Streptococcus suis 89/1591 whole genome shotgun sequence. [asmbl_id: NC_000000].2143253, GC%: 41.05%



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            Hits against Virus and prophage DB
             Hits against Bacterial DB or GenBank file

Region 1, total : 22 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1789892..789906 attL    GAAACATTGATATTT 0.0 Click
2complement(803746..804183) PHAGE_Strept_3: hypothetical protein SpyM3_1124; SsuiDRAFT_4076; phage(gi28876294) 4e-08 Click
3complement(804624..805127) conserved hypothetical protein; SsuiDRAFT_4077 0.0 Click
4complement(805169..805570) conserved hypothetical protein; SsuiDRAFT_4078 0.0 Click
5complement(805620..806162) phage protein; SsuiDRAFT_4079 0.0 Click
6complement(806183..806356) conserved hypothetical protein; SsuiDRAFT_4080 0.0 Click
7complement(806701..808143) PHAGE_Lactoc_bIL310: helicase; SsuiDRAFT_4081; phage(gi13095886) 5e-62 Click
8complement(808197..809066) PHAGE_Strept_5: hypothetical protein SpyM3_1341; SsuiDRAFT_4082; phage(gi28876423) 5e-12 Click
9complement(809050..809160) hypothetical protein; SsuiDRAFT_4083 0.0 Click
10complement(809289..809573) PHAGE_Lactoc_bIL310: hypothetical protein bIL310p19; SsuiDRAFT_4084; phage(gi13095880) 5e-06 Click
11complement(809563..809901) phage protein; SsuiDRAFT_4085 0.0 Click
12complement(809898..810047) hypothetical protein; SsuiDRAFT_4086 0.0 Click
13complement(810059..810262) hypothetical protein; SsuiDRAFT_4087 0.0 Click
14complement(810250..810651) hypothetical protein; SsuiDRAFT_4088 0.0 Click
15complement(811107..811730) PHAGE_Lactoc_bIL311: Orf3; SsuiDRAFT_4089; phage(gi13095661) 2e-28 Click
16complement(811742..811948) PHAGE_Lactoc_bIL311: repressor; SsuiDRAFT_4090; phage(gi13095660) 9e-10 Click
17complement(811966..812166) PHAGE_Lactoc_bIL311: ps3 protein 14-like transcriptional regulator; SsuiDRAFT_4091; phage(gi19343481) 2e-11 Click
18812370..812876 PHAGE_Strept_858: orf44; SsuiDRAFT_4092; phage(gi168229317) 2e-13 Click
19813263..814267 conserved hypothetical protein; SsuiDRAFT_4093 0.0 Click
20814497..815669 PHAGE_Lactoc_bIL311: integrase; SsuiDRAFT_4094; phage(gi13095659) 2e-59 Click
21815807..816190 S4 domain protein YaaA; SsuiDRAFT_4095 0.0 Click
22816193..817287 DNA replication and repair protein RecF; SsuiDRAFT_4096 0.0 Click
23817425..817439 attR    GAAACATTGATATTT 0.0 Click
24complement(817728..818930) PROPHAGE_Escher_CFT073: transposase; SsuiDRAFT_4097; phage(gi26248352) 8e-13 Click

Region 2, total : 58 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
11071254..1071265 attL    GTTTTTTTATAT 0.0 Click
21071545..1071556 attL    TATTTTTTAAAA 0.0 Click
3complement(1085304..1086971) PHAGE_Strept_Dp_1: DnaX DNA polymerase III clamp loader complex gamma-tau-delta subunit; SsuiDRAFT_2974; phage(gi327198331) 7e-50 Click
4complement(1086971..1087332) conserved hypothetical protein; SsuiDRAFT_2975 0.0 Click
5complement(1087333..1087584) conserved hypothetical protein; SsuiDRAFT_3988 0.0 Click
6complement(1087588..1087932) PHAGE_Strept_SMP: hypothetical protein; SsuiDRAFT_3989; phage(gi119953750) 7e-63 Click
