi115334633) 1e-10 Click
261843237..1843668 hypothetical protein; RUMGNA_02071 0.0 Click
271843665..1843991 hypothetical protein; RUMGNA_02072 0.0 Click
281843999..1844562 PHAGE_Bacill_WBeta: putative major tail protein; RUMGNA_02073; phage(gi85701389) 2e-18 Click
291844612..1845016 PHAGE_Lactob_c5: hypothetical protein; RUMGNA_02074; phage(gi418488165) 8e-09 Click
301845052..1845219 hypothetical protein; RUMGNA_02075 0.0 Click
311845222..1848353 PHAGE_Strept_3: putative human platelet-binding protein; RUMGNA_02076; phage(gi28876274) 1e-71 Click
321848357..1849244 PHAGE_Clostr_phiCD6356: putative phage tail protein; RUMGNA_02077; phage(gi326536863) 4e-40 Click
331849249..1850403 PHAGE_Clostr_phiCD6356: hypothetical protein; RUMGNA_02078; phage(gi326536864) 3e-32 Click
341850409..1851545 PHAGE_Clostr_phiCD6356: truncated putative phage structural protein; RUMGNA_02079; phage(gi326536865) 2e-43 Click
351851560..1851997 hypothetical protein; RUMGNA_02080 0.0 Click
361851990..1853132 PHAGE_Bordet_1: phage tail protein; RUMGNA_02081; phage(gi41179369) 1e-27 Click
371853173..1853529 hypothetical protein; RUMGNA_02082 0.0 Click
381853856..1854257 PHAGE_Bordet_1: reverse transcriptase; RUMGNA_02083; phage(gi41179367) 4e-16 Click
391854432..1854917 PHAGE_Snow_g_virus: DNA-directed DNA polymerase; RUMGNA_02084; phage(gi49247994) 1e-05 Click
401854942..1855121 hypothetical protein; RUMGNA_02085 0.0 Click
411855118..1855606 PHAGE_Clostr_phiMMP04: holin; RUMGNA_02086; phage(gi414090467) 6e-28 Click
421855685..1857094 PHAGE_Bacill_phiAGATE: putative tail lysin 2; RUMGNA_02087; phage(gi448260828) 2e-12 Click
431857263..1857382 hypothetical protein; RUMGNA_02088 0.0 Click
441857465..1857563 hypothetical protein; RUMGNA_02089 0.0 Click
451857560..1857757 PHAGE_Thermo_THSA_485A: transcriptional regulator, XRE family; RUMGNA_02090; phage(gi397912657) 4e-06 Click
461857779..1858285 hypothetical protein; RUMGNA_02091 0.0 Click
471858556..1859617 PHAGE_Staphy_phiPV83: transposase; RUMGNA_02092; phage(gi9635740) 6e-32 Click
481859610..1859735 hypothetical protein; RUMGNA_02093 0.0 Click
491859887..1860666 hypothetical protein; RUMGNA_02094 0.0 Click
501860749..1861075 hypothetical protein; RUMGNA_02095 0.0 Click
511861199..1861483 PHAGE_Bacill_36: GroES; RUMGNA_02096; phage(gi156564025) 3e-14 Click
521861540..1863168 PHAGE_Halocy_JM_2012: chaperonin GroEL; RUMGNA_02097; phage(gi389060206) 9e-63 Click

Region 4, total : 57 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
11923367..1923378 attL    AACAAAACAGTG 0.0 Click
2complement(1925779..1927386) PHAGE_Clostr_phiCD27: putative phage site-specific recombinase; RUMGNA_02175; phage(gi209901279) 2e-70 Click
3complement(1927352..1928377) PHAGE_Clostr_phiCD38_2: hypothetical protein; RUMGNA_02177; phage(gi333798122) 2e-14 Click
41928316..1928435 hypothetical protein; RUMGNA_02176 0.0 Click
51928511..1928708 PHAGE_Thermo_THSA_485A: transcriptional regulator, XRE family; RUMGNA_02178; phage(gi397912660) 2e-08 Click
61928905..1929015 hypothetical protein; RUMGNA_02179 0.0 Click
7complement(1929012..1929404) PHAGE_Clostr_phiCD38_2: CI phage repressor; RUMGNA_02181; phage(gi333798146) 9e-08 Click
81929404..1929577 hypothetical protein; RUMGNA_02180 0.0 Click
