Vibrio cholerae V51 , whole genome shotgun [asmbl_id: NC_000000].3782275, GC%: 47.51%



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            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 54 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1161730..161741 attL    TGGGCTAGATTC 0.0 Click
2complement(170270..171064) PHAGE_Haemop_Aaphi23: putative CI protein; PP_00152; phage(gi31544010) 7e-48 Click
3171359..171811 PHAGE_Entero_mEp390: hypothetical protein; PP_00153; phage(gi428782704) 7e-24 Click
4171808..172014 hypothetical; PP_00154 0.0 Click
5172073..172198 hypothetical; PP_00155 0.0 Click
6172198..172824 PHAGE_Aeromo_vB_AsaM_56: putative Dam methylase; PP_00156; phage(gi422937495) 9e-44 Click
7172829..173101 hypothetical protein VC395_1281 [Vibrio cholerae O395] gi|227117630|ref|YP_002819526.1|; PP_00157 2e-05 Click
8173103..174083 PHAGE_Entero_mEp390: hypothetical protein; PP_00158; phage(gi428782706) 9e-22 Click
9174095..174277 hypothetical; PP_00159 0.0 Click
10174278..174976 PHAGE_Entero_HK140: DNA-binding protein; PP_00160; phage(gi428781998) 3e-42 Click
11174970..175131 hypothetical protein VEJY3_09840 [Vibrio sp. EJY3] gi|375265983|ref|YP_005023426.1|; PP_00161 1e-12 Click
12175137..175355 hypothetical; PP_00162 0.0 Click
13175352..175669 hypothetical; PP_00163 0.0 Click
14175666..176172 PHAGE_Pseudo_H105/1: hypothetical protein; PP_00164; phage(gi327198510) 4e-22 Click
15176169..176432 hypothetical; PP_00165 0.0 Click
16176429..176713 PHAGE_Entero_N15: gp57; PP_00166; phage(gi9630522) 2e-20 Click
17176707..177735 PHAGE_Entero_mEp390: hypothetical protein; PP_00167; phage(gi428782709) 4e-43 Click
18complement(177969..178112) hypothetical; PP_00168 0.0 Click
19178214..178882 hypothetical protein VEJY3_09800 [Vibrio sp. EJY3] gi|375265975|ref|YP_005023418.1|; PP_00169 8e-51 Click
20179014..179199 hypothetical; PP_00170 0.0 Click
21179186..179797 PHAGE_Entero_HK225: lysozyme; PP_00171; phage(gi428782444) 3e-48 Click
22179769..180236 PHAGE_Entero_ES18: gp77; PP_00172; phage(gi62362290) 2e-11 Click
23complement(180440..180589) hypothetical; PP_00173 0.0 Click
24complement(180662..180790) hypothetical; PP_00174 0.0 Click
25180980..181126 hypothetical; PP_00175 0.0 Click
26181110..181367 hypothetical; PP_00176 0.0 Click
27181736..182209 PHAGE_Burkho_2: gp1, phage terminase, small subunit, P27 family; PP_00177; phage(gi134288627) 9e-47 Click
28182206..183921 PHAGE_Burkho_phiE125: putative terminase (large subunit); PP_00178; phage(gi17975163) 0.0 Click
29183921..184121 hypothetical; PP_00179 0.0 Click
30184121..185428 PHAGE_Pseudo_D3: portal protein; PP_00180; phage(gi9635589) 1e-164 Click
31185431..186309 PHAGE_Entero_mEp235: head maturation protease; PP_00181; phage(gi428781814) 2e-58 Click
32186314..187501 PHAGE_Pseudo_vB_PaeS_PMG1: major capsid protein; PP_00182; phage(gi374531651) 3e-157 Click
33187574..187843 hypothetical; PP_00183 0.0 Click
34187858..188151 PHAGE_Pseudo_vB_PaeS_PMG1: putative head-tail connector protein; PP_00184; phage(gi374531654) 2e-20 Click
35188151..188513 PHAGE_Entero_HK140: hypothetical protein; PP_00185; phage(gi428781948) 3e-08 Click
36188516..188983 PHAGE_Entero_HK140: hypothetical protein; PP_00186; phage(gi428781949) 1e-24 Click
37188980..189348 PHAGE_Entero_HK140: hypothetical protein; PP_00187; phage(gi428781950) 2e-33 Click
38189429..189908 PHAGE_Entero_HK140: major tail subunit; PP_00188; phage(gi428781951) 1e-27 Click
39189920..190435 PHAGE_Entero_HK140: tail assembly chaperone; PP_00189; phage(gi428781952) 2e-17 Click