7complement(1087935..1088144) PHAGE_Strept_SMP: hypothetical protein; SsuiDRAFT_3990; phage(gi119953749) 4e-26 Click
8complement(1088153..1093084) PHAGE_Lactob_Lj965: hypothetical protein Ljo_0324; SsuiDRAFT_3991; phage(gi41179262) 2e-54 Click
9complement(1093086..1093436) PHAGE_Lactob_Lj965: hypothetical protein Ljo_0323; SsuiDRAFT_3992; phage(gi41179261) 8e-22 Click
10complement(1093446..1096583) PHAGE_Lactoc_bIBB29: putative tail tape measure protein; SsuiDRAFT_3993; phage(gi194097535) 5e-28 Click
11complement(1096994..1097368) PHAGE_Lactob_Lj965: hypothetical protein Ljo_0320; SsuiDRAFT_3994; phage(gi41179250) 3e-11 Click
12complement(1097379..1097795) PHAGE_Lactob_Lj965: putative major tail protein; SsuiDRAFT_3995; phage(gi41179249) 6e-10 Click
13complement(1097799..1098167) PHAGE_Lactob_Lj965: hypothetical protein Ljo_0318; SsuiDRAFT_3996; phage(gi41179248) 2e-05 Click
14complement(1098164..1098676) PHAGE_Lactob_Lj965: hypothetical protein Ljo_0317; SsuiDRAFT_3997; phage(gi41179258) 8e-10 Click
15complement(1098664..1098987) PHAGE_Brocho_BL3: gp11; SsuiDRAFT_3998; phage(gi327409401) 2e-08 Click
16complement(1098944..1099273) PHAGE_Lactob_Lj965: hypothetical protein Ljo_0315; SsuiDRAFT_3999; phage(gi41179246) 2e-06 Click
17complement(1099283..1099471) hypothetical protein; SsuiDRAFT_4000 0.0 Click
18complement(1099482..1100498) PHAGE_Staphy_CNPH82: conserved phage protein; SsuiDRAFT_4001; phage(gi119953686) 8e-87 Click
19complement(1100516..1101037) PHAGE_Lactob_Lj965: putative scaffold protein; SsuiDRAFT_4002; phage(gi41179243) 3e-16 Click
20complement(1101201..1101491) PHAGE_Brocho_NF5: gp56; SsuiDRAFT_4003; phage(gi327197641) 1e-16 Click
21complement(1101503..1101739) PHAGE_Strept_SMP: hypothetical protein; SsuiDRAFT_4004; phage(gi119953782) 2e-11 Click
221101997..1102533 PROPHAGE_Ralsto_GMI1000: ISRSO11-transposase ORFA protein; SsuiDRAFT_4005; phage(gi17546156) 2e-09 Click
231102509..1103348 PROPHAGE_Escher_MG1655: IS150 transposase B; SsuiDRAFT_4006; phage(gi16131429) 1e-70 Click
24complement(1103397..1103597) PHAGE_Strept_SM1: gp36; SsuiDRAFT_4007; phage(gi32469467) 8e-20 Click
25complement(1103566..1105035) PHAGE_Strept_1: minor head protein; SsuiDRAFT_4008; phage(gi39653715) 2e-65 Click
26complement(1104986..1106434) PHAGE_Lactob_Lj965: putative portal protein; SsuiDRAFT_4009; phage(gi41179240) 4e-59 Click
27complement(1106447..1107868) PHAGE_Lactoc_1: TerL; SsuiDRAFT_4010; phage(gi13786562) 7e-167 Click
28complement(1107858..1108259) conserved hypothetical protein; SsuiDRAFT_4011 0.0 Click
29complement(1108506..1108579) tRNA 0.0 Click
30complement(1108739..1109161) PHAGE_Strept_5: hypothetical protein SpyM3_1330; SsuiDRAFT_4012; phage(gi28876412) 1e-46 Click
31complement(1109237..1109506) hypothetical protein; SsuiDRAFT_4013 0.0 Click
32complement(1109507..1109710) hypothetical protein; SsuiDRAFT_4014 0.0 Click
33complement(1109707..1109916) hypothetical protein; SsuiDRAFT_4015 0.0 Click
34complement(1110133..1110294) hypothetical protein; SsuiDRAFT_4016 0.0 Click
