Vibrio cholerae 2740-80 , whole genome shotgun [asmbl_id: NC_000000].3945478, GC%: 47.58%



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            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 15 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1complement(359113..359319) PHAGE_Entero_P4: transcriptional regulator; VC274080_1837; phage(gi9627517) 3e-09 Click
2359433..359909 DNA repair protein RadC, putative; VC274080_1838 0.0 Click
3359912..360043 hypothetical protein; VC274080_1839 0.0 Click
4complement(360139..360834) hypothetical protein; VC274080_1840 0.0 Click
5complement(360831..361703) PHAGE_Entero_Sf6: putative transposase OrfB; VC274080_1841; phage(gi41057343) 3e-115 Click
6complement(361700..362044) PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; VC274080_1842; phage(gi24373865) 7e-08 Click
7complement(362051..363091) PHAGE_Escher_D108: tail assembly protein; VC274080_1843; phage(gi281199687) 2e-27 Click
8complement(363226..363585) PHAGE_Entero_Mu: hypothetical protein Mup41; VC274080_1844; phage(gi9633532) 2e-09 Click
9complement(363634..364011) hypothetical protein; VC274080_1845 0.0 Click
10complement(364066..364644) hypothetical protein; VC274080_1846 0.0 Click
11complement(364663..364983) transcriptional regulator, putative; VC274080_1847 0.0 Click
12complement(364970..365344) PHAGE_Entero_Mu: Mor; VC274080_1848; phage(gi9633507) 3e-07 Click
13complement(366154..366615) hypothetical protein; VC274080_1849 0.0 Click
14complement(366618..367769) PHAGE_Pseudo_B3: putative transposase B subunit; VC274080_1850; phage(gi56692579) 1e-45 Click
15complement(367699..369456) PHAGE_Pseudo_B3: putative transposase A subunit; VC274080_1851; phage(gi56692580) 2e-93 Click

