Ruminococcus obeum ATCC 29174 , whole genome [asmbl_id: NC_000000].3624708, GC%: 41.59%



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            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 43 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1828882..830453 PHAGE_Bacill_phBC6A51: Site-specific recombinase; RUMOBE_00907; phage(gi31415812) 7e-28 Click
2complement(830499..830789) hypothetical protein; RUMOBE_00908 0.0 Click
3complement(830944..832272) PHAGE_Clostr_st: putative N-acetylmuramoyl-L-alanine amidase; RUMOBE_00909; phage(gi80159841) 6e-35 Click
4complement(832301..832639) hypothetical protein; RUMOBE_00910 0.0 Click
5complement(832636..832923) hypothetical protein; RUMOBE_00911 0.0 Click
6complement(833031..833219) hypothetical protein; RUMOBE_00912 0.0 Click
7complement(833206..834408) PHAGE_Entero_phiFL3A: PblB-like tail protein; RUMOBE_00913; phage(gi281416271) 8e-18 Click
8complement(834405..835127) PHAGE_Helico_granulovirus: hypothetical protein HaGV_gp081; RUMOBE_00914; phage(gi164519276) 6e-06 Click
9complement(835160..835354) hypothetical protein; RUMOBE_00915 0.0 Click
10835483..835743 hypothetical protein; RUMOBE_00916 0.0 Click
11835900..835995 hypothetical protein; RUMOBE_00917 0.0 Click
12836100..836195 hypothetical protein; RUMOBE_00918 0.0 Click
13complement(836198..836314) hypothetical protein; RUMOBE_00919 0.0 Click
14complement(836330..837328) PHAGE_Thermu_45: XerD-like integrase; RUMOBE_00920; phage(gi157265299) 6e-10 Click
15complement(837351..837458) hypothetical protein; RUMOBE_00921 0.0 Click
16complement(837510..838070) hypothetical protein; RUMOBE_00922 0.0 Click
17complement(838106..841237) PHAGE_Clostr_phiCTP1: hypothetical phage structural protein; RUMOBE_00923; phage(gi304360688) 4e-66 Click
18complement(841267..841641) hypothetical protein; RUMOBE_00924 0.0 Click
19complement(841651..842367) PHAGE_Clostr_phiSM101: hypothetical protein; RUMOBE_00925; phage(gi110804045) 1e-33 Click
20complement(842364..846488) PHAGE_Lister_2389: tail tape measure protein; RUMOBE_00926; phage(gi17488515) 4e-73 Click
21complement(846547..846798) hypothetical protein; RUMOBE_00927 0.0 Click
22complement(846862..846975) hypothetical protein; RUMOBE_00928 0.0 Click
23complement(847038..847463) hypothetical protein; RUMOBE_00929 0.0 Click
24complement(847515..848078) PHAGE_Lactob_c5: putative major tail protein; RUMOBE_00930; phage(gi418488164) 2e-23 Click
25complement(848093..848260) hypothetical protein; RUMOBE_00931 0.0 Click
26complement(848409..848813) PHAGE_Bacill_phIS3501: gp10 family phage protein; RUMOBE_00932; phage(gi422934334) 7e-05 Click
27complement(848800..849120) hypothetical protein; RUMOBE_00933 0.0 Click
28complement(849120..849392) hypothetical protein; RUMOBE_00934 0.0 Click
29complement(849446..850594) PHAGE_Geobac_E2: major capsid protein; RUMOBE_00935; phage(gi148747732) 7e-91 Click
30complement(850628..851299) PHAGE_Clostr_phiSM101: putative endopeptidase; RUMOBE_00936; phage(gi110804048) 8e-49 Click
31complement(851286..852557) PHAGE_Geobac_E2: putative portal protein; RUMOBE_00937; phage(gi148747730) 1e-123 Click