35complement(1110294..1110506) hypothetical protein; SsuiDRAFT_4017 0.0 Click
36complement(1110506..1111081) PHAGE_Temper_1: hypothetical protein phiNIH1.1_21; SsuiDRAFT_4018; phage(gi16271797) 6e-21 Click
37complement(1111092..1111517) conserved hypothetical protein; SsuiDRAFT_4019 0.0 Click
38complement(1111517..1112776) PHAGE_Strept_2: hypothetical protein SpyM3_0951; SsuiDRAFT_4020; phage(gi28876235) 1e-23 Click
39complement(1112773..1113075) PHAGE_Strept_SMP: hypothetical protein; SsuiDRAFT_4021; phage(gi119953773) 6e-17 Click
40complement(1113072..1113302) PHAGE_Strept_5: hypothetical protein SpyM3_1336; SsuiDRAFT_4022; phage(gi28876418) 2e-25 Click
41complement(1113299..1113619) PHAGE_Strept_YMC_2011: phage protein; SsuiDRAFT_4023; phage(gi399498704) 2e-38 Click
42complement(1113871..1115424) PHAGE_Strept_YMC_2011: putative primase; SsuiDRAFT_4024; phage(gi399498703) 0.0 Click
43complement(1115399..1116205) PHAGE_Strept_YMC_2011: phage protein; SsuiDRAFT_4025; phage(gi399498702) 5e-105 Click
44complement(1116210..1116680) PHAGE_Strept_858: orf38; SsuiDRAFT_4026; phage(gi168229311) 5e-61 Click
45complement(1116683..1118095) PHAGE_Strept_858: orf37; SsuiDRAFT_4027; phage(gi168229310) 0.0 Click
46complement(1118064..1118753) PHAGE_Strept_858: orf36; SsuiDRAFT_4028; phage(gi168229309) 4e-117 Click
47complement(1118750..1119226) PHAGE_Strept_5: hypothetical protein SpyM3_1345; SsuiDRAFT_4029; phage(gi28876427) 1e-44 Click
48complement(1119228..1119416) hypothetical protein; SsuiDRAFT_4030 0.0 Click
49complement(1119413..1119757) PHAGE_Strept_SMP: hypothetical protein; SsuiDRAFT_4031; phage(gi119953758) 4e-11 Click
50complement(1119890..1120039) hypothetical protein; SsuiDRAFT_4032 0.0 Click
51complement(1120029..1120277) hypothetical protein; SsuiDRAFT_4033 0.0 Click
52complement(1120318..1120572) PHAGE_Strept_phi3396: hypothetical protein phi3396_09; SsuiDRAFT_4034; phage(gi126011071) 1e-17 Click
53complement(1120639..1120836) PHAGE_Strept_PH15: hypothetical protein phiPH15_gp10; SsuiDRAFT_4035; phage(gi190151425) 8e-15 Click
541121061..1121309 hypothetical protein; SsuiDRAFT_4036 0.0 Click
55complement(1121296..1121415) hypothetical protein; SsuiDRAFT_4037 0.0 Click
561121472..1121483 attR    TATTTTTTAAAA 0.0 Click
57complement(1121486..1121686) PHAGE_Strept_3: putative Cro-like repressor protein; SsuiDRAFT_4038; phage(gi28876312) 7e-13 Click
581121871..1122251 PHAGE_Strept_TP_J34: putative CI repressor homolog; SsuiDRAFT_4039; phage(gi444475878) 3e-23 Click
591122258..1122662 PHAGE_Temper_1: hypothetical protein phiNIH1.1_03; SsuiDRAFT_4040; phage(gi16271779) 7e-40 Click
601122659..1123555 Abi family protein; SsuiDRAFT_4041 0.0 Click
611123840..1124997 PHAGE_Strept_1: putative integrase; SsuiDRAFT_4042; phage(gi28876146) 4e-95 Click
621125158..1125169 attR    GTTTTTTTATAT 0.0 Click
631125227..1126153 PHAGE_Lactoc_P087: putative cysteine synthase; SsuiDRAFT_4043; phage(gi229605000) 5e-97 Click