40190489..190608 hypothetical; PP_00190 0.0 Click
41190620..193436 PHAGE_Xantho_CP1: putative tail length tape measure protein; PP_00191; phage(gi431811013) 6e-103 Click
42193439..193777 PHAGE_Entero_mEp234: minor tail protein M; PP_00192; phage(gi428782269) 5e-30 Click
43193787..194533 PHAGE_Entero_HK140: minor tail protein L; PP_00193; phage(gi428781956) 1e-67 Click
44194535..195317 PHAGE_Burkho_phiE125: putative tail component protein; PP_00194; phage(gi17975180) 4e-47 Click
45complement(195331..196101) PHAGE_Salmon_vB_SemP_Emek: antirepressor; PP_00195; phage(gi399498814) 2e-36 Click
46196520..197059 PHAGE_Salmon_1: putative Lom-like outer membrane protein; PP_00196; phage(gi169257198) 1e-18 Click
47197126..197728 PHAGE_Escher_HK75: tail assembly protein; PP_00197; phage(gi356870696) 4e-44 Click
48197740..201627 PHAGE_Entero_HK140: central tail fiber; PP_00198; phage(gi428781960) 0.0 Click
49201636..201800 hypothetical; PP_00199 0.0 Click
50201793..203193 PHAGE_Salico_CGphi29: hypothetical protein; PP_00200; phage(gi472340194) 2e-40 Click
51203204..203365 hypothetical; PP_00201 0.0 Click
52203430..203711 hypothetical; PP_00202 0.0 Click
53203711..205420 PHAGE_Pectob_ZF40: hypothetical protein; PP_00203; phage(gi422936705) 1e-11 Click
54205420..206826 PHAGE_Klebsi_KP32: tail fiber protein; PP_00204; phage(gi281416315) 7e-11 Click
55207428..208663 PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; PP_00205; phage(gi16130540) 1e-99 Click
56208729..208740 attR    TGGGCTAGATTC 0.0 Click

Region 2, total : 54 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1complement(630146..630883) PHAGE_Aeromo_phiO18P: putative cI repressor; PP_00585; phage(gi148727133) 6e-32 Click
2631036..631260 PHAGE_Escher_D108: Ner; PP_00586; phage(gi281199646) 5e-13 Click
3631272..633275 PHAGE_Escher_D108: DNA transposition protein A; PP_00587; phage(gi281199647) 3e-173 Click
4633302..634246 PHAGE_Escher_D108: DNA transposition protein B; PP_00588; phage(gi281199648) 3e-79 Click
5634281..634478 hypothetical protein VC395_1282 [Vibrio cholerae O395] gi|227117631|ref|YP_002819527.1|; PP_00589 6e-28 Click
6634488..635057 PHAGE_Vibrio_VfO3K6: Vpf497; PP_00590; phage(gi9635474) 9e-05 Click
7635067..635441 hypothetical protein VC395_1280 [Vibrio cholerae O395] gi|227117629|ref|YP_002819525.1|; PP_00591 2e-59 Click
8635407..635604 hypothetical; PP_00592 0.0 Click
9635591..636205 PHAGE_Burkho_KS10: hypothetical protein KS10_gp21; PP_00593; phage(gi198449283) 3e-46 Click
10636215..636487 hypothetical protein VC395_1277 [Vibrio cholerae O395] gi|227117626|ref|YP_002819522.1|; PP_00594 1e-44 Click
11636480..636716 hypothetical protein VC395_1276 [Vibrio cholerae O395] gi|227117625|ref|YP_002819521.1|; PP_00595 8e-29 Click
12636700..636897 hypothetical protein VC395_1275 [Vibrio cholerae O395] gi|227117624|ref|YP_002819520.1|; PP_00596 4e-31 Click
13636894..637115 hypothetical; PP_00597 0.0 Click
14637112..637597 hypothetical protein VC395_1274 [Vibrio cholerae O395] gi|227117623|ref|YP_002819519.1|; PP_00598 9e-66 Click
15637594..637863 PHAGE_Entero_phiEf11: asch domain protein; PP_00599; phage(gi282598726) 8e-15 Click
16637860..638390 PHAGE_Haemop_SuMu: hypothetical protein; PP_00600; phage(gi418489048) 9e-31 Click
17638470..638703 hypothetical protein VC395_1272 [Vibrio cholerae O395] gi|227117621|ref|YP_002819517.1|; PP_00601 2e-41 Click
18638713..639123 hypothetical; PP_00602 0.0 Click
