Burkholderia dolosa AUO158 .1, whole genome shotgun sequence. [asmbl_id: NC_000000].6247594, GC%: 66.81%



Text file for download

            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 33 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
11131456..1132274 PHAGE_Pseudo_AF: putative DNA primase\helicase; PP_01188; phage(gi431810342) 7e-59 Click
2complement(1132523..1132702) hypothetical; PP_01189 0.0 Click
31133484..1133639 hypothetical; PP_01190 0.0 Click
41133697..1133906 hypothetical; PP_01191 0.0 Click
51133967..1134464 PHAGE_Roseob_1: hypothetical protein RDJLphi1_gp75; PP_01192; phage(gi331028129) 3e-06 Click
61134476..1134736 hypothetical; PP_01193 0.0 Click
71134815..1134982 hypothetical; PP_01194 0.0 Click
81134979..1136598 PHAGE_Pelagi_HTVC010P: head-tail connector protein; PP_01195; phage(gi460042262) 3e-62 Click
91136182..1136193 attL    CCGCTGATCGCG 0.0 Click
101136595..1136846 hypothetical protein YE105_C1348 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|332160970|ref|YP_004297547.1|; PP_01196 8e-08 Click
111136848..1137273 PHAGE_Ralsto_RSB1: putative Type II and type III secretion system protein precursor; PP_01197; phage(gi197935895) 6e-09 Click
121137401..1138231 PHAGE_Ectoca_1: hypothetical protein Esvgp177; PP_01198; phage(gi19343415) 3e-06 Click
131138475..1139362 PHAGE_Pelagi_HTVC010P: putative major capsid protein; PP_01199; phage(gi460042266) 7e-31 Click
141139429..1139890 hypothetical; PP_01200 0.0 Click
151140082..1140567 PHAGE_Burkho_BcepC6B: hypothetical protein BcepC6B_gp11; PP_01201; phage(gi48697201) 1e-11 Click
161140571..1142970 PHAGE_Pelagi_HTVC010P: putative tail tubular protein B; PP_01202; phage(gi460042270) 4e-57 Click
171142975..1143427 PHAGE_Entero_UAB_Phi78: hypothetical protein; PP_01203; phage(gi456351056) 2e-12 Click
181143420..1143920 PHAGE_Burkho_BcepC6B: hypothetical protein BcepC6B_gp14; PP_01204; phage(gi48697204) 9e-11 Click
191144035..1146029 PHAGE_Burkho_BcepC6B: hypothetical protein BcepC6B_gp15; PP_01205; phage(gi48697205) 1e-125 Click
201146031..1148325 PHAGE_Burkho_BcepC6B: SLT domain-containing tail structural protein; PP_01206; phage(gi48697206) 0.0 Click
211148329..1150926 PHAGE_Burkho_BcepC6B: hypothetical protein BcepC6B_gp17; PP_01207; phage(gi48697207) 0.0 Click
221150923..1151417 PHAGE_Xantho_Xp10: endonuclease of the HNH family with predicted DNA-binding module at C-terminus; PP_01208; phage(gi32128470) 9e-32 Click
231151541..1151819 hypothetical; PP_01209 0.0 Click
241151806..1153302 PHAGE_Klebsi_K11: gp19; PP_01210; phage(gi194100463) 6e-16 Click
251153488..1155854 PHAGE_Burkho_BcepC6B: putative tail fiber protein; PP_01211; phage(gi48697208) 1e-69 Click
261155867..1156202 PHAGE_Burkho_BcepC6B: putative holin protein; PP_01212; phage(gi48697210) 2e-53 Click
271156199..1156477 PHAGE_Burkho_BcepC6B: putative holin protein; PP_01213; phage(gi48697211) 2e-45 Click
281156464..1156883 PHAGE_Klebsi_KP27: baseplate hub subunit and tail lysozyme; PP_01214; phage(gi448260737) 2e-10 Click
291157374..1158345 PHAGE_Burkho_BcepC6B: hypothetical membrane-localized protein; PP_01215; phage(gi48697209) 4e-66 Click
30complement(1158342..1159322) PHAGE_Entero_Sf6: gene 15 protein; PP_01216; phage(gi41057293) 1e-23 Click
311159231..1159242 attR    CCGCTGATCGCG 0.0 Click