Region 3, total : 48 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1complement(1458176..1463260) PROPHAGE_Deinoc_R1: serine protease; SsuiDRAFT_2690; phage(gi15808000) 5e-07 Click
2complement(1463404..1463595) NusG antitermination factor; SsuiDRAFT_2691 0.0 Click
3complement(1463802..1464074) hypothetical protein; SsuiDRAFT_2731 0.0 Click
4complement(1464052..1464789) PHAGE_Strept_TP_J34: putative minor tail protein; contains lysozyme and Chap domain; SsuiDRAFT_2732; phage(gi444475919) 2e-21 Click
5complement(1464773..1465123) PHAGE_Strept_MM1: putative holin 2; SsuiDRAFT_2733; phage(gi15088792) 3e-29 Click
6complement(1465126..1465425) conserved hypothetical protein; SsuiDRAFT_2734 0.0 Click
7complement(1465429..1465773) PHAGE_Strept_SMP: hypothetical protein; SsuiDRAFT_2735; phage(gi119953750) 7e-61 Click
8complement(1465776..1465994) PHAGE_Strept_SMP: hypothetical protein; SsuiDRAFT_2736; phage(gi119953749) 2e-24 Click
9complement(1466003..1471270) PHAGE_Strept_3: putative platelet-binding protein; SsuiDRAFT_2737; phage(gi28876272) 9e-107 Click
10complement(1471267..1471962) PHAGE_Strept_3: hypothetical protein SpyM3_1103; SsuiDRAFT_2738; phage(gi28876273) 8e-44 Click
11complement(1471962..1474544) PHAGE_Strept_3: putative human platelet-binding protein; SsuiDRAFT_2739; phage(gi28876274) 8e-165 Click
12complement(1474534..1474917) PHAGE_Strept_3: hypothetical protein SpyM3_1105; SsuiDRAFT_2740; phage(gi28876275) 4e-38 Click
13complement(1474914..1475192) PHAGE_Strept_3: hypothetical protein SpyM3_1106; SsuiDRAFT_2741; phage(gi28876276) 1e-19 Click
14complement(1475203..1475790) PHAGE_Strept_3: putative structural protein; SsuiDRAFT_2742; phage(gi28876277) 3e-61 Click
15complement(1475806..1476141) PHAGE_Strept_3: hypothetical protein SpyM3_1108; SsuiDRAFT_2743; phage(gi28876278) 8e-33 Click
16complement(1476138..1476377) PHAGE_Strept_3: hypothetical protein SpyM3_1109; SsuiDRAFT_2744; phage(gi28876279) 2e-24 Click
17complement(1476370..1476708) PHAGE_Strept_3: hypothetical protein SpyM3_1110; SsuiDRAFT_2745; phage(gi28876280) 1e-39 Click
18complement(1476695..1477090) PHAGE_Strept_3: hypothetical protein SpyM3_1111; SsuiDRAFT_2746; phage(gi28876281) 5e-46 Click
19complement(1477094..1477318) PHAGE_Strept_3: hypothetical protein SpyM3_1112; SsuiDRAFT_2747; phage(gi28876282) 3e-07 Click
20complement(1477320..1478222) PHAGE_Strept_3: putative structural protein; SsuiDRAFT_2748; phage(gi28876283) 6e-115 Click
21complement(1478237..1478707) PHAGE_Strept_3: hypothetical protein SpyM3_1114; SsuiDRAFT_2749; phage(gi28876284) 1e-42 Click
22complement(1478790..1480205) PHAGE_Strept_3: putative terminase; SsuiDRAFT_2750; phage(gi28876285) 0.0 Click
23complement(1480350..1480481) conserved hypothetical protein; SsuiDRAFT_2751 0.0 Click
24complement(1480550..1480762) hypothetical protein; SsuiDRAFT_2752 0.0 Click
25complement(1480759..1481838) PHAGE_Strept_3: hypothetical protein SpyM3_1120; SsuiDRAFT_2753; phage(gi28876290) 1e-80 Click
26complement(1481831..1483096) PHAGE_Strept_3: putative structural protein; SsuiDRAFT_2754; phage(gi28876291) 0.0 Click