19639125..639670 PHAGE_Escher_D108: hypothetical protein; PP_00603; phage(gi281199659) 1e-26 Click
20639660..640124 hypothetical; PP_00604 0.0 Click
21640202..640618 PHAGE_Escher_D108: GemB; PP_00605; phage(gi281199660) 7e-19 Click
22640703..641260 PHAGE_Pelagi_HTVC008M: hypothetical protein; PP_00606; phage(gi460042628) 1e-17 Click
23641260..641547 hypothetical protein VC395_1267 [Vibrio cholerae O395] gi|227117616|ref|YP_002819512.1|; PP_00607 2e-37 Click
24641523..642122 hypothetical protein VC395_1266 [Vibrio cholerae O395] gi|227117615|ref|YP_002819511.1|; PP_00608 2e-91 Click
25642119..642349 PHAGE_Halomo_1: hypothetical protein HAPgp41; PP_00609; phage(gi167832386) 2e-05 Click
26642349..642651 PHAGE_Escher_D108: hypothetical protein; PP_00610; phage(gi281199668) 9e-08 Click
27642660..642950 PHAGE_Escher_D108: hypothetical protein; PP_00611; phage(gi281199669) 2e-23 Click
28642962..643543 PHAGE_Escher_D108: hypothetical protein; PP_00612; phage(gi281199670) 6e-34 Click
29643544..645109 PHAGE_Escher_D108: hypothetical protein; PP_00613; phage(gi281199671) 2e-128 Click
30645106..646665 PHAGE_Haemop_SuMu: portal protein gp29; PP_00614; phage(gi418489080) 1e-57 Click
31646658..647431 PHAGE_Escher_D108: virion morphogenesis; PP_00615; phage(gi281199673) 2e-34 Click
32647443..647691 hypothetical protein VC395_1258 [Vibrio cholerae O395] gi|227117607|ref|YP_002819503.1|; PP_00616 4e-37 Click
33647688..648200 PHAGE_Entero_RB43: hypothetical protein RB43ORF128w; PP_00617; phage(gi66391579) 6e-31 Click
34complement(648332..648454) hypothetical; PP_00618 0.0 Click
35648622..649545 PHAGE_Pseudo_JBD30: hypothetical protein; PP_00619; phage(gi448244621) 7e-23 Click
36649548..650447 PHAGE_Pseudo_JBD88a: hypothetical protein; PP_00620; phage(gi448244723) 5e-61 Click
37650536..651111 PHAGE_Europe_virus: hypothetical protein; PP_00621; phage(gi388260173) 7e-05 Click
38651117..651551 PHAGE_Escher_D108: hypothetical protein; PP_00622; phage(gi281199680) 9e-08 Click
39651551..652093 PHAGE_Escher_D108: virion morphogenesis protein; PP_00623; phage(gi281199674) 1e-06 Click
40652090..652689 hypothetical protein VC395_1248 [Vibrio cholerae O395] gi|227117597|ref|YP_002819493.1|; PP_00624 3e-110 Click
41652703..652957 hypothetical protein VC395_1247 [Vibrio cholerae O395] gi|227117596|ref|YP_002819492.1|; PP_00625 2e-24 Click
42652960..654444 PHAGE_Escher_D108: tail sheath protein; PP_00626; phage(gi281199683) 2e-95 Click
43654459..654812 PHAGE_Escher_D108: tail tube protein; PP_00627; phage(gi281199684) 4e-05 Click
44654812..655156 PHAGE_Escher_D108: hypothetical protein; PP_00628; phage(gi281199685) 2e-13 Click
45655161..655298 hypothetical; PP_00629 0.0 Click
46655282..657069 PHAGE_Salmon_ST64B: tail protein; PP_00630; phage(gi23505460) 1e-05 Click
47657081..658400 PHAGE_Escher_D108: DNA circularization protein; PP_00631; phage(gi281199688) 5e-21 Click
48658393..659469 PHAGE_Escher_D108: baseplate assembly protein; PP_00632; phage(gi281199689) 1e-48 Click
49659469..660083 PHAGE_Escher_D108: baseplate assembly protein; PP_00633; phage(gi281199690) 2e-25 Click
50660086..660535 PHAGE_Escher_D108: hypothetical protein; PP_00634; phage(gi281199691) 4e-19 Click
51660525..661592 PHAGE_Escher_D108: hypothetical protein; PP_00635; phage(gi281199692) 8e-46 Click
52661577..662164 PHAGE_Escher_D108: hypothetical protein; PP_00636; phage(gi281199693) 9e-16 Click
53662164..663147 PHAGE_Edward_MSW_3: putative tail-fiber protein; PP_00637; phage(gi448261066) 3e-05 Click
54663147..663623 PHAGE_Vibrio_ICP1: hypothetical protein; PP_00638; phage(gi325171035) 2e-23 Click