32complement(1159573..1160775) PROPHAGE_Escher_CFT073: putative prophage integrase; PP_01217; phage(gi26250313) 2e-91 Click
33complement(1160945..1161019) tRNA 0.0 Click
34complement(1161184..1161366) rubredoxin [Burkholderia cenocepacia J2315] gi|206560817|ref|YP_002231582.1|; PP_01218 2e-30 Click
351161411..1161995 hypothetical protein Bcen_1750 [Burkholderia cenocepacia AU 1054] gi|107023299|ref|YP_621626.1|; PP_01219 1e-78 Click
361162221..1164170 PHAGE_Parame_AR158: hypothetical protein AR158_C788L; PP_01220; phage(gi157953978) 2e-26 Click

Region 2, total : 85 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
11971681..1971729 attL    TGGGGTGGCTGATGGGACTCGAACCCACGACAACAGGAATCACAATCCT 0.0 Click
2complement(1972787..1973482) PHAGE_Burkho_phiE125: hypothetical protein phiE125p33; PP_02057; phage(gi17975194) 8e-95 Click
31973620..1974003 PHAGE_Burkho_KS9: hypothetical protein gp27; PP_02058; phage(gi255033759) 1e-13 Click
41974078..1974515 hypothetical; PP_02059 0.0 Click
5complement(1974528..1975004) PHAGE_Burkho_Bcep176: gp56; PP_02060; phage(gi77864681) 2e-72 Click
6complement(1975004..1975465) PHAGE_Burkho_Bcep176: gp58; PP_02061; phage(gi77864683) 2e-76 Click
7complement(1975494..1975676) hypothetical protein GBP346_A2694 [Burkholderia pseudomallei MSHR346] gi|237812934|ref|YP_002897385.1|; PP_02062 5e-13 Click
81976845..1976958 hypothetical; PP_02063 0.0 Click
9complement(1977187..1978179) PHAGE_Burkho_BcepMu: gp52; PP_02064; phage(gi48696962) 2e-56 Click
10complement(1978243..1978944) PHAGE_Vibrio_vB_VchM_138: hypothetical protein; PP_02065; phage(gi422936601) 1e-08 Click
11complement(1978908..1980089) PHAGE_Vibrio_vB_VchM_138: putative baseplate protein; PP_02066; phage(gi422936600) 5e-40 Click
12complement(1980086..1980439) PHAGE_Vibrio_vB_VchM_138: hypothetical protein; PP_02067; phage(gi422936599) 6e-12 Click
13complement(1980444..1980599) PHAGE_Xantho_CP1: hypothetical protein; PP_02068; phage(gi431811041) 2e-05 Click
14complement(1980929..1981678) PHAGE_Vibrio_vB_VchM_138: putative baseplate protein; PP_02070; phage(gi422936598) 5e-18 Click
151981682..1982059 hypothetical protein BCAL2969a [Burkholderia cenocepacia J2315] gi|206561311|ref|YP_002232076.1|; PP_02069 6e-06 Click
16complement(1982056..1983024) PHAGE_Vibrio_vB_VchM_138: hypothetical protein; PP_02071; phage(gi422936597) 1e-20 Click
17complement(1983021..1983338) PHAGE_Psychr_pOW20_A: hypothetical protein; PP_02072; phage(gi472339842) 3e-07 Click
18complement(1983338..1983913) PHAGE_Psychr_pOW20_A: hypothetical protein; PP_02073; phage(gi472339841) 3e-11 Click
19complement(1983910..1985904) PHAGE_Aeromo_vB_AsaM_56: putative tail-fiber/lysozyme protein; PP_02074; phage(gi422937553) 2e-17 Click
20complement(1985897..1986028) hypothetical; PP_02075 0.0 Click
21complement(1986088..1986657) putative bacteriophage protein [Acinetobacter baumannii MDR-ZJ06] gi|384143849|ref|YP_005526559.1|; PP_02076 2e-17 Click
22complement(1986666..1987025) PHAGE_Xantho_CP1: hypothetical protein; PP_02077; phage(gi431811041) 7e-24 Click
23complement(1987163..1987603) PHAGE_Pseudo_vB_PaeM_C2_10_Ab1: hypothetical protein; PP_02078; phage(gi431809991) 9e-05 Click
24complement(1987619..1989094) PHAGE_Aggreg_S1249: hypothetical protein; PP_02079; phage(gi273809558) 2e-71 Click
