Listeria monocytogenes FSL J1-175 .1, whole genome shotgun [asmbl_id: NC_000000].2866484, GC%: 37.87%



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            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 26 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1192734..193144 PHAGE_Staphy_42E: ORF012; PP_00203; phage(gi66395520) 4e-05 Click
2complement(193214..193963) hypothetical protein LM5578_2887 [Listeria monocytogenes 08-5578] gi|284803130|ref|YP_003414995.1|; PP_00204 8e-138 Click
3194157..196505 PROPHAGE_Pseudo_PAO1: coat protein A of bacteriophage Pf1; PP_00205; phage(gi15595921) 2e-07 Click
4complement(196543..197271) PHAGE_Bacill_SPP1: hypothetical protein SPP1p051; PP_00206; phage(gi22855096) 5e-37 Click
5complement(197252..197674) PHAGE_Bacill_WBeta: phage holin; PP_00207; phage(gi85701395) 5e-32 Click
6complement(197693..198229) PHAGE_Lister_B025: gp19; PP_00208; phage(gi157325236) 2e-13 Click
7complement(198226..198705) PHAGE_Deep_s_D6E: tail fiber protein; PP_00209; phage(gi423262345) 1e-05 Click
8complement(198720..199295) hypothetical protein LMOSLCC2482_0138 [Listeria monocytogenes serotype 7 str. SLCC2482] gi|404285505|ref|YP_006692091.1|; PP_00210 6e-103 Click
9complement(199310..199609) PHAGE_Deep_s_D6E: tail fiber protein; PP_00211; phage(gi423262345) 5e-05 Click
10complement(199599..200735) PHAGE_Lister_A118: gp18; PP_00212; phage(gi16798801) 7e-48 Click
11complement(200745..201563) PHAGE_Lister_A118: gp17; PP_00213; phage(gi16798800) 3e-44 Click
12complement(201560..203428) PHAGE_Propio_ATCC29399B_C: putative tape measure; PP_00214; phage(gi410507479) 3e-48 Click
13complement(203415..203819) PHAGE_Strept_5: hypothetical protein SpyM3_1314; PP_00215; phage(gi28876396) 2e-24 Click
14complement(203861..204163) PHAGE_Strept_5: hypothetical protein SpyM3_1315; PP_00216; phage(gi28876397) 9e-08 Click
15complement(204211..204723) PHAGE_Clostr_phi8074_B1: putative phage major tail protein; PP_00217; phage(gi431810369) 5e-19 Click
16complement(204736..205128) antigen B [Listeria monocytogenes serotype 7 str. SLCC2482] gi|404285497|ref|YP_006692083.1|; PP_00218 8e-67 Click
17complement(205405..205821) PHAGE_Lister_A118: gp66; PP_00219; phage(gi16798853) 5e-21 Click
18complement(205833..206261) PHAGE_Lister_A118: gp61; PP_00220; phage(gi16798848) 3e-16 Click
19206478..206813 PHAGE_Staphy_92: ORF019; PP_00221; phage(gi66396425) 4e-15 Click
20206819..207271 PHAGE_Lister_A118: gp35; PP_00222; phage(gi16798818) 6e-29 Click
21207490..208185 hypothetical protein LMOSLCC2482_0125 [Listeria monocytogenes serotype 7 str. SLCC2482] gi|404285492|ref|YP_006692078.1|; PP_00223 3e-127 Click
22complement(208155..208853) hypothetical protein LM5578_2907 [Listeria monocytogenes 08-5578] gi|284803150|ref|YP_003415015.1|; PP_00224 3e-130 Click
23complement(208969..210084) PHAGE_Acanth_moumouvirus: putative triacylglycerol lipase; PP_00225; phage(gi441432487) 2e-20 Click
24complement(210119..210952) AraC family transcriptional regulator [Listeria monocytogenes serotype 7 str. SLCC2482] gi|404285489|ref|YP_006692075.1|; PP_00226 5e-158 Click
25211095..212837 PHAGE_Bacill_SPBc2: ABC transporter; PP_00227; phage(gi9630145) 2e-30 Click
26212830..214611 PHAGE_Bacill_SPBc2: ABC transporter; PP_00228; phage(gi9630145) 4e-35 Click