27complement(1483093..1483455) PHAGE_Strept_3: hypothetical protein SpyM3_1122; SsuiDRAFT_2755; phage(gi28876292) 5e-30 Click
28complement(1483534..1483881) PHAGE_Strept_3: hypothetical protein SpyM3_1123; SsuiDRAFT_2756; phage(gi28876293) 5e-43 Click
29complement(1483978..1484412) PHAGE_Strept_3: hypothetical protein SpyM3_1124; SsuiDRAFT_2757; phage(gi28876294) 1e-59 Click
30complement(1484489..1484740) PHAGE_Strept_3: hypothetical protein SpyM3_1125; SsuiDRAFT_2758; phage(gi28876295) 3e-20 Click
31complement(1484752..1485021) conserved hypothetical protein; SsuiDRAFT_2759 0.0 Click
32complement(1485021..1485197) hypothetical protein; SsuiDRAFT_2760 0.0 Click
33complement(1485197..1485430) PHAGE_Strept_DT1: hypothetical protein DT1p40; SsuiDRAFT_2761; phage(gi9632457) 9e-10 Click
34complement(1485446..1485748) PHAGE_Strept_3: hypothetical protein SpyM3_1127; SsuiDRAFT_2762; phage(gi28876297) 2e-25 Click
35complement(1485758..1486276) PHAGE_Strept_3: hypothetical protein SpyM3_1128; SsuiDRAFT_2763; phage(gi28876298) 2e-82 Click
36complement(1486273..1486605) PHAGE_Strept_3: hypothetical protein SpyM3_1129; SsuiDRAFT_2764; phage(gi28876299) 4e-38 Click
37complement(1486695..1486904) hypothetical protein; SsuiDRAFT_2765 0.0 Click
38complement(1486918..1487292) hypothetical protein; SsuiDRAFT_2766 0.0 Click
39complement(1487320..1487781) PHAGE_Strept_phiNJ2: putative single-strand binding protein; SsuiDRAFT_2767; phage(gi414090245) 2e-64 Click
40complement(1487774..1487881) hypothetical protein; SsuiDRAFT_2768 0.0 Click
41complement(1487884..1488063) PHAGE_Strept_MM1: hypothetical protein MM1p25; SsuiDRAFT_2769; phage(gi15088766) 1e-06 Click
42complement(1488053..1488379) hypothetical protein; SsuiDRAFT_2770 0.0 Click
43complement(1488389..1488658) hypothetical protein; SsuiDRAFT_2771 0.0 Click
44complement(1488661..1489574) PHAGE_Strept_M102: hypothetical protein M102_gp28; SsuiDRAFT_2772; phage(gi242345599) 8e-64 Click
45complement(1489575..1490246) N-acylglucosamine-6-phosphate 2-epimerase; SsuiDRAFT_2410 0.0 Click
46complement(1490645..1491202) alkylhydroperoxidase like protein, AhpD family; SsuiDRAFT_2411 0.0 Click
47complement(1491368..1492063) HAD-superfamily hydrolase, subfamily IA, variant 1; SsuiDRAFT_2412 0.0 Click
48complement(1492117..1493856) PHAGE_Bacill_SPBc2: ABC transporter; SsuiDRAFT_2413; phage(gi9630145) 4e-30 Click

Region 4, total : 21 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
11914935..1914948 attL    ATAACAAAAAAATC 0.0 Click
2complement(1916308..1917087) PHAGE_Plankt_PaV_LD: ABC transporter; SsuiDRAFT_2302; phage(gi371496158) 4e-12 Click
31917220..1918557 protein of unknown function DUF21; SsuiDRAFT_2303 0.0 Click
41918678..1919222 PHAGE_Vibrio_ICP1: anaerobic ribonucleotide reductase-activating protein; SsuiDRAFT_2304; phage(gi325171080) 5e-06 Click
5complement(1919223..1919989) PHAGE_Lister_B054: gp50; SsuiDRAFT_2239; phage(gi157325334) 1e-38 Click
6complement(1919986..1920189) PHAGE_Strept_1: hypothetical protein EJ-1p20; SsuiDRAFT_2240; phage(gi39653694) 8e-17 Click