32complement(852557..854323) PHAGE_Bacill_phIS3501: terminase large subunit; RUMOBE_00938; phage(gi422934328) 2e-125 Click
33complement(854320..854808) PHAGE_Bacill_phIS3501: terminase small subunit; RUMOBE_00939; phage(gi422934327) 3e-14 Click
34complement(854896..855363) PHAGE_Bacill_phIS3501: HNH endonuclease domain protein; RUMOBE_00940; phage(gi422934326) 4e-11 Click
35complement(855404..856243) PHAGE_Strept_SM1: gp11; RUMOBE_00941; phage(gi32469442) 3e-15 Click
36complement(856467..856889) hypothetical protein; RUMOBE_00943 0.0 Click
37856792..857337 hypothetical protein; RUMOBE_00942 0.0 Click
38complement(856894..857082) hypothetical protein; RUMOBE_00944 0.0 Click
39complement(857192..857479) hypothetical protein; RUMOBE_00945 0.0 Click
40complement(857476..857943) hypothetical protein; RUMOBE_00946 0.0 Click
41complement(857936..858094) hypothetical protein; RUMOBE_00947 0.0 Click
42complement(858106..858468) PHAGE_Lactob_c5: hypothetical protein; RUMOBE_00948; phage(gi418488180) 7e-08 Click
43complement(858531..859763) PHAGE_Clostr_phiMMP02: ASCH domain protein; RUMOBE_00949; phage(gi414090436) 8e-08 Click

Region 2, total : 28 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1916486..917223 PHAGE_Lactob_LF1: hypothetical protein; RUMOBE_01031; phage(gi418489429) 2e-27 Click
2917204..918787 hypothetical protein; RUMOBE_01032 0.0 Click
3918750..919256 hypothetical protein; RUMOBE_01033 0.0 Click
4919263..920000 PHAGE_Lactob_LF1: DNA replication protein; RUMOBE_01034; phage(gi418489431) 2e-39 Click
5920016..920870 PHAGE_Lactob_c5: putative DnaC; RUMOBE_01035; phage(gi418488188) 5e-20 Click
6920890..921303 PHAGE_Entero_mEp213: prophage repressor; RUMOBE_01036; phage(gi428782641) 3e-06 Click
7921300..921599 PHAGE_Clostr_CD119: hypothetical protein CDBPCV119_gp06; RUMOBE_01037; phage(gi90592643) 4e-06 Click
8921604..922035 PHAGE_Clostr_phiC2: putative endodeoxyribonuclease RusA; RUMOBE_01038; phage(gi134287410) 2e-29 Click
9922036..922176 hypothetical protein; RUMOBE_01039 0.0 Click
10922040..922651 hypothetical protein; RUMOBE_01040 0.0 Click
11922667..922945 hypothetical protein; RUMOBE_01041 0.0 Click
12922960..923292 PHAGE_Halovi_HVTV_1: MazG-like protein; RUMOBE_01042; phage(gi443404610) 3e-10 Click
13923405..923857 hypothetical protein; RUMOBE_01043 0.0 Click
14924204..924956 PHAGE_Lactob_c5: putative ParB nuclease; RUMOBE_01044; phage(gi418488153) 4e-72 Click
15924940..925791 PHAGE_Lactob_c5: hypothetical protein; RUMOBE_01045; phage(gi418488154) 1e-45 Click
16925760..926638 PHAGE_Lactob_c5: hypothetical protein; RUMOBE_01046; phage(gi418488154) 3e-60 Click
17926610..927599 PHAGE_Pelagi_HTVC008M: hypothetical protein; RUMOBE_01047; phage(gi460042594) 2e-07 Click
18927760..928131 hypothetical protein; RUMOBE_01048 0.0 Click
19928118..929527 PHAGE_Entero_phiEf11: putative phage terminase B protein; RUMOBE_01049; phage(gi282598712) 3e-102 Click
20929531..931114 PHAGE_Vibrio_SIO_2: capsid portal protein; RUMOBE_01050; phage(gi371496385) 1e-29 Click
21931104..932141 PHAGE_Natria_PhiCh1: capsid protein gpC; RUMOBE_01051; phage(gi22091111) 1e-06 Click
22932138..933565 PHAGE_Methan_psiM100: putative structural protein; RUMOBE_01052; phage(gi11863104) 2e-21 Click