Region 2, total : 22 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1739216..740250 PHAGE_Clostr_phiCD38_2: hypothetical protein; PP_00781; phage(gi333798122) 3e-11 Click
2740259..740270 attL    TCATAATATAAA 0.0 Click
3complement(740313..740402) tRNA 0.0 Click
4complement(740483..741628) PROPHAGE_Oceano_HTE831: integrase; PP_00782; phage(gi23097608) 2e-72 Click
5complement(741754..742368) PHAGE_Lister_2389: Gp25 protein; PP_00783; phage(gi17488530) 6e-08 Click
6complement(742419..742871) PHAGE_Lister_2389: Gp26 protein; PP_00784; phage(gi17488531) 4e-62 Click
7complement(742888..743208) PHAGE_Lister_2389: Rep protein; PP_00785; phage(gi17488532) 3e-54 Click
8743475..743666 PHAGE_Lister_2389: Gp28 protein; PP_00786; phage(gi17488533) 4e-23 Click
9743685..743873 hypothetical; PP_00787 0.0 Click
10743898..744083 PHAGE_Lister_2389: Gp30 protein; PP_00788; phage(gi17488535) 2e-21 Click
11744549..744689 hypothetical protein [Listeria monocytogenes FSL R2-561] gi|386050159|ref|YP_005968150.1|; PP_00789 1e-17 Click
12744656..746041 PHAGE_Strept_5093: putative DNA methylase; PP_00790; phage(gi238801891) 1e-90 Click
13746052..746267 PHAGE_Lister_A500: gp48; PP_00791; phage(gi157325007) 6e-17 Click
14746258..746593 PHAGE_Lister_A118: gp59; PP_00792; phage(gi16798846) 2e-11 Click
15746608..747024 PHAGE_Lister_2389: Gp37 protein; PP_00793; phage(gi17488542) 8e-29 Click
16747021..747482 PHAGE_Brocho_A9: gp39; PP_00794; phage(gi327197682) 8e-16 Click
17747482..747697 hypothetical; PP_00795 0.0 Click
18747697..747885 PHAGE_Lister_2389: Gp39 protein; PP_00796; phage(gi17488544) 7e-19 Click
19747886..748320 PHAGE_Lister_2389: Gp40 protein; PP_00797; phage(gi17488545) 1e-77 Click
20complement(748398..749012) RluD subfamily ribosomal large subunit pseudouridine synthase [Listeria monocytogenes serotype 7 str. SLCC2482] gi|404287677|ref|YP_006694263.1|; PP_00798 1e-114 Click
21complement(749034..749594) Ada regulatory protein [Listeria monocytogenes serotype 4b str. F2365] gi|46908476|ref|YP_014865.1|; PP_00799 4e-107 Click
22749740..750222 PHAGE_Acanth_mimivirus: probable methylated-DNA--protein-cysteine methyltransferase; PP_00800; phage(gi311978100) 9e-21 Click
23750315..750710 GntR family transcriptional regulator [Listeria monocytogenes serotype 7 str. SLCC2482] gi|404287674|ref|YP_006694260.1|; PP_00801 4e-66 Click
24750700..751578 PHAGE_Amsact_: putative ATP-binding cassette transporter; PP_00802; phage(gi9964444) 2e-10 Click
25753184..753195 attR    TCATAATATAAA 0.0 Click

Region 3, total : 26 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1979115..980023 PHAGE_Cyanop_S_SSM4: phosphate-binding protein PstS; PP_01014; phage(gi472343380) 8e-14 Click
2980090..981040 phosphate ABC transporter permease [Listeria monocytogenes serotype 7 str. SLCC2482] gi|404287869|ref|YP_006694455.1|; PP_01015 1e-170 Click
3981037..981921 hypothetical protein LM5578_2692 [Listeria monocytogenes 08-5578] gi|284802935|ref|YP_003414800.1|; PP_01016 3e-161 Click
4complement(982081..984141) PHAGE_Lister_B025: Tmp; PP_01017; phage(gi157325231) 0.0 Click
5complement(984156..984305) PHAGE_Lister_B025: gp13; PP_01018; phage(gi157325230) 7e-23 Click
6complement(984356..984688) PHAGE_Lister_B025: gp12; PP_01019; phage(gi157325229) 3e-58 Click
7complement(984760..985347) PHAGE_Lister_B025: Tsh; PP_01020; phage(gi157325228) 4e-107 Click
8complement(985369..985752) PHAGE_Lister_B025: gp10; PP_01021; phage(gi157325227) 5e-67 Click
9complement(985749..986150) PHAGE_Lister_B025: gp9; PP_01022; phage(gi157325225) 9e-69 Click
10complement(986147..986512) PHAGE_Lister_B025: gp8; PP_01023; phage(gi157325226) 9e-64 Click
11complement(986496..986795) PHAGE_Lister_B025: gp7; PP_01024; phage(gi157325224) 5e-51 Click
12complement(986805..986975) PHAGE_Lister_B025: gp6; PP_01025; phage(gi157325223) 5e-24 Click
13complement(986982..988133) PHAGE_Lister_B025: Cps; PP_01026; phage(gi157325222) 0.0 Click
14complement(988160..988909) PHAGE_Lister_B025: gp4; PP_01027; phage(gi157325221) 2e-139 Click
15complement(988906..990036) PHAGE_Lister_B025: gp3; PP_01028; phage(gi157325220) 0.0 Click
16990087..990476 PHAGE_Staphy_phiN315: hypothetical protein SA1800; PP_01029; phage(gi30043979) 2e-18 Click
17complement(990486..992048) PHAGE_Lister_B025: putative terminase large subunit; PP_01030; phage(gi157325219) 0.0 Click
18complement(992126..992425) PHAGE_Lister_B025: gp1; PP_01031; phage(gi157325218) 5e-49 Click
19complement(992533..992847) PHAGE_Lister_B025: gp65; PP_01032; phage(gi157325282) 4e-61 Click
20complement(993311..994054) hypothetical protein LM5578_1348 [Listeria monocytogenes 08-5578] gi|284801595|ref|YP_003413460.1|; PP_01033 4e-139 Click
21complement(994152..994577) PHAGE_Lister_B025: gp63; PP_01034; phage(gi157325280) 2e-33 Click
22complement(994590..994820) hypothetical protein LMOSLCC2479_1267 [Listeria monocytogenes SLCC2479] gi|405758254|ref|YP_006687530.1|; PP_01035 4e-35 Click
23complement(994817..995347) PHAGE_Lister_B025: gp62; PP_01036; phage(gi157325279) 1e-65 Click
24complement(995461..995775) PHAGE_Lister_B025: gp61; PP_01037; phage(gi157325278) 4e-55 Click
25996161..996418 myo-inositol catabolism protein [Listeria monocytogenes serotype 7 str. SLCC2482] gi|404285750|ref|YP_006692336.1|; PP_01038 2e-38 Click
26996428..998347 PHAGE_Ostreo_2: putative acetolactate synthase large subunit; PP_01039; phage(gi314055125) 8e-26 Click