91929568..1929849 hypothetical protein; RUMGNA_02182 0.0 Click
101929868..1930224 hypothetical protein; RUMGNA_02183 0.0 Click
111930548..1931321 PHAGE_Lactob_Lj965: putative antirepressor; RUMGNA_02184; phage(gi41179226) 2e-49 Click
121931332..1931490 hypothetical protein; RUMGNA_02185 0.0 Click
131931543..1931656 hypothetical protein; RUMGNA_02186 0.0 Click
141931679..1931864 hypothetical protein; RUMGNA_02187 0.0 Click
151931854..1932042 hypothetical protein; RUMGNA_02188 0.0 Click
161932129..1932785 PHAGE_Strept_Sfi19: hypothetical protein Sfi19p28; RUMGNA_02189; phage(gi9632919) 2e-50 Click
171932797..1933060 hypothetical protein; RUMGNA_02190 0.0 Click
181933062..1933208 hypothetical protein; RUMGNA_02191 0.0 Click
191933186..1933650 PHAGE_Geobac_E2: Siphovirus Gp157-like protein; RUMGNA_02192; phage(gi148747762) 7e-17 Click
201933660..1934202 PHAGE_Rhodot_RM378: putative translation initiation factor; RUMGNA_02193; phage(gi30044008) 3e-08 Click
211934199..1934738 PHAGE_Lactob_c5: hypothetical protein; RUMGNA_02194; phage(gi418488179) 6e-11 Click
221934735..1935115 hypothetical protein; RUMGNA_02195 0.0 Click
231935229..1935639 PHAGE_Pseudo_AF: putative enoddeoxyribonuclease; RUMGNA_02196; phage(gi431810354) 3e-27 Click
241935639..1936460 PHAGE_Staphy_PH15: hypothetical protein ph49; RUMGNA_02197; phage(gi119967881) 8e-42 Click
251936465..1936647 hypothetical protein; RUMGNA_02198 0.0 Click
261936625..1937071 PHAGE_Lister_A500: gp52; RUMGNA_02199; phage(gi157325010) 4e-08 Click
271937071..1937259 hypothetical protein; RUMGNA_02200 0.0 Click
281937256..1937456 hypothetical protein; RUMGNA_02201 0.0 Click
291937458..1937649 hypothetical protein; RUMGNA_02202 0.0 Click
301937640..1938245 PHAGE_Clostr_phiCP34O: hypothetical protein; RUMGNA_02203; phage(gi422935446) 6e-06 Click
311938242..1938466 hypothetical protein; RUMGNA_02204 0.0 Click
321938459..1938881 hypothetical protein; RUMGNA_02205 0.0 Click
331939061..1939180 hypothetical protein; RUMGNA_02206 0.0 Click
341939234..1939306 tRNA 0.0 Click
351939431..1940096 PHAGE_Mycoba_Che12: gp1; RUMGNA_02208; phage(gi109392454) 1e-36 Click
361940086..1940448 hypothetical protein; RUMGNA_02209 0.0 Click
371940448..1940963 PHAGE_Entero_phiFL4A: terminase small subunit; RUMGNA_02210; phage(gi281416464) 1e-32 Click
381940938..1942266 PHAGE_Clostr_phiCD38_2: terminase large subunit; RUMGNA_02211; phage(gi333798109) 3e-48 Click
391942259..1943611 PHAGE_Clostr_phiCD38_2: minor capsid protein; RUMGNA_02212; phage(gi333798110) 7e-61 Click
401943612..1944814 PHAGE_Clostr_phiCD38_2: minor capsid protein; RUMGNA_02213; phage(gi333798111) 8e-52 Click
411944811..1945092 hypothetical protein; RUMGNA_02214 0.0 Click
421945077..1946585 hypothetical protein; RUMGNA_02215 0.0 Click
431946587..1946874 hypothetical protein; RUMGNA_02216 0.0 Click
441946988..1947098 hypothetical protein; RUMGNA_02217 0.0 Click
451947209..1947781 PHAGE_Lister_A118: putative scaffolding protein; RUMGNA_02218; phage(gi16798788) 9e-24 Click
461947807..1948664 PHAGE_Clostr_CD119: putative capsid protein; RUMGNA_02219; phage(gi90592716) 5e-24 Click
471948677..1949057 PHAGE_Clostr_phiCD38_2: hypothetical protein; RUMGNA_02220; phage(gi333798115) 2e-11 Click