23933589..934527 PHAGE_Natria_PhiCh1: capsid protein gpE; RUMOBE_01053; phage(gi22091115) 4e-16 Click
24934579..934950 hypothetical protein; RUMOBE_01054 0.0 Click
25934966..935358 hypothetical protein; RUMOBE_01055 0.0 Click
26935378..935767 hypothetical protein; RUMOBE_01056 0.0 Click
27935778..936137 hypothetical protein; RUMOBE_01057 0.0 Click
28936137..936622 PHAGE_Lactob_KC5a: hypothetical protein; RUMOBE_01058; phage(gi90592617) 2e-08 Click

Region 3, total : 27 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1complement(1471536..1473050) PHAGE_Strept_Abc2: tail protein; RUMOBE_01722; phage(gi281416402) 5e-12 Click
2complement(1473047..1474753) PHAGE_Clostr_phiCTP1: hypothetical phage structural protein; RUMOBE_01723; phage(gi304360688) 2e-40 Click
3complement(1474768..1475466) PHAGE_Clostr_phiSM101: hypothetical protein; RUMOBE_01724; phage(gi110804045) 9e-19 Click
4complement(1475470..1479156) PHAGE_Staphy_phi13: tail length tape measure protein; RUMOBE_01725; phage(gi29028708) 3e-137 Click
5complement(1479174..1479689) hypothetical protein; RUMOBE_01726 0.0 Click
6complement(1479689..1480039) PHAGE_Clostr_PhiS63: gp12; RUMOBE_01727; phage(gi388570641) 9e-08 Click
7complement(1480057..1480668) PHAGE_Clostr_PhiS63: gp11; RUMOBE_01728; phage(gi388570640) 6e-21 Click
8complement(1480671..1480790) hypothetical protein; RUMOBE_01729 0.0 Click
9complement(1481032..1481463) PHAGE_Clostr_PhiS63: gp9; RUMOBE_01730; phage(gi388570638) 4e-21 Click
10complement(1481479..1481802) PHAGE_Clostr_PhiS63: gp8; RUMOBE_01731; phage(gi388570637) 8e-20 Click
11complement(1481804..1482091) hypothetical protein; RUMOBE_01732 0.0 Click
12complement(1482112..1483353) PHAGE_Bacill_WBeta: putative major capsid protein; RUMOBE_01733; phage(gi85701384) 3e-79 Click
13complement(1483367..1484125) PHAGE_Bacill_BtCS33: ATP-dependent endopeptidase clp proteolytic subunit clpP; RUMOBE_01734; phage(gi392972714) 8e-46 Click
14complement(1484115..1485488) PHAGE_Geobac_E2: putative portal protein; RUMOBE_01735; phage(gi148747730) 2e-130 Click
15complement(1485436..1485540) hypothetical protein; RUMOBE_01736 0.0 Click
16complement(1485537..1487276) PHAGE_Clostr_phiSM101: putative phage terminase, large subunit; RUMOBE_01737; phage(gi110804033) 4e-174 Click
17complement(1487284..1487811) PHAGE_Bacill_phi105: hypothetical protein phi105_01; RUMOBE_01738; phage(gi22854994) 2e-37 Click
18complement(1487935..1488303) PHAGE_Clostr_PhiS63: gp43; RUMOBE_01739; phage(gi388570669) 1e-08 Click
19complement(1488634..1489125) PHAGE_Clostr_PhiS63: gp40; RUMOBE_01740; phage(gi388570666) 6e-25 Click
20complement(1489150..1489767) hypothetical protein; RUMOBE_01741 0.0 Click
21complement(1489791..1490225) PHAGE_Strept_5093: single-stranded DNA binding protein; RUMOBE_01742; phage(gi238801886) 8e-25 Click
22complement(1490334..1490435) hypothetical protein; RUMOBE_01743 0.0 Click
23complement(1490414..1490878) hypothetical protein; RUMOBE_01744 0.0 Click
24complement(1490850..1491041) hypothetical protein; RUMOBE_01745 0.0 Click
25complement(1491038..1491415) hypothetical protein; RUMOBE_01746 0.0 Click
26complement(1491430..1491702) hypothetical protein; RUMOBE_01747 0.0 Click