251989119..1989691 PHAGE_Xantho_Xop411: p55.1; PP_02080; phage(gi148727230) 5e-17 Click
26complement(1989679..1990257) hypothetical protein [Frateuria aurantia DSM 6220] gi|383316757|ref|YP_005377599.1|; PP_02081 4e-37 Click
27complement(1990262..1990633) putative bacteriophage protein [Acinetobacter baumannii MDR-ZJ06] gi|384143853|ref|YP_005526563.1|; PP_02082 4e-29 Click
28complement(1990695..1991177) PHAGE_Vibrio_vB_VchM_138: hypothetical protein; PP_02083; phage(gi422936584) 3e-09 Click
29complement(1991205..1991588) PHAGE_Burkho_BcepB1A: gp21; PP_02084; phage(gi48697511) 2e-08 Click
30complement(1991648..1992133) PHAGE_Salmon_1: putative bacteriophage tail fiber protein; Lambda gpN homolog; PP_02085; phage(gi169257204) 1e-05 Click
31complement(1992135..1993226) PHAGE_Vibrio_vB_VchM_138: putative major capsid protein; PP_02086; phage(gi422936575) 3e-14 Click
32complement(1993294..1993800) bacteriophage protein [Pectobacterium carotovorum subsp. carotovorum PCC21] gi|403058317|ref|YP_006646534.1|; PP_02087 7e-25 Click
33complement(1993810..1995261) PHAGE_Iodoba_phiPLPE: gp27 putative head protein; PP_02088; phage(gi197085641) 2e-18 Click
34complement(1995433..1995726) PHAGE_Rhodob_RcapMu: hypothetical protein; PP_02089; phage(gi356870872) 1e-25 Click
35complement(1995728..1996483) PROPHAGE_Deinoc_R1: head morphogenesis protein, putative; PP_02090; phage(gi15807765) 7e-18 Click
36complement(1996480..1997946) PHAGE_Vibrio_vB_VchM_138: putative portal protein; PP_02091; phage(gi422936563) 6e-41 Click
37complement(1997967..1999508) PHAGE_Vibrio_CP_T1: putative TerL large-subunit terminase; PP_02092; phage(gi418489210) 1e-110 Click
38complement(1999471..1999950) PHAGE_Cronob_ENT47670: hypothetical protein; PP_02093; phage(gi431810521) 3e-34 Click
39complement(2000618..2000797) hypothetical; PP_02094 0.0 Click
40complement(2000922..2001353) hypothetical; PP_02095 0.0 Click
41complement(2001350..2001679) hypothetical; PP_02096 0.0 Click
42complement(2001690..2002160) PHAGE_Pseudo_AF: putative enoddeoxyribonuclease; PP_02097; phage(gi431810354) 7e-31 Click
43complement(2002157..2002417) hypothetical; PP_02098 0.0 Click
44complement(2002414..2003457) PHAGE_Pseudo_phi297: putative DNA replication protein O; PP_02099; phage(gi374531278) 6e-35 Click
45complement(2003514..2004491) PHAGE_Burkho_phiE125: putative PAPS reductase/sulfotransferase; PP_02100; phage(gi17975219) 8e-140 Click
46complement(2004488..2004958) PHAGE_Burkho_phi1026b: gp66; PP_02101; phage(gi38707956) 2e-68 Click
47complement(2005716..2005931) hypothetical; PP_02102 0.0 Click
48complement(2005934..2006308) hypothetical; PP_02103 0.0 Click
492006475..2006855 hypothetical; PP_02104 0.0 Click
50complement(2007006..2007251) PHAGE_Entero_c_1: prophage antirepressor; PP_02105; phage(gi428781783) 4e-13 Click
512007338..2007724 PHAGE_Burkho_phiE125: putative repressor protein; PP_02106; phage(gi17975214) 2e-09 Click
522008732..2009148 hypothetical; PP_02107 0.0 Click
532009245..2009976 hypothetical; PP_02108 0.0 Click
542010025..2010378 PHAGE_Burkho_Bcep176: gp39; PP_02109; phage(gi77864664) 1e-15 Click
552010378..2010668 PHAGE_Burkho_Bcep22: Bcep22gp38; PP_02110; phage(gi38640344) 1e-25 Click