Region 2, total : 52 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1complement(2005857..2006393) PHAGE_Vibrio_vB_VchM_138: putative tail-fiber protein; VC274080_2684; phage(gi422936603) 8e-32 Click
2complement(2006393..2007244) PHAGE_Vibrio_vB_VchM_138: putative tail-fiber protein; VC274080_2683; phage(gi422936602) 5e-66 Click
3complement(2007244..2007831) PHAGE_Entero_Mu: hypothetical protein Mup48; VC274080_2682; phage(gi9633539) 7e-17 Click
4complement(2007816..2008883) PHAGE_Entero_Mu: hypothetical protein Mup47; VC274080_2681; phage(gi9633538) 1e-45 Click
5complement(2008873..2009322) PHAGE_Entero_Mu: hypothetical protein Mup46; VC274080_2680; phage(gi9633537) 3e-19 Click
6complement(2009325..2009939) PHAGE_Entero_Mu: putative baseplate assembly protein; VC274080_2679; phage(gi9633536) 2e-25 Click
7complement(2009936..2011015) PHAGE_Entero_Mu: putative tail protein; VC274080_2678; phage(gi9633535) 1e-50 Click
8complement(2011008..2012327) PHAGE_Entero_Mu: putative DNA circulation protein; VC274080_2677; phage(gi9633534) 4e-20 Click
9complement(2012339..2014042) PHAGE_Entero_Mu: putative tape measure protein; VC274080_2676; phage(gi9633533) 8e-38 Click
10complement(2014168..2014527) PHAGE_Entero_Mu: hypothetical protein Mup41; VC274080_2675; phage(gi9633532) 4e-08 Click
11complement(2014527..2014880) tail tube protein; VC274080_2674 0.0 Click
12complement(2014895..2016379) PHAGE_Entero_Mu: major tail subunit; VC274080_2673; phage(gi9633530) 1e-94 Click
13complement(2016382..2016582) conserved hypothetical protein; VC274080_2672 0.0 Click
14complement(2016596..2017195) conserved hypothetical protein; VC274080_2671 0.0 Click
15complement(2017192..2017734) PHAGE_Rhodob_RcapMu: virion morphogenesis protein; VC274080_2670; phage(gi356870876) 2e-10 Click
16complement(2017734..2018168) PHAGE_Entero_Mu: hypothetical protein Mup36; VC274080_2669; phage(gi9633527) 1e-07 Click
17complement(2018174..2018749) PHAGE_Europe_virus: hypothetical protein; VC274080_2668; phage(gi388260173) 3e-05 Click
18complement(2018838..2019737) PHAGE_Pseudo_JBD88a: hypothetical protein; VC274080_2667; phage(gi448244723) 9e-61 Click
19complement(2019740..2020654) PHAGE_Pseudo_JBD5: hypothetical protein; VC274080_2666; phage(gi448245023) 6e-23 Click
20complement(2021029..2021313) hypothetical protein; VC274080_2665 0.0 Click
21complement(2021313..2021948) hypothetical protein; VC274080_2664 0.0 Click
22complement(2021945..2022457) PHAGE_Entero_RB43: hypothetical protein RB43ORF128w; VC274080_2663; phage(gi66391579) 1e-30 Click
23complement(2022454..2022702) hypothetical protein; VC274080_2662 0.0 Click
24complement(2022714..2023487) PHAGE_Entero_Mu: virion morphogenesis late F orf; VC274080_2661; phage(gi9633521) 2e-35 Click
25complement(2023480..2025039) PHAGE_Haemop_SuMu: portal protein gp29; VC274080_2660; phage(gi418489080) 3e-57 Click
26complement(2025036..2026601) PHAGE_Entero_Mu: putative portal protein; VC274080_2659; phage(gi9633519) 3e-128 Click
27complement(2026602..2027168) PHAGE_Entero_Mu: hypothetical protein Mup27; VC274080_2658; phage(gi9633518) 3e-32 Click
28complement(2027180..2027470) PHAGE_Entero_Mu: hypothetical protein Mup26; VC274080_2657; phage(gi9633517) 6e-23 Click
29complement(2027479..2027778) conserved hypothetical protein; VC274080_2656 0.0 Click
30complement(2027778..2028008) PHAGE_Halomo_1: hypothetical protein HAPgp41; VC274080_2655; phage(gi167832386) 2e-05 Click
31complement(2028005..2028604) conserved hypothetical protein; VC274080_2654 0.0 Click
32complement(2028580..2028867) conserved hypothetical protein; VC274080_2653 0.0 Click
33complement(2028867..2029424) PHAGE_Pelagi_HTVC008M: hypothetical protein; VC274080_2652; phage(gi460042628) 1e-17 Click
34complement(2029509..2029925) PHAGE_Entero_Mu: Mor; VC274080_2651; phage(gi9633507) 6e-19 Click
35complement(2030440..2030985) PHAGE_Entero_Mu: hypothetical protein Mup16; VC274080_2650; phage(gi9633506) 5e-26 Click
36complement(2030998..2031276) hypothetical protein; VC274080_2649 0.0 Click
37complement(2031279..2031512) conserved hypothetical protein; VC274080_2648 0.0 Click
38complement(2031592..2032122) PHAGE_Haemop_SuMu: hypothetical protein; VC274080_2647; phage(gi418489048) 9e-31 Click
39complement(2032119..2032307) PHAGE_Lactob_1: hypothetical protein lb338_phage_31; VC274080_2646; phage(gi226377661) 1e-06 Click
40complement(2032391..2032585) PHAGE_Yersin_PY54: hypothetical protein PY54p49; VC274080_2645; phage(gi33770558) 5e-08 Click
41complement(2032738..2032935) hypothetical protein; VC274080_2644 0.0 Click
42complement(2032919..2033161) conserved hypothetical protein; VC274080_2643 0.0 Click
43complement(2033154..2033426) hypothetical protein; VC274080_2642 0.0 Click
44complement(2033436..2034050) PHAGE_Burkho_KS10: hypothetical protein KS10_gp21; VC274080_2641; phage(gi198449283) 9e-47 Click
45complement(2034037..2034234) hypothetical protein; VC274080_2640 0.0 Click
46complement(2034200..2034574) conserved hypothetical protein; VC274080_2639 0.0 Click
47complement(2034584..2035153) conserved hypothetical protein; VC274080_2638 0.0 Click
48complement(2035163..2035387) hypothetical protein; VC274080_2637 0.0 Click
49complement(2035395..2036339) PHAGE_Entero_Mu: DNA transposition protein; VC274080_2636; phage(gi9633513) 7e-80 Click
50complement(2036366..2038369) PHAGE_Entero_Mu: transposase; VC274080_2635; phage(gi9633496) 4e-175 Click
51complement(2038381..2038605) PHAGE_Entero_Mu: DNA binding protein ner; VC274080_2634; phage(gi9633495) 2e-12 Click
522038758..2039495 PHAGE_Aeromo_phiO18P: putative cI repressor; VC274080_2633; phage(gi148727133) 6e-32 Click

Region 3, total : 10 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1complement(3586111..3586641) PHAGE_Campyl_CP21: putative phospholipase; VC274080_A0310; phage(gi422935151) 3e-16 Click
23586274..3586483 conserved hypothetical protein; VC274080_A0309 0.0 Click
3complement(3587162..3588499) PHAGE_Cafete_BV_PW1: hypothetical protein; VC274080_A0308; phage(gi310831380) 2e-38 Click
4complement(3588775..3588978) PROPHAGE_Escher_MG1655: IS5 transposase and trans-activator; VC274080_A0307; phage(gi16129935) 1e-24 Click
5complement(3589043..3589376) PROPHAGE_Escher_MG1655: IS5 transposase and trans-activator; VC274080_A0306; phage(gi16131377) 9e-48 Click
6complement(3589430..3589966) hypothetical protein; VC274080_2536 0.0 Click
7complement(3589969..3590526) PHAGE_Cafete_BV_PW1: putative bifunctional KDO 8-phosphate phosphatase/arabinose 5-phosphate isomerase; VC274080_2535; phage(gi310831254) 2e-19 Click
8complement(3590526..3591506) PHAGE_Entero_RB69: RB69ORF055c hypothetical protein; VC274080_2534; phage(gi32453539) 2e-22 Click
9complement(3591556..3592554) PHAGE_Lactob_Lj771: minor tail protein gp26-like protein; VC274080_2533; phage(gi163932195) 1e-05 Click
103593111..3593914 PHAGE_Plankt_PaV_LD: ABC transporter; VC274080_2532; phage(gi371496158) 1e-22 Click