27complement(1491702..1492931) PHAGE_Human__8: LANA; RUMOBE_01748; phage(gi139472804) 3e-06 Click

Region 4, total : 37 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
11782523..1782540 attL    CGTTTCGTTATATGAAGG 0.0 Click
21787420..1789321 PHAGE_Mycoba_BPs: integrase; RUMOBE_02123; phage(gi189043119) 5e-05 Click
31789318..1790286 PHAGE_Strept_PH15: putative integrase; RUMOBE_02124; phage(gi190151416) 1e-04 Click
41790276..1791313 PHAGE_Achole_L2: integrase; RUMOBE_02125; phage(gi9626516) 4e-11 Click
51791386..1792717 hypothetical protein; RUMOBE_02126 0.0 Click
61792714..1792974 hypothetical protein; RUMOBE_02127 0.0 Click
71792964..1793848 hypothetical protein; RUMOBE_02128 0.0 Click
81793852..1794160 hypothetical protein; RUMOBE_02129 0.0 Click
91794126..1794374 hypothetical protein; RUMOBE_02130 0.0 Click
101794482..1794736 hypothetical protein; RUMOBE_02131 0.0 Click
111794733..1795527 hypothetical protein; RUMOBE_02132 0.0 Click
121795645..1796250 hypothetical protein; RUMOBE_02133 0.0 Click
131796254..1796931 hypothetical protein; RUMOBE_02134 0.0 Click
141796931..1798412 PHAGE_Plankt_PaV_LD: ABC transporter; RUMOBE_02135; phage(gi371496158) 4e-16 Click
151798485..1798601 hypothetical protein; RUMOBE_02136 0.0 Click
161798535..1800343 PHAGE_Bacill_SPBc2: ABC transporter; RUMOBE_02137; phage(gi9630145) 6e-20 Click
171800336..1802084 PHAGE_Bacill_SPBc2: ABC transporter; RUMOBE_02138; phage(gi9630145) 7e-29 Click
181802101..1802571 hypothetical protein; RUMOBE_02139 0.0 Click
191802695..1802871 hypothetical protein; RUMOBE_02140 0.0 Click
201802960..1803250 hypothetical protein; RUMOBE_02141 0.0 Click
21complement(1803192..1803470) PHAGE_Clostr_PhiS63: gp36; RUMOBE_02142; phage(gi388570662) 4e-07 Click
22complement(1803475..1803801) PHAGE_Feline_virus: pol polyprotein; RUMOBE_02143; phage(gi9626703) 4e-14 Click
23complement(1803878..1804657) PHAGE_Acidia_1: putative thymidylate synthase; RUMOBE_02144; phage(gi159341089) 3e-05 Click
24complement(1804644..1804970) hypothetical protein; RUMOBE_02145 0.0 Click
25complement(1805000..1806553) hypothetical protein; RUMOBE_02146 0.0 Click
26complement(1806531..1806944) hypothetical protein; RUMOBE_02147 0.0 Click
271807394..1808344 hypothetical protein; RUMOBE_02148 0.0 Click
281808359..1809000 PHAGE_Microm_12T: hypothetical protein; RUMOBE_02149; phage(gi472342811) 2e-05 Click
291809017..1809121 hypothetical protein; RUMOBE_02150 0.0 Click
301809072..1809818 hypothetical protein; RUMOBE_02151 0.0 Click
311809829..1810773 hypothetical protein; RUMOBE_02152 0.0 Click
321810799..1811563 hypothetical protein; RUMOBE_02153 0.0 Click
331811581..1812072 hypothetical protein; RUMOBE_02154 0.0 Click
341812127..1812882 hypothetical protein; RUMOBE_02155 0.0 Click
351813059..1813076 attR    CGTTTCGTTATATGAAGG 0.0 Click
361813119..1813295 PHAGE_Bacill_SPP1: hypothetical protein SPP1p083; RUMOBE_02156; phage(gi22855124) 5e-05 Click
371813304..1813414 hypothetical protein; RUMOBE_02157 0.0 Click
381813415..1814404 hypothetical protein; RUMOBE_02158 0.0 Click
391814352..1815797 PROPHAGE_Mesorh_MAFF303099: bacteriophage integrase; RUMOBE_02159; phage(gi13470699) 3e-24 Click