562010668..2010844 PHAGE_Burkho_Bcep176: gp41; PP_02111; phage(gi77864666) 5e-08 Click
572010841..2011011 hypothetical; PP_02112 0.0 Click
582011008..2011151 hypothetical; PP_02113 0.0 Click
592011238..2011957 PHAGE_Pseudo_phi297: hypothetical protein; PP_02114; phage(gi374531259) 2e-75 Click
602012059..2013171 PHAGE_Pseudo_phi297: putative RecT protein; PP_02115; phage(gi374531258) 2e-44 Click
612013184..2014950 PHAGE_Gifsy_1: bacteriophage side tail fiber protein; Lambda gpSft (gpN) homolog; PP_02116; phage(gi169257214) 1e-09 Click
622014947..2015582 hypothetical protein ebA15 [Aromatoleum aromaticum EbN1] gi|56475441|ref|YP_157030.1|; PP_02117 3e-07 Click
632015670..2017304 PHAGE_Ralsto_RSL1: unnamed protein product; PP_02118; phage(gi189426834) 1e-25 Click
642017433..2017762 PHAGE_Erwini_vB_EamP_S6: gp055; PP_02119; phage(gi422935894) 1e-29 Click
652017759..2017953 hypothetical; PP_02120 0.0 Click
662017955..2018437 PHAGE_Emilia_86: hypothetical protein EhV330; PP_02121; phage(gi73852804) 1e-17 Click
672018577..2018900 PHAGE_Burkho_BcepIL02: hypothetical protein BcepIL02_gp10; PP_02122; phage(gi238801626) 2e-12 Click
682018933..2019757 PHAGE_Burkho_BcepIL02: hypothetical protein BcepIL02_gp11; PP_02123; phage(gi238801627) 7e-43 Click
692019987..2021996 PHAGE_Pectob_ZF40: putative methylase; PP_02124; phage(gi422936661) 0.0 Click
702021993..2023027 PHAGE_Burkho_phiE125: putative DNA cytosine methylase; PP_02125; phage(gi17975218) 2e-135 Click
712023046..2023840 PHAGE_Pseudo_PAJU2: hypothetical protein PAJU2_gp51; PP_02126; phage(gi209552470) 1e-22 Click
722023837..2025153 PHAGE_Burkho_2: gp17, hypothetical protein; PP_02127; phage(gi134288725) 1e-14 Click
732025143..2025514 PHAGE_Burkho_phi1026b: gp39; PP_02128; phage(gi38707929) 1e-08 Click
74complement(2025517..2025726) PHAGE_Burkho_phi1026b: gp36; PP_02129; phage(gi38707926) 1e-16 Click
752025762..2026682 PHAGE_Burkho_phiE125: hypothetical protein phiE125p37; PP_02130; phage(gi17975198) 1e-127 Click
76complement(2026685..2026921) hypothetical; PP_02132 0.0 Click
772026904..2027056 hypothetical; PP_02131 0.0 Click
782027058..2027546 PHAGE_Pseudo_PAJU2: hypothetical protein PAJU2_gp42; PP_02133; phage(gi209552461) 1e-42 Click
792027576..2028253 PHAGE_Pseudo_vB_PaeS_PMG1: hypothetical protein; PP_02134; phage(gi374531705) 6e-28 Click
802028255..2028461 hypothetical; PP_02135 0.0 Click
812028458..2029483 PHAGE_Pectob_ZF40: putative integrase; PP_02136; phage(gi422936642) 5e-17 Click
82complement(2029571..2029646) tRNA 0.0 Click
832029571..2029619 attR    TGGGGTGGCTGATGGGACTCGAACCCACGACAACAGGAATCACAATCCT 0.0 Click
84complement(2029637..2030383) yjbN family TIM-barrel protein [Burkholderia cepacia GG4] gi|402566633|ref|YP_006615978.1|; PP_02137 2e-125 Click
85complement(2030498..2030749) hypothetical protein BamMC406_1489 [Burkholderia ambifaria MC40-6] gi|172060540|ref|YP_001808192.1|; PP_02138 2e-38 Click
86complement(2030815..2031012) Fe3+ ABC transporter permease [Burkholderia sp. KJ006] gi|387902161|ref|YP_006332500.1|; PP_02139 1e-26 Click
87complement(2031150..2031365) molybdenum-pterin-binding protein [Burkholderia cepacia GG4] gi|402566636|ref|YP_006615981.1|; PP_02140 1e-29 Click
88complement(2031421..2031945) PHAGE_Plankt_PaV_LD: ABC transporter; PP_02141; phage(gi371496158) 2e-17 Click