7complement(1920165..1920293) PHAGE_Strept_1: hypothetical protein EJ-1p19; SsuiDRAFT_2241; phage(gi39653693) 3e-05 Click
8complement(1920678..1921043) PHAGE_Strept_phiNJ2: hypothetical protein; SsuiDRAFT_2242; phage(gi414090252) 6e-26 Click
9complement(1921096..1921320) hypothetical protein; SsuiDRAFT_2243 0.0 Click
10complement(1921301..1921558) hypothetical protein; SsuiDRAFT_2244 0.0 Click
11complement(1921555..1921830) PHAGE_Strept_TP_J34: hypothetical protein; SsuiDRAFT_2245; phage(gi444475881) 1e-15 Click
12complement(1921908..1922375) PHAGE_Staphy_55: ORF029; SsuiDRAFT_2246; phage(gi66396142) 4e-06 Click
13complement(1922440..1923150) PHAGE_Strept_TP_J34: putative antirepressor; SsuiDRAFT_2247; phage(gi444475880) 3e-104 Click
141923225..1923428 hypothetical protein; SsuiDRAFT_2248 0.0 Click
15complement(1923397..1923570) hypothetical protein; SsuiDRAFT_2249 0.0 Click
16complement(1923584..1923805) hypothetical protein; SsuiDRAFT_2250 0.0 Click
17complement(1923841..1924026) PHAGE_Staphy_29: ORF049; SsuiDRAFT_2251; phage(gi66396236) 1e-12 Click
181924104..1924823 conserved hypothetical protein; SsuiDRAFT_2252 0.0 Click
19complement(1924820..1924972) PHAGE_Strept_SM1: gp6; SsuiDRAFT_2253; phage(gi32469437) 3e-05 Click
201925158..1925913 PHAGE_Strept_PH15: putative transcriptional repressor; SsuiDRAFT_2254; phage(gi190151419) 2e-54 Click
211926089..1926523 transcriptional modulator of MazE/toxin, MazF; SsuiDRAFT_2255 0.0 Click
221926520..1926533 attR    ATAACAAAAAAATC 0.0 Click
231926649..1927743 PHAGE_Strept_TP_J34: integrase; SsuiDRAFT_2256; phage(gi444475875) 1e-73 Click

Region 5, total : 14 CDS.
#CDS_POSITIONBLAST_HITE-VALUESEQUENCE
1complement(2004764..2005642) PHAGE_Amsact_: putative ATP-binding cassette transporter; SsuiDRAFT_2202; phage(gi9964444) 2e-19 Click
22005968..2007257 transposase IS4 family protein; SsuiDRAFT_2203 0.0 Click
3complement(2007410..2007928) PHAGE_Lactob_1: DNA-binding ferritin-like protein; SsuiDRAFT_2204; phage(gi226377691) 2e-11 Click
42008087..2008596 hypothetical protein; SsuiDRAFT_2275 0.0 Click
52008593..2010191 PHAGE_Staphy_PT1028: ORF012; SsuiDRAFT_2276; phage(gi66395176) 6e-06 Click
62010531..2010704 conserved hypothetical protein; SsuiDRAFT_2277 0.0 Click
72010725..2011267 phage protein; SsuiDRAFT_2278 0.0 Click
82011534..2011938 PHAGE_Strept_P9: transcriptional activator; SsuiDRAFT_2279; phage(gi157311159) 7e-21 Click
92011972..2012376 PHAGE_Strept_5: hypothetical protein SpyM3_1330; SsuiDRAFT_2280; phage(gi28876412) 6e-13 Click
102012908..2014161 PHAGE_Acanth_moumouvirus: putative Zn-dependent peptidase; SsuiDRAFT_2281; phage(gi441432193) 6e-05 Click
112014158..2015441 PHAGE_Acanth_mimivirus: putative zinc protease; SsuiDRAFT_2282; phage(gi311977609) 2e-18 Click
122015523..2016380 PHAGE_Equid_8: envelope glycoprotein J; SsuiDRAFT_2283; phage(gi386522795) 7e-06 Click
132016390..2016517 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; SsuiDRAFT_2284 0.0 Click
142016518..2018219 PHAGE_Cyprin_2: membrane protein ORF25D; SsuiDRAFT_2139; phage(gi422933804) 6e-09 Click