Region 3, total : 17 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1complement(1933693..1935039) PHAGE_Vibrio_CTX: RstB; PP_01810; phage(gi332672297) 4e-53 Click
2complement(1935041..1936120) PHAGE_Vibrio_CTX: RstA; PP_01811; phage(gi332672300) 0.0 Click
31936252..1936587 PHAGE_Vibrio_CTX: RstR; PP_01812; phage(gi332672299) 2e-08 Click
4complement(1937566..1938342) PHAGE_Vibrio_CTX: CtxA; PP_01813; phage(gi332672306) 7e-154 Click
5complement(1938442..1938876) PHAGE_Vibrio_CTX: Zot; PP_01814; phage(gi332672305) 1e-76 Click
6complement(1939038..1939643) PHAGE_Vibrio_CTX: Zot; PP_01815; phage(gi332672305) 2e-115 Click
7complement(1939640..1939924) PHAGE_Vibrio_CTX: Ace; PP_01816; phage(gi332672304) 1e-49 Click
8complement(1939930..1940991) PHAGE_Vibrio_CTX: hypothetical protein; PP_01818; phage(gi332672303) 0.0 Click
91940993..1941112 hypothetical; PP_01817 0.0 Click
10complement(1941224..1941472) PHAGE_Vibrio_CTX: Cep; PP_01819; phage(gi332672302) 8e-38 Click
11complement(1941608..1941964) PHAGE_Vibrio_CTX: RstB; PP_01820; phage(gi332672301) 3e-64 Click
12complement(1941966..1943045) PHAGE_Vibrio_CTX: RstA; PP_01821; phage(gi332672300) 0.0 Click
131943177..1943512 PHAGE_Vibrio_CTX: RstR; PP_01822; phage(gi332672299) 2e-08 Click
14complement(1944044..1944355) hypothetical protein VC395_1599 [Vibrio cholerae O395] gi|227117945|ref|YP_002819841.1|; PP_01823 1e-52 Click
15complement(1944514..1944837) hypothetical protein VC395_1600 [Vibrio cholerae O395] gi|227117946|ref|YP_002819842.1|; PP_01824 1e-53 Click
16complement(1944851..1945300) hypothetical protein VC395_1601 [Vibrio cholerae O395] gi|227117947|ref|YP_002819843.1|; PP_01825 4e-81 Click
171945464..1947113 PHAGE_Cafete_BV_PW1: putative Lon protease; PP_01826; phage(gi310831468) 3e-05 Click

Region 4, total : 6 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1complement(2991470..2992222) PROPHAGE_Escher_MG1655: IS4 transposase; PP_02821; phage(gi16132099) 2e-68 Click
2complement(2992349..2993881) PHAGE_Acanth_moumouvirus: asparaginyl t-RNA synthetase; PP_02822; phage(gi441432571) 1e-09 Click
3complement(2993912..2994811) PHAGE_Pseudo_73: hypothetical protein ORF037; PP_02823; phage(gi148912865) 8e-09 Click
4complement(2995180..2996493) PHAGE_Lactob_Lj771: minor tail protein gp26-like protein; PP_02824; phage(gi163932195) 9e-07 Click
52996802..2997524 PHAGE_Parame_NY2A: hypothetical protein NY2A_B016L; PP_02825; phage(gi157952320) 1e-08 Click
62997612..2998883 PHAGE_Cafete_BV_PW1: putative superfamily II helicase/eIF-4AIII; PP_02826; phage(gi310831360) 7e-44 Click

Region 5, total : 6 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1complement(3109567..3109902) PHAGE_Bacill_BCD7: 6-pyruvoyl tetrahydrobiopterin synthase; PP_02934; phage(gi422935983) 1e-08 Click
23110370..3112001 PHAGE_Coryne_BFK20: gp15, minor tail protein; PP_02935; phage(gi157168388) 4e-05 Click
33112148..3113359 PHAGE_Megavi_lba: asparaginyl-tRNA synthetase; PP_02936; phage(gi448825735) 2e-62 Click
43113334..3113549 PHAGE_Acanth_moumouvirus: asparaginyl t-RNA synthetase; PP_02937; phage(gi441432571) 1e-15 Click
5complement(3113601..3114923) PROPHAGE_Escher_MG1655: IS4 transposase; PP_02938; phage(gi16132099) 3e-136 Click
6complement(3115050..3116078) PHAGE_Parame_AR158: hypothetical protein AR158_C413R; PP_02939; phage(gi157953603) 7e-09 Click
7complement(3116098..3117216) PHAGE_Megavi_lba: UDP-N-acetylglucosamine 2-epimerase; PP_02940; phage(gi448825506) 2e-28 Click