481949054..1949389 hypothetical protein; RUMGNA_02221 0.0 Click
491949389..1949778 PHAGE_Bacill_PBC1: putative minor capsid protein 2; RUMGNA_02222; phage(gi389060334) 2e-06 Click
501949762..1950181 PHAGE_Clostr_phiCD38_2: hypothetical protein; RUMGNA_02223; phage(gi333798118) 1e-22 Click
511950184..1950711 hypothetical protein; RUMGNA_02224 0.0 Click
521950708..1951094 PHAGE_Clostr_phiCD38_2: hypothetical protein; RUMGNA_02225; phage(gi333798120) 1e-07 Click
531951091..1951645 PHAGE_Clostr_phiCD38_2: hypothetical protein; RUMGNA_02226; phage(gi333798121) 1e-20 Click
541951653..1951799 hypothetical protein; RUMGNA_02227 0.0 Click
551951852..1953708 PHAGE_Strept_Dp_1: TMP; RUMGNA_02228; phage(gi327198366) 4e-36 Click
561953705..1955174 PHAGE_Lactoc_lato: putative tail protein; RUMGNA_02229; phage(gi30089905) 2e-54 Click
571955174..1957675 PHAGE_Strept_2: receptor-binding protein; RUMGNA_02230; phage(gi273809745) 3e-88 Click
581957748..1957925 hypothetical protein; RUMGNA_02231 0.0 Click
591957989..1958000 attR    AACAAAACAGTG 0.0 Click
601958175..1959041 PHAGE_Strept_2: putative integrase; RUMGNA_02232; phage(gi28876262) 3e-12 Click

Region 5, total : 19 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1complement(2024218..2024529) PHAGE_Sulfit_pCB2047_B: hypothetical protein; RUMGNA_02311; phage(gi472342314) 3e-07 Click
2complement(2024557..2024697) hypothetical protein; RUMGNA_02312 0.0 Click
3complement(2024561..2024746) hypothetical protein; RUMGNA_02313 0.0 Click
4complement(2024763..2025431) hypothetical protein; RUMGNA_02314 0.0 Click
52025864..2025995 hypothetical protein; RUMGNA_02315 0.0 Click
6complement(2026055..2026939) hypothetical protein; RUMGNA_02316 0.0 Click
7complement(2027068..2027232) hypothetical protein; RUMGNA_02317 0.0 Click
8complement(2027229..2027609) PHAGE_Geobac_GBSV1: hypothetical protein GPGV1_gp27; RUMGNA_02318; phage(gi115334637) 1e-13 Click
9complement(2027610..2028230) PHAGE_Geobac_E2: putative major capsid protein; RUMGNA_02319; phage(gi148747739) 1e-29 Click
10complement(2028234..2028551) PHAGE_Geobac_E2: hypothetical protein GBVE2_gp011; RUMGNA_02320; phage(gi148747738) 2e-11 Click
11complement(2028551..2028931) PHAGE_Geobac_E2: hypothetical protein GBVE2_gp010; RUMGNA_02321; phage(gi148747737) 7e-18 Click
12complement(2028936..2029265) PHAGE_Geobac_E2: putative head-tail adaptor; RUMGNA_02322; phage(gi148747735) 8e-09 Click
13complement(2029265..2029540) hypothetical protein; RUMGNA_02323 0.0 Click
14complement(2029550..2030755) PHAGE_Entero_phiP27: putative major capsid protein; RUMGNA_02324; phage(gi18249904) 1e-39 Click
15complement(2030770..2031576) PHAGE_Geobac_E2: putative Clp peptidase; RUMGNA_02325; phage(gi148747731) 1e-45 Click
16complement(2031573..2032871) PHAGE_Klebsi_phiKO2: putative portal protein; RUMGNA_02326; phage(gi46402090) 2e-74 Click
17complement(2032930..2033208) hypothetical protein; RUMGNA_02327 0.0 Click
18complement(2033295..2034842) PHAGE_Nocard_NBR1: terminase large subunit; RUMGNA_02328; phage(gi372217589) 2e-84 Click
19complement(2034842..2035279) PHAGE_Geobac_E2: putative terminase small subunit; RUMGNA_02329; phage(gi148747728) 3